RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 MUC21A0A140T8X8 626 aa12.27□□□□□ -0.44
ATG3-201ENST00000283290 LCE6AA0A183 80 aa12.27□□□□□ -0.44
ATG3-201ENST00000283290 GZMBP10144 247 aa12.27□□□□□ -0.44
ATG3-201ENST00000283290 HOXA5P20719 270 aa12.27□□□□□ -0.44
ATG3-201ENST00000283290 S100A4P26447 101 aaKnown RBP12.27□□□□□ -0.44
ATG3-201ENST00000283290 LINC01559Q495D7 138 aa12.27□□□□□ -0.44
ATG3-201ENST00000283290 SMIM7Q9BQ49 75 aa12.27□□□□□ -0.44
ATG3-201ENST00000283290 DNAH1Q9P2D7 4330 aa12.27□□□□□ -0.45
ATG3-201ENST00000283290 ASIPP42127 132 aa12.26□□□□□ -0.45
ATG3-201ENST00000283290 SSTP61278 116 aa12.26□□□□□ -0.45
ATG3-201ENST00000283290 C9orf85Q96MD7 179 aa12.26□□□□□ -0.45
ATG3-201ENST00000283290 RNASE7Q9H1E1 156 aaKnown RBP12.26□□□□□ -0.45
ATG3-201ENST00000283290 ZNF727A8MUV8 499 aa12.26□□□□□ -0.45
ATG3-201ENST00000283290 ATP5G1P05496 136 aa12.26□□□□□ -0.45
ATG3-201ENST00000283290 ARMS2P0C7Q2 107 aa12.26□□□□□ -0.45
ATG3-201ENST00000283290 SVBPQ8N300 66 aa12.26□□□□□ -0.45
ATG3-201ENST00000283290 IGHV4-4A0A075B6R2 117 aa12.25□□□□□ -0.45
ATG3-201ENST00000283290 C19orf71A6NCJ1 209 aa12.25□□□□□ -0.45
ATG3-201ENST00000283290 M0R2P5 195 aa12.25□□□□□ -0.45
ATG3-201ENST00000283290 TMEM88Q6PEY1 159 aa12.25□□□□□ -0.45
ATG3-201ENST00000283290 POM121L12Q8N7R1 296 aa12.25□□□□□ -0.45
ATG3-201ENST00000283290 SPXQ9BT56 116 aa12.25□□□□□ -0.45
ATG3-201ENST00000283290 A0A0J9YY99 117 aa12.24□□□□□ -0.45
ATG3-201ENST00000283290 ZNF876PQ49A33 203 aa12.24□□□□□ -0.45
ATG3-201ENST00000283290 ZNF479Q96JC4 524 aa12.24□□□□□ -0.45
ATG3-201ENST00000283290 JPT2Q9H910 190 aa12.24□□□□□ -0.45
ATG3-201ENST00000283290 IGHV3-73A0A0B4J1V6 119 aa12.23□□□□□ -0.45
ATG3-201ENST00000283290 NUDT10Q8NFP7 164 aa12.23□□□□□ -0.45
ATG3-201ENST00000283290 OR2D3Q8NGH3 330 aa12.23□□□□□ -0.45
ATG3-201ENST00000283290 DAZAP1Q96EP5 407 aaKnown RBP12.23□□□□□ -0.45
ATG3-201ENST00000283290 NUDT11Q96G61 164 aa12.23□□□□□ -0.45
ATG3-201ENST00000283290 SNAPINO95295 136 aa12.22□□□□□ -0.45
ATG3-201ENST00000283290 LGALS9BQ3B8N2 356 aa12.22□□□□□ -0.45
ATG3-201ENST00000283290 FAM74A3Q4VXF1 159 aa12.22□□□□□ -0.45
ATG3-201ENST00000283290 DMRTA1Q5VZB9 504 aa12.22□□□□□ -0.45
ATG3-201ENST00000283290 RASL10AQ92737 203 aa12.22□□□□□ -0.45
ATG3-201ENST00000283290 P01737 135 aa12.22□□□□□ -0.45
ATG3-201ENST00000283290 LINC00476Q8WZB0 136 aa12.22□□□□□ -0.45
ATG3-201ENST00000283290 TPPP3Q9BW30 176 aa12.22□□□□□ -0.45
ATG3-201ENST00000283290 IL36BQ9NZH7 164 aa12.22□□□□□ -0.45
ATG3-201ENST00000283290 APLNQ9ULZ1 77 aa12.22□□□□□ -0.45
ATG3-201ENST00000283290 TRAV26-1A0A087WT03 109 aa12.21□□□□□ -0.46
ATG3-201ENST00000283290 M0R381 172 aa12.21□□□□□ -0.46
ATG3-201ENST00000283290 ATRAIDQ6UW56 229 aa12.21□□□□□ -0.46
ATG3-201ENST00000283290 LINC01551Q86U37 167 aa12.21□□□□□ -0.46
ATG3-201ENST00000283290 SMIM12Q96EX1 92 aa12.21□□□□□ -0.46
ATG3-201ENST00000283290 CLRN3Q8NCR9 226 aa12.2□□□□□ -0.46
ATG3-201ENST00000283290 OR10AG1Q8NH19 301 aa12.2□□□□□ -0.46
ATG3-201ENST00000283290 OR4C5Q8NGB2 326 aa12.19□□□□□ -0.46
ATG3-201ENST00000283290 SAMD10Q9BYL1 202 aa12.19□□□□□ -0.46
ATG3-201ENST00000283290 PHLDA3Q9Y5J5 127 aa12.19□□□□□ -0.46
ATG3-201ENST00000283290 SCO1O75880 301 aa12.18□□□□□ -0.46
ATG3-201ENST00000283290 LY6G6CO95867 125 aa12.18□□□□□ -0.46
ATG3-201ENST00000283290 FHL2Q14192 279 aa12.18□□□□□ -0.46
ATG3-201ENST00000283290 DNLZQ5SXM8 178 aa12.18□□□□□ -0.46
ATG3-201ENST00000283290 SCRT2Q9NQ03 307 aa12.18□□□□□ -0.46
ATG3-201ENST00000283290 NAT8Q9UHE5 227 aa12.18□□□□□ -0.46
ATG3-201ENST00000283290 TRGV4A0A0C4DH28 118 aa12.18□□□□□ -0.46
ATG3-201ENST00000283290 NUDT3O95989 172 aa12.18□□□□□ -0.46
ATG3-201ENST00000283290 TCTAP57738 103 aa12.18□□□□□ -0.46
ATG3-201ENST00000283290 ERVFC1-1P60608 527 aa12.18□□□□□ -0.46
ATG3-201ENST00000283290 RPL23P62829 140 aaKnown RBP12.18□□□□□ -0.46
ATG3-201ENST00000283290 ADIRFQ15847 76 aa12.18□□□□□ -0.46
ATG3-201ENST00000283290 TMEM241Q24JQ0 296 aa12.18□□□□□ -0.46
ATG3-201ENST00000283290 CFAP126Q5VTH2 177 aa12.18□□□□□ -0.46
ATG3-201ENST00000283290 VSIG2Q96IQ7 327 aa12.18□□□□□ -0.46
ATG3-201ENST00000283290 NDUFAF3Q9BU61 184 aa12.18□□□□□ -0.46
ATG3-201ENST00000283290 RPP21Q9H633 154 aaKnown RBP12.18□□□□□ -0.46
ATG3-201ENST00000283290 TRAV4A0A0B4J268 109 aa12.17□□□□□ -0.46
ATG3-201ENST00000283290 PNRC1Q12796 327 aaPredicted RBP12.17□□□□□ -0.46
ATG3-201ENST00000283290 C18orf15Q96N68 181 aa12.17□□□□□ -0.46
ATG3-201ENST00000283290 BIN3Q9NQY0 253 aa12.17□□□□□ -0.46
ATG3-201ENST00000283290 A0A087WWL8 130 aa12.16□□□□□ -0.46
ATG3-201ENST00000283290 RS1O15537 224 aa12.16□□□□□ -0.46
ATG3-201ENST00000283290 GATCO43716 136 aaKnown RBP12.16□□□□□ -0.46
ATG3-201ENST00000283290 VPS13DQ5THJ4 4388 aa12.15□□□□□ -0.46
ATG3-201ENST00000283290 LOC100131303A0A0U1RQF7 123 aa12.15□□□□□ -0.46
ATG3-201ENST00000283290 RHEBQ15382 184 aa12.15□□□□□ -0.46
ATG3-201ENST00000283290 FAM74A4Q5TZK3 123 aa12.15□□□□□ -0.46
ATG3-201ENST00000283290 Q6ZSN1 163 aa12.15□□□□□ -0.46
ATG3-201ENST00000283290 FER1L6-AS1Q8NA97 138 aa12.15□□□□□ -0.46
ATG3-201ENST00000283290 ISOC2Q96AB3 205 aa12.15□□□□□ -0.46
ATG3-201ENST00000283290 MSRB1Q9NZV6 116 aa12.15□□□□□ -0.46
ATG3-201ENST00000283290 LY96Q9Y6Y9 160 aa12.15□□□□□ -0.46
ATG3-201ENST00000283290 A0A096LPF7 62 aa12.14□□□□□ -0.47
ATG3-201ENST00000283290 C7orf77A4D0Y5 90 aa12.14□□□□□ -0.47
ATG3-201ENST00000283290 IGLC6P0CF74 106 aa12.14□□□□□ -0.47
ATG3-201ENST00000283290 LYZL1Q6UWQ5 148 aa12.14□□□□□ -0.47
ATG3-201ENST00000283290 KMT2AQ03164 3969 aa12.14□□□□□ -0.47
ATG3-201ENST00000283290 SNAI2O43623 268 aa12.13□□□□□ -0.47
ATG3-201ENST00000283290 SPANXN1Q5VSR9 72 aa12.13□□□□□ -0.47
ATG3-201ENST00000283290 LGALS9CQ6DKI2 356 aa12.13□□□□□ -0.47
ATG3-201ENST00000283290 GTSF1Q8WW33 167 aa12.13□□□□□ -0.47
ATG3-201ENST00000283290 FAM210BQ96KR6 192 aa12.13□□□□□ -0.47
ATG3-201ENST00000283290 SSBP4Q9BWG4 385 aaPredicted RBP12.13□□□□□ -0.47
ATG3-201ENST00000283290 HHLA3Q9XRX5 114 aa12.13□□□□□ -0.47
ATG3-201ENST00000283290 PAX4O43316 350 aa12.13□□□□□ -0.47
ATG3-201ENST00000283290 CXCL1P09341 107 aa12.13□□□□□ -0.47
ATG3-201ENST00000283290 CRYBA4P53673 196 aa12.13□□□□□ -0.47
ATG3-201ENST00000283290 RPS20P60866 119 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms