RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 SPRNQ5BIV9 151 aa8.9□□□□□ -0.98
NPC1L1-201ENST00000289547 OVOL2Q9BRP0 275 aa8.9□□□□□ -0.98
NPC1L1-201ENST00000289547 GTSF1Q8WW33 167 aa8.9□□□□□ -0.98
NPC1L1-201ENST00000289547 C1orf159Q96HA4 380 aa8.9□□□□□ -0.98
NPC1L1-201ENST00000289547 TRAV13-1A0A0B4J241 112 aa8.9□□□□□ -0.99
NPC1L1-201ENST00000289547 GHRHP01286 108 aa8.9□□□□□ -0.99
NPC1L1-201ENST00000289547 MRPL23Q16540 153 aaKnown RBP8.9□□□□□ -0.99
NPC1L1-201ENST00000289547 DNAJC30Q96LL9 226 aa8.9□□□□□ -0.99
NPC1L1-201ENST00000289547 NDUFA12Q9UI09 145 aa8.9□□□□□ -0.99
NPC1L1-201ENST00000289547 MALRD1Q5VYJ5 2156 aa8.89□□□□□ -0.99
NPC1L1-201ENST00000289547 TRGV2A0A075B6R0 118 aa8.89□□□□□ -0.99
NPC1L1-201ENST00000289547 IGHG4P01861 327 aa8.89□□□□□ -0.99
NPC1L1-201ENST00000289547 C17orf77Q96MU5 243 aa8.89□□□□□ -0.99
NPC1L1-201ENST00000289547 TP53TG3Q9ULZ0 132 aa8.89□□□□□ -0.99
NPC1L1-201ENST00000289547 SDHAF1A6NFY7 115 aa8.89□□□□□ -0.99
NPC1L1-201ENST00000289547 C11orf71Q6IPW1 123 aa8.89□□□□□ -0.99
NPC1L1-201ENST00000289547 FREM1Q5H8C1 2179 aa8.89□□□□□ -0.99
NPC1L1-201ENST00000289547 DSCAML1Q8TD84 2053 aa8.89□□□□□ -0.99
NPC1L1-201ENST00000289547 FAM236AA0A1B0GUQ0 79 aa8.89□□□□□ -0.99
NPC1L1-201ENST00000289547 FAM236BA0A1B0GV22 79 aa8.89□□□□□ -0.99
NPC1L1-201ENST00000289547 THAP8Q8NA92 274 aa8.89□□□□□ -0.99
NPC1L1-201ENST00000289547 MT-ATP8P03928 68 aa8.88□□□□□ -0.99
NPC1L1-201ENST00000289547 DAZ1Q9NQZ3 744 aaKnown RBP8.88□□□□□ -0.99
NPC1L1-201ENST00000289547 EGR2P11161 476 aaPredicted RBP8.88□□□□□ -0.99
NPC1L1-201ENST00000289547 Q6ZUT4 128 aa8.88□□□□□ -0.99
NPC1L1-201ENST00000289547 TPSG1Q9NRR2 321 aa8.88□□□□□ -0.99
NPC1L1-201ENST00000289547 EML6Q6ZMW3 1958 aa8.88□□□□□ -0.99
NPC1L1-201ENST00000289547 ZFP36P26651 326 aaKnown RBP8.88□□□□□ -0.99
NPC1L1-201ENST00000289547 JPT2Q9H910 190 aa8.88□□□□□ -0.99
NPC1L1-201ENST00000289547 SYNJ2BPP57105 145 aa8.87□□□□□ -0.99
NPC1L1-201ENST00000289547 LMO4P61968 165 aa8.87□□□□□ -0.99
NPC1L1-201ENST00000289547 ZNF493Q6ZR52 646 aa8.87□□□□□ -0.99
NPC1L1-201ENST00000289547 ODF3L1Q8IXM7 274 aa8.87□□□□□ -0.99
NPC1L1-201ENST00000289547 H3BRN7 92 aa8.87□□□□□ -0.99
NPC1L1-201ENST00000289547 J3KT08 172 aa8.87□□□□□ -0.99
NPC1L1-201ENST00000289547 MRAPQ8TCY5 172 aa8.87□□□□□ -0.99
NPC1L1-201ENST00000289547 CLPSL1A2RUU4 121 aa8.87□□□□□ -0.99
NPC1L1-201ENST00000289547 VWC2LB2RUY7 222 aa8.87□□□□□ -0.99
NPC1L1-201ENST00000289547 POU2AF1Q16633 256 aa8.87□□□□□ -0.99
NPC1L1-201ENST00000289547 SPANXCQ9NY87 97 aa8.87□□□□□ -0.99
NPC1L1-201ENST00000289547 PLXNB1O43157 2135 aa8.87□□□□□ -0.99
NPC1L1-201ENST00000289547 PHLDA1Q8WV24 401 aaPredicted RBP8.87□□□□□ -0.99
NPC1L1-201ENST00000289547 INAFM1C9JVW0 142 aa8.86□□□□□ -0.99
NPC1L1-201ENST00000289547 CHCHD5Q9BSY4 110 aa8.86□□□□□ -0.99
NPC1L1-201ENST00000289547 FGF23Q9GZV9 251 aaPredicted RBP8.86□□□□□ -0.99
NPC1L1-201ENST00000289547 MSMPQ1L6U9 139 aa8.86□□□□□ -0.99
NPC1L1-201ENST00000289547 MSRB1Q9NZV6 116 aa8.86□□□□□ -0.99
NPC1L1-201ENST00000289547 LY6G6DO95868 133 aa8.86□□□□□ -0.99
NPC1L1-201ENST00000289547 LINC01620Q4KN68 170 aa8.86□□□□□ -0.99
NPC1L1-201ENST00000289547 SIRPDQ9H106 197 aa8.86□□□□□ -0.99
NPC1L1-201ENST00000289547 A4D1N5 150 aa8.85□□□□□ -0.99
NPC1L1-201ENST00000289547 FOXE3Q13461 319 aa8.85□□□□□ -0.99
NPC1L1-201ENST00000289547 C22orf34Q6ZV56 151 aa8.85□□□□□ -0.99
NPC1L1-201ENST00000289547 TRPT1Q86TN4 253 aaKnown RBP8.85□□□□□ -0.99
NPC1L1-201ENST00000289547 SPANXB1Q9NS25 103 aaPredicted RBP8.85□□□□□ -0.99
NPC1L1-201ENST00000289547 PATE2Q6UY27 113 aa8.85□□□□□ -0.99
NPC1L1-201ENST00000289547 FAM167A-AS1Q96KT0 104 aa8.85□□□□□ -0.99
NPC1L1-201ENST00000289547 OVOL3O00110 214 aa8.85□□□□□ -0.99
NPC1L1-201ENST00000289547 TNFRSF13BO14836 293 aaPredicted RBP8.85□□□□□ -0.99
NPC1L1-201ENST00000289547 ATP6V0E2Q8NHE4 81 aa8.85□□□□□ -0.99
NPC1L1-201ENST00000289547 ANKHD1Q8IWZ3 2542 aaKnown RBP8.85□□□□□ -0.99
NPC1L1-201ENST00000289547 UBL5Q9BZL1 73 aa8.85□□□□□ -0.99
NPC1L1-201ENST00000289547 NCOA6Q14686 2063 aaPredicted RBP8.84□□□□□ -0.99
NPC1L1-201ENST00000289547 G3V318 75 aa8.84□□□□□ -0.99
NPC1L1-201ENST00000289547 MALP21145 153 aa8.84□□□□□ -0.99
NPC1L1-201ENST00000289547 HAMPP81172 84 aa8.84□□□□□ -0.99
NPC1L1-201ENST00000289547 RBM3P98179 157 aaKnown RBP8.84□□□□□ -0.99
NPC1L1-201ENST00000289547 RHPN1-AS1Q9BWJ2 59 aa8.84□□□□□ -0.99
NPC1L1-201ENST00000289547 C9orf66Q5T8R8 295 aa8.83□□□□□ -1
NPC1L1-201ENST00000289547 TINCRA0A1B0GVN0 87 aa8.83□□□□□ -1
NPC1L1-201ENST00000289547 C6orf226Q5I0X4 101 aa8.83□□□□□ -1
NPC1L1-201ENST00000289547 GDF5OSQ5U4N7 250 aa8.83□□□□□ -1
NPC1L1-201ENST00000289547 TRAV12-1A0A0B4J245 112 aa8.83□□□□□ -1
NPC1L1-201ENST00000289547 ACYP1P07311 99 aa8.83□□□□□ -1
NPC1L1-201ENST00000289547 ODF1Q14990 250 aa8.83□□□□□ -1
NPC1L1-201ENST00000289547 TNCP24821 2201 aa8.83□□□□□ -1
NPC1L1-201ENST00000289547 RPL36AP83881 106 aaKnown RBP8.83□□□□□ -1
NPC1L1-201ENST00000289547 ZNF491Q8N8L2 437 aa8.83□□□□□ -1
NPC1L1-201ENST00000289547 RPL36ALQ969Q0 106 aaKnown RBP8.83□□□□□ -1
NPC1L1-201ENST00000289547 DNAJC9-AS1A6NH13 148 aa8.82□□□□□ -1
NPC1L1-201ENST00000289547 KNCNA6PVL3 124 aa8.82□□□□□ -1
NPC1L1-201ENST00000289547 NDUFV3P56181 108 aaKnown RBP8.82□□□□□ -1
NPC1L1-201ENST00000289547 DIAPH2-AS1Q14236 149 aa8.82□□□□□ -1
NPC1L1-201ENST00000289547 RBMY1FQ15415 496 aaKnown RBP8.82□□□□□ -1
NPC1L1-201ENST00000289547 BAALC-AS2P0C853 105 aa8.82□□□□□ -1
NPC1L1-201ENST00000289547 NOTCH2Q04721 2471 aa8.82□□□□□ -1
NPC1L1-201ENST00000289547 IGKV1OR2-108A0A075B7D4 117 aa8.82□□□□□ -1
NPC1L1-201ENST00000289547 CDSNQ15517 529 aa8.82□□□□□ -1
NPC1L1-201ENST00000289547 GP9P14770 177 aa8.82□□□□□ -1
NPC1L1-201ENST00000289547 TRGV4A0A0C4DH28 118 aa8.81□□□□□ -1
NPC1L1-201ENST00000289547 I3L3M4 83 aa8.81□□□□□ -1
NPC1L1-201ENST00000289547 CCL24O00175 119 aa8.81□□□□□ -1
NPC1L1-201ENST00000289547 NDUFA4O00483 81 aa8.81□□□□□ -1
NPC1L1-201ENST00000289547 A0A1B0GX51 115 aa8.81□□□□□ -1
NPC1L1-201ENST00000289547 SPRY2O43597 315 aa8.81□□□□□ -1
NPC1L1-201ENST00000289547 ZNF295-AS1Q8N0V1 137 aa8.81□□□□□ -1
NPC1L1-201ENST00000289547 ZMAT4Q9H898 229 aa8.81□□□□□ -1
NPC1L1-201ENST00000289547 E9PLD3 99 aa8.81□□□□□ -1
NPC1L1-201ENST00000289547 APOC4P55056 127 aa8.81□□□□□ -1
NPC1L1-201ENST00000289547 NPBQ8NG41 125 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms