RNA–Protein interactions for RNA: ENST00000289272.2

PCDHA13-201, Transcript of protocadherin alpha 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHA13, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-201ENST00000289272 WFDC12Q8WWY7 111 aa13.68□□□□□ -0.22
PCDHA13-201ENST00000289272 OVOL3O00110 214 aa13.68□□□□□ -0.22
PCDHA13-201ENST00000289272 PCNX2A6NKB5 2137 aa13.68□□□□□ -0.22
PCDHA13-201ENST00000289272 WI2-2373I1.2A0A1W2PRP0 233 aa13.67□□□□□ -0.22
PCDHA13-201ENST00000289272 IGLV2-8P01709 118 aa13.67□□□□□ -0.22
PCDHA13-201ENST00000289272 MUSTN1Q8IVN3 82 aa13.67□□□□□ -0.22
PCDHA13-201ENST00000289272 EP400Q96L91 3159 aa13.67□□□□□ -0.22
PCDHA13-201ENST00000289272 NDUFV3P56181 108 aaKnown RBP13.67□□□□□ -0.22
PCDHA13-201ENST00000289272 RUSC1-AS1Q66K80 236 aa13.67□□□□□ -0.22
PCDHA13-201ENST00000289272 NPBQ8NG41 125 aa13.67□□□□□ -0.22
PCDHA13-201ENST00000289272 SPRY4Q9C004 299 aa13.67□□□□□ -0.22
PCDHA13-201ENST00000289272 CACNA1BQ00975 2339 aa13.66□□□□□ -0.22
PCDHA13-201ENST00000289272 WT1P19544 449 aaPredicted RBP13.66□□□□□ -0.22
PCDHA13-201ENST00000289272 C3orf56Q8N813 242 aa13.66□□□□□ -0.22
PCDHA13-201ENST00000289272 TMEM131Q92545 1883 aa13.66□□□□□ -0.22
PCDHA13-201ENST00000289272 ELANEP08246 267 aa13.66□□□□□ -0.22
PCDHA13-201ENST00000289272 ZFP2Q6ZN57 461 aa13.66□□□□□ -0.22
PCDHA13-201ENST00000289272 SPATA25Q9BR10 227 aa13.66□□□□□ -0.22
PCDHA13-201ENST00000289272 DOPEY2Q9Y3R5 2298 aa13.65□□□□□ -0.22
PCDHA13-201ENST00000289272 NDUFA11Q86Y39 141 aa13.65□□□□□ -0.22
PCDHA13-201ENST00000289272 IGHV7-4-1A0A0J9YVY3 117 aa13.65□□□□□ -0.22
PCDHA13-201ENST00000289272 KNCNA6PVL3 124 aa13.65□□□□□ -0.22
PCDHA13-201ENST00000289272 CRLF1O75462 422 aa13.65□□□□□ -0.22
PCDHA13-201ENST00000289272 UBE2DNLQ8IWF7 75 aa13.65□□□□□ -0.22
PCDHA13-201ENST00000289272 RNF152Q8N8N0 203 aa13.65□□□□□ -0.22
PCDHA13-201ENST00000289272 BAALCQ8WXS3 180 aa13.65□□□□□ -0.22
PCDHA13-201ENST00000289272 C17orf77Q96MU5 243 aa13.65□□□□□ -0.22
PCDHA13-201ENST00000289272 SPTAN1Q13813 2472 aaKnown RBP13.65□□□□□ -0.22
PCDHA13-201ENST00000289272 RBM3P98179 157 aaKnown RBP13.65□□□□□ -0.22
PCDHA13-201ENST00000289272 DKK4Q9UBT3 224 aa13.65□□□□□ -0.22
PCDHA13-201ENST00000289272 SLC25A29Q8N8R3 303 aa13.64□□□□□ -0.23
PCDHA13-201ENST00000289272 TP53TG3Q9ULZ0 132 aa13.64□□□□□ -0.23
PCDHA13-201ENST00000289272 CRYGCP07315 174 aa13.64□□□□□ -0.23
PCDHA13-201ENST00000289272 HAMPP81172 84 aa13.64□□□□□ -0.23
PCDHA13-201ENST00000289272 SPRNQ5BIV9 151 aa13.64□□□□□ -0.23
PCDHA13-201ENST00000289272 NCOA6Q14686 2063 aaPredicted RBP13.64□□□□□ -0.23
PCDHA13-201ENST00000289272 UQCRQO14949 82 aa13.64□□□□□ -0.23
PCDHA13-201ENST00000289272 RNF183Q96D59 192 aa13.63□□□□□ -0.23
PCDHA13-201ENST00000289272 CTSZQ9UBR2 303 aa13.63□□□□□ -0.23
PCDHA13-201ENST00000289272 JMJD7-PLA2G4BH0Y9G9 81 aa13.63□□□□□ -0.23
PCDHA13-201ENST00000289272 C9orf47Q6ZRZ4 202 aa13.63□□□□□ -0.23
PCDHA13-201ENST00000289272 A0A1B0GX51 115 aa13.63□□□□□ -0.23
PCDHA13-201ENST00000289272 hADV29S1A0JD25 119 aa13.63□□□□□ -0.23
PCDHA13-201ENST00000289272 IGKV1-17P01599 117 aa13.63□□□□□ -0.23
PCDHA13-201ENST00000289272 MALRD1Q5VYJ5 2156 aa13.62□□□□□ -0.23
PCDHA13-201ENST00000289272 C5orf47Q569G3 176 aa13.62□□□□□ -0.23
PCDHA13-201ENST00000289272 ASPHD1Q5U4P2 390 aa13.62□□□□□ -0.23
PCDHA13-201ENST00000289272 K7EIM0 57 aa13.62□□□□□ -0.23
PCDHA13-201ENST00000289272 MLST8Q9BVC4 326 aa13.62□□□□□ -0.23
PCDHA13-201ENST00000289272 ZNF295-AS1Q8N0V1 137 aa13.62□□□□□ -0.23
PCDHA13-201ENST00000289272 CITED2Q99967 270 aaPredicted RBP13.61□□□□□ -0.23
PCDHA13-201ENST00000289272 ABCA4P78363 2273 aa13.61□□□□□ -0.23
PCDHA13-201ENST00000289272 IGLV11-55A0A075B6I3 123 aa13.61□□□□□ -0.23
PCDHA13-201ENST00000289272 F6UB75 175 aa13.61□□□□□ -0.23
PCDHA13-201ENST00000289272 ZNF503Q96F45 646 aa13.61□□□□□ -0.23
PCDHA13-201ENST00000289272 G3V318 75 aa13.6□□□□□ -0.23
PCDHA13-201ENST00000289272 FRMD6-AS1P0C7T7 363 aa13.6□□□□□ -0.23
PCDHA13-201ENST00000289272 ABCA1O95477 2261 aa13.6□□□□□ -0.23
PCDHA13-201ENST00000289272 DEFB131AP59861 70 aa13.6□□□□□ -0.23
PCDHA13-201ENST00000289272 A0A1W2PNU3 283 aaPredicted RBP13.6□□□□□ -0.23
PCDHA13-201ENST00000289272 GATA1P15976 413 aaPredicted RBP13.6□□□□□ -0.23
PCDHA13-201ENST00000289272 IMUPQ9GZP8 106 aa13.6□□□□□ -0.23
PCDHA13-201ENST00000289272 SPINK13Q1W4C9 94 aa13.59□□□□□ -0.23
PCDHA13-201ENST00000289272 SUMO4Q6EEV6 95 aa13.59□□□□□ -0.23
PCDHA13-201ENST00000289272 Q9H8V8 135 aa13.59□□□□□ -0.23
PCDHA13-201ENST00000289272 RPL35AP18077 110 aaKnown RBP13.59□□□□□ -0.23
PCDHA13-201ENST00000289272 FOXE3Q13461 319 aa13.59□□□□□ -0.23
PCDHA13-201ENST00000289272 IGKV1OR2-108A0A075B7D4 117 aa13.59□□□□□ -0.23
PCDHA13-201ENST00000289272 U3KQK5 164 aa13.59□□□□□ -0.23
PCDHA13-201ENST00000289272 LGALS9O00182 355 aa13.59□□□□□ -0.23
PCDHA13-201ENST00000289272 DEFB104AQ8WTQ1 72 aa13.59□□□□□ -0.23
PCDHA13-201ENST00000289272 P0DMU3 169 aa13.58□□□□□ -0.24
PCDHA13-201ENST00000289272 FAM231AP0DMU4 169 aa13.58□□□□□ -0.24
PCDHA13-201ENST00000289272 FAM231CP0DMU5 169 aa13.58□□□□□ -0.24
PCDHA13-201ENST00000289272 DAZAP2Q15038 168 aaPredicted RBP13.58□□□□□ -0.24
PCDHA13-201ENST00000289272 MUC22E2RYF6 1773 aaPredicted RBP13.58□□□□□ -0.24
PCDHA13-201ENST00000289272 CRIP3Q6Q6R5 217 aa13.58□□□□□ -0.24
PCDHA13-201ENST00000289272 MRAPQ8TCY5 172 aa13.58□□□□□ -0.24
PCDHA13-201ENST00000289272 FREM1Q5H8C1 2179 aa13.57□□□□□ -0.24
PCDHA13-201ENST00000289272 PCDH15Q96QU1 1955 aa13.57□□□□□ -0.24
PCDHA13-201ENST00000289272 TCL1BO95988 128 aa13.57□□□□□ -0.24
PCDHA13-201ENST00000289272 ZNRF2Q8NHG8 242 aa13.57□□□□□ -0.24
PCDHA13-201ENST00000289272 IGLV2-23P01705 113 aa13.56□□□□□ -0.24
PCDHA13-201ENST00000289272 GDF5OSQ5U4N7 250 aa13.56□□□□□ -0.24
PCDHA13-201ENST00000289272 KLK9Q9UKQ9 250 aa13.56□□□□□ -0.24
PCDHA13-201ENST00000289272 ZGRF1Q86YA3 2104 aa13.56□□□□□ -0.24
PCDHA13-201ENST00000289272 PSMB8P28062 276 aa13.56□□□□□ -0.24
PCDHA13-201ENST00000289272 MT-ATP8P03928 68 aa13.55□□□□□ -0.24
PCDHA13-201ENST00000289272 PDE6GP18545 87 aa13.55□□□□□ -0.24
PCDHA13-201ENST00000289272 EIF4EBP1Q13541 118 aaPredicted RBP13.55□□□□□ -0.24
PCDHA13-201ENST00000289272 DEFB121Q5J5C9 76 aa13.55□□□□□ -0.24
PCDHA13-201ENST00000289272 C1orf43Q9BWL3 253 aa13.55□□□□□ -0.24
PCDHA13-201ENST00000289272 LINC00574Q9H8X3 128 aa13.55□□□□□ -0.24
PCDHA13-201ENST00000289272 VPREB3Q9UKI3 123 aa13.55□□□□□ -0.24
PCDHA13-201ENST00000289272 MED13Q9UHV7 2174 aa13.55□□□□□ -0.24
PCDHA13-201ENST00000289272 PFN2P35080 140 aa13.55□□□□□ -0.24
PCDHA13-201ENST00000289272 ATP5EP2Q5VTU8 51 aa13.55□□□□□ -0.24
PCDHA13-201ENST00000289272 IGHG2P01859 326 aa13.55□□□□□ -0.24
PCDHA13-201ENST00000289272 HOXB4P17483 251 aaPredicted RBP13.55□□□□□ -0.24
PCDHA13-201ENST00000289272 APOC4P55056 127 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms