RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 ARL6IP6Q8N6S5 226 aa6.72□□□□□ -1.33
CCDC58-201ENST00000291458 RASL10AQ92737 203 aa6.72□□□□□ -1.33
CCDC58-201ENST00000291458 hCG_2014768A0A024R1R8 64 aa6.71□□□□□ -1.34
CCDC58-201ENST00000291458 TMSB15BA0A087X1C1 80 aa6.71□□□□□ -1.34
CCDC58-201ENST00000291458 FBLL1A6NHQ2 334 aaKnown RBP6.71□□□□□ -1.34
CCDC58-201ENST00000291458 H3BVH4 76 aa6.71□□□□□ -1.34
CCDC58-201ENST00000291458 K7EQD1 137 aa6.71□□□□□ -1.34
CCDC58-201ENST00000291458 PAGE4O60829 102 aa6.71□□□□□ -1.34
CCDC58-201ENST00000291458 ORM1P02763 201 aa6.71□□□□□ -1.34
CCDC58-201ENST00000291458 S100A4P26447 101 aaKnown RBP6.71□□□□□ -1.34
CCDC58-201ENST00000291458 ZNF345Q14585 488 aa6.71□□□□□ -1.34
CCDC58-201ENST00000291458 MRPL23Q16540 153 aaKnown RBP6.71□□□□□ -1.34
CCDC58-201ENST00000291458 ZNF876PQ49A33 203 aa6.71□□□□□ -1.34
CCDC58-201ENST00000291458 ZNF506Q5JVG8 444 aa6.71□□□□□ -1.34
CCDC58-201ENST00000291458 DPPA3Q6W0C5 159 aa6.71□□□□□ -1.34
CCDC58-201ENST00000291458 STOML3Q8TAV4 291 aa6.71□□□□□ -1.34
CCDC58-201ENST00000291458 SFT2D1Q8WV19 159 aa6.71□□□□□ -1.34
CCDC58-201ENST00000291458 UPK3BQ9BT76 320 aa6.71□□□□□ -1.34
CCDC58-201ENST00000291458 GRIFINA4D1Z8 144 aa6.7□□□□□ -1.34
CCDC58-201ENST00000291458 PGPEP1LA6NFU8 196 aa6.7□□□□□ -1.34
CCDC58-201ENST00000291458 SIVA1O15304 175 aa6.7□□□□□ -1.34
CCDC58-201ENST00000291458 SH2D1AO60880 128 aa6.7□□□□□ -1.34
CCDC58-201ENST00000291458 ASIPP42127 132 aa6.7□□□□□ -1.34
CCDC58-201ENST00000291458 LINC00315P59091 139 aa6.7□□□□□ -1.34
CCDC58-201ENST00000291458 SLAQ13239 276 aa6.7□□□□□ -1.34
CCDC58-201ENST00000291458 SAPCD1Q5SSQ6 148 aa6.7□□□□□ -1.34
CCDC58-201ENST00000291458 NEGR1Q7Z3B1 354 aa6.7□□□□□ -1.34
CCDC58-201ENST00000291458 WFDC10BQ8IUB3 73 aa6.7□□□□□ -1.34
CCDC58-201ENST00000291458 ZC2HC1AQ96GY0 325 aa6.7□□□□□ -1.34
CCDC58-201ENST00000291458 C9orf85Q96MD7 179 aa6.7□□□□□ -1.34
CCDC58-201ENST00000291458 IGKV3D-20A0A0C4DH25 116 aa6.69□□□□□ -1.34
CCDC58-201ENST00000291458 A0A0D9SG52 128 aa6.69□□□□□ -1.34
CCDC58-201ENST00000291458 C16orf90A8MZG2 172 aa6.69□□□□□ -1.34
CCDC58-201ENST00000291458 B4DEV8 164 aa6.69□□□□□ -1.34
CCDC58-201ENST00000291458 RNASE3P12724 160 aaKnown RBP6.69□□□□□ -1.34
CCDC58-201ENST00000291458 GATA1P15976 413 aaPredicted RBP6.69□□□□□ -1.34
CCDC58-201ENST00000291458 LGALSLQ3ZCW2 172 aaPredicted RBP6.69□□□□□ -1.34
CCDC58-201ENST00000291458 CFAP126Q5VTH2 177 aa6.69□□□□□ -1.34
CCDC58-201ENST00000291458 LYPD5Q6UWN5 251 aa6.69□□□□□ -1.34
CCDC58-201ENST00000291458 TMUB2Q71RG4 321 aa6.69□□□□□ -1.34
CCDC58-201ENST00000291458 TXNDC17Q9BRA2 123 aa6.69□□□□□ -1.34
CCDC58-201ENST00000291458 TNFRSF18Q9Y5U5 241 aa6.69□□□□□ -1.34
CCDC58-201ENST00000291458 HMSDA8MTL9 139 aa6.68□□□□□ -1.34
CCDC58-201ENST00000291458 ZNF561-AS1K7EIQ3 104 aa6.68□□□□□ -1.34
CCDC58-201ENST00000291458 SEC11BP0C7V7 166 aa6.68□□□□□ -1.34
CCDC58-201ENST00000291458 TPT1P13693 172 aaKnown RBP6.68□□□□□ -1.34
CCDC58-201ENST00000291458 FUSP35637 526 aaKnown RBP eCLIP6.68□□□□□ -1.34
CCDC58-201ENST00000291458 SPATA12Q7Z6I5 190 aa6.68□□□□□ -1.34
CCDC58-201ENST00000291458 HIST1H2BAQ96A08 127 aa6.68□□□□□ -1.34
CCDC58-201ENST00000291458 FMC1Q96HJ9 113 aa6.68□□□□□ -1.34
CCDC58-201ENST00000291458 JPT2Q9H910 190 aa6.68□□□□□ -1.34
CCDC58-201ENST00000291458 FABP5P3A8MUU1 101 aa6.67□□□□□ -1.34
CCDC58-201ENST00000291458 RS1O15537 224 aa6.67□□□□□ -1.34
CCDC58-201ENST00000291458 FAM162BQ5T6X4 162 aa6.67□□□□□ -1.34
CCDC58-201ENST00000291458 FAM74A4Q5TZK3 123 aa6.67□□□□□ -1.34
CCDC58-201ENST00000291458 PRR27Q6MZM9 219 aa6.67□□□□□ -1.34
CCDC58-201ENST00000291458 SLC25A29Q8N8R3 303 aa6.67□□□□□ -1.34
CCDC58-201ENST00000291458 PRADC1Q9BSG0 188 aa6.67□□□□□ -1.34
CCDC58-201ENST00000291458 NKX6-2Q9C056 277 aaPredicted RBP6.67□□□□□ -1.34
CCDC58-201ENST00000291458 LY96Q9Y6Y9 160 aa6.67□□□□□ -1.34
CCDC58-201ENST00000291458 DNAH10Q8IVF4 4471 aa6.66□□□□□ -1.34
CCDC58-201ENST00000291458 A0A1W2PPQ1 181 aa6.66□□□□□ -1.34
CCDC58-201ENST00000291458 GAGE12JA6NER3 117 aa6.66□□□□□ -1.34
CCDC58-201ENST00000291458 UMAD1C9J7I0 102 aa6.66□□□□□ -1.34
CCDC58-201ENST00000291458 M0R381 172 aa6.66□□□□□ -1.34
CCDC58-201ENST00000291458 CRIP1P50238 77 aa6.66□□□□□ -1.34
CCDC58-201ENST00000291458 EIF5AP63241 154 aaKnown RBP6.66□□□□□ -1.34
CCDC58-201ENST00000291458 RPL19P84098 196 aaKnown RBP6.66□□□□□ -1.34
CCDC58-201ENST00000291458 GAGE1Q13065 139 aa6.66□□□□□ -1.34
CCDC58-201ENST00000291458 GAGE4Q13068 117 aa6.66□□□□□ -1.34
CCDC58-201ENST00000291458 GAGE5Q13069 117 aa6.66□□□□□ -1.34
CCDC58-201ENST00000291458 RHOHQ15669 191 aa6.66□□□□□ -1.34
CCDC58-201ENST00000291458 GAGE13Q4V321 117 aa6.66□□□□□ -1.34
CCDC58-201ENST00000291458 PARLQ9H300 379 aa6.66□□□□□ -1.34
CCDC58-201ENST00000291458 GNG13Q9P2W3 67 aa6.66□□□□□ -1.34
CCDC58-201ENST00000291458 A0A087WWL8 130 aa6.65□□□□□ -1.34
CCDC58-201ENST00000291458 MUC21A0A0G2JKD1 596 aa6.65□□□□□ -1.34
CCDC58-201ENST00000291458 MUC21A0A140T8X8 626 aa6.65□□□□□ -1.34
CCDC58-201ENST00000291458 KRBOX1C9JBD0 128 aa6.65□□□□□ -1.34
CCDC58-201ENST00000291458 LTAP01374 205 aa6.65□□□□□ -1.34
CCDC58-201ENST00000291458 IGHV3-30P01768 117 aa6.65□□□□□ -1.34
CCDC58-201ENST00000291458 IGHV3-33P01772 117 aa6.65□□□□□ -1.34
CCDC58-201ENST00000291458 ARMS2P0C7Q2 107 aa6.65□□□□□ -1.34
CCDC58-201ENST00000291458 DNAH10OSP0CZ25 163 aa6.65□□□□□ -1.34
CCDC58-201ENST00000291458 IGHV3-30-3P0DP02 117 aa6.65□□□□□ -1.34
CCDC58-201ENST00000291458 IGHV3-30-5P0DP03 117 aa6.65□□□□□ -1.34
CCDC58-201ENST00000291458 SSTP61278 116 aa6.65□□□□□ -1.34
CCDC58-201ENST00000291458 OR10J3Q5JRS4 329 aa6.65□□□□□ -1.34
CCDC58-201ENST00000291458 MBD3L1Q8WWY6 194 aa6.65□□□□□ -1.34
CCDC58-201ENST00000291458 SAMD10Q9BYL1 202 aa6.65□□□□□ -1.34
CCDC58-201ENST00000291458 ZFP30Q9Y2G7 519 aa6.65□□□□□ -1.34
CCDC58-201ENST00000291458 CRYGDP07320 174 aa6.64□□□□□ -1.35
CCDC58-201ENST00000291458 EVI2AP22794 236 aa6.64□□□□□ -1.35
CCDC58-201ENST00000291458 KRTAP10-2P60368 255 aa6.64□□□□□ -1.35
CCDC58-201ENST00000291458 CCL20P78556 96 aa6.64□□□□□ -1.35
CCDC58-201ENST00000291458 Q6ZSN1 163 aa6.64□□□□□ -1.35
CCDC58-201ENST00000291458 C14orf178Q8N769 122 aaPredicted RBP6.64□□□□□ -1.35
CCDC58-201ENST00000291458 SYT8Q8NBV8 401 aa6.64□□□□□ -1.35
CCDC58-201ENST00000291458 DERL1Q9BUN8 251 aa6.64□□□□□ -1.35
CCDC58-201ENST00000291458 Q9HAA7 133 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms