RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 TSPOP30536 169 aa4.55□□□□□ -1.68
TNFSF4-201ENST00000281834 CRIP2P52943 208 aaPredicted RBP4.55□□□□□ -1.68
TNFSF4-201ENST00000281834 COTL1Q14019 142 aa4.55□□□□□ -1.68
TNFSF4-201ENST00000281834 Q6YL49 198 aa4.55□□□□□ -1.68
TNFSF4-201ENST00000281834 ZNF493Q6ZR52 646 aa4.55□□□□□ -1.68
TNFSF4-201ENST00000281834 LURAP1LQ8IV03 231 aa4.55□□□□□ -1.68
TNFSF4-201ENST00000281834 DKK2Q9UBU2 259 aa4.55□□□□□ -1.68
TNFSF4-201ENST00000281834 LAMTOR2Q9Y2Q5 125 aa4.55□□□□□ -1.68
TNFSF4-201ENST00000281834 GOLT1BQ9Y3E0 138 aa4.55□□□□□ -1.68
TNFSF4-201ENST00000281834 CR1P17927 2039 aa4.55□□□□□ -1.68
TNFSF4-201ENST00000281834 NBEAL2Q6ZNJ1 2754 aa4.55□□□□□ -1.68
TNFSF4-201ENST00000281834 ATRQ13535 2644 aa4.55□□□□□ -1.68
TNFSF4-201ENST00000281834 A0A096LNJ9 63 aa4.55□□□□□ -1.68
TNFSF4-201ENST00000281834 IGHV3-73A0A0B4J1V6 119 aa4.55□□□□□ -1.68
TNFSF4-201ENST00000281834 C7orf71A4D174 169 aa4.55□□□□□ -1.68
TNFSF4-201ENST00000281834 H3BUA1 57 aa4.55□□□□□ -1.68
TNFSF4-201ENST00000281834 CFHR3Q02985 330 aa4.55□□□□□ -1.68
TNFSF4-201ENST00000281834 OR2K2Q8NGT1 345 aa4.55□□□□□ -1.68
TNFSF4-201ENST00000281834 IFI27L1Q96BM0 104 aa4.55□□□□□ -1.68
TNFSF4-201ENST00000281834 TTTY13Q9BZ97 58 aa4.55□□□□□ -1.68
TNFSF4-201ENST00000281834 SOCS3O14543 225 aa4.54□□□□□ -1.68
TNFSF4-201ENST00000281834 SMIM17P0DL12 118 aa4.54□□□□□ -1.68
TNFSF4-201ENST00000281834 DEFB131AP59861 70 aa4.54□□□□□ -1.68
TNFSF4-201ENST00000281834 SMR3AQ99954 134 aa4.54□□□□□ -1.68
TNFSF4-201ENST00000281834 NUDT3O95989 172 aa4.54□□□□□ -1.68
TNFSF4-201ENST00000281834 LGALS1P09382 135 aaKnown RBP4.54□□□□□ -1.68
TNFSF4-201ENST00000281834 MPV17L2Q567V2 206 aa4.54□□□□□ -1.68
TNFSF4-201ENST00000281834 APRG1Q8IVJ8 170 aa4.54□□□□□ -1.68
TNFSF4-201ENST00000281834 DYNLRB2Q8TF09 96 aa4.54□□□□□ -1.68
TNFSF4-201ENST00000281834 DCANP1Q8TF63 244 aa4.54□□□□□ -1.68
TNFSF4-201ENST00000281834 FOXC2Q99958 501 aa4.54□□□□□ -1.68
TNFSF4-201ENST00000281834 C2orf88Q9BSF0 95 aa4.54□□□□□ -1.68
TNFSF4-201ENST00000281834 NUTF2P61970 127 aaKnown RBP4.53□□□□□ -1.68
TNFSF4-201ENST00000281834 SLC25A34Q6PIV7 304 aa4.53□□□□□ -1.68
TNFSF4-201ENST00000281834 PET117Q6UWS5 81 aa4.53□□□□□ -1.68
TNFSF4-201ENST00000281834 MDFICQ9P1T7 246 aa4.53□□□□□ -1.68
TNFSF4-201ENST00000281834 MRPL53Q96EL3 112 aaKnown RBP4.53□□□□□ -1.68
TNFSF4-201ENST00000281834 TMEM160Q9NX00 188 aa4.53□□□□□ -1.68
TNFSF4-201ENST00000281834 EMP1P54849 157 aa4.53□□□□□ -1.68
TNFSF4-201ENST00000281834 ANKRD39Q53RE8 183 aa4.53□□□□□ -1.68
TNFSF4-201ENST00000281834 TMEM61Q8N0U2 210 aa4.53□□□□□ -1.68
TNFSF4-201ENST00000281834 ZNF256Q9Y2P7 627 aaPredicted RBP4.53□□□□□ -1.68
TNFSF4-201ENST00000281834 MUC4Q99102 2169 aa4.53□□□□□ -1.68
TNFSF4-201ENST00000281834 ZNF56Q15929 161 aa4.52□□□□□ -1.69
TNFSF4-201ENST00000281834 COX8CQ7Z4L0 72 aa4.52□□□□□ -1.69
TNFSF4-201ENST00000281834 ARL6IP6Q8N6S5 226 aa4.52□□□□□ -1.69
TNFSF4-201ENST00000281834 DLX4Q92988 240 aaPredicted RBP4.52□□□□□ -1.69
TNFSF4-201ENST00000281834 OTOGQ6ZRI0 2925 aa4.52□□□□□ -1.69
TNFSF4-201ENST00000281834 J3QKU1 62 aa4.52□□□□□ -1.69
TNFSF4-201ENST00000281834 PPBPP02775 128 aa4.52□□□□□ -1.69
TNFSF4-201ENST00000281834 ELANEP08246 267 aa4.52□□□□□ -1.69
TNFSF4-201ENST00000281834 PTTG1IPP53801 180 aa4.52□□□□□ -1.69
TNFSF4-201ENST00000281834 KLK9Q2XQG4 91 aa4.52□□□□□ -1.69
TNFSF4-201ENST00000281834 DNAJC9-AS1A6NH13 148 aa4.52□□□□□ -1.69
TNFSF4-201ENST00000281834 RNASE3P12724 160 aaKnown RBP4.52□□□□□ -1.69
TNFSF4-201ENST00000281834 COL5A1-AS1Q5SY13 56 aa4.52□□□□□ -1.69
TNFSF4-201ENST00000281834 GTSCR1Q86UQ5 136 aa4.52□□□□□ -1.69
TNFSF4-201ENST00000281834 PCP2Q8IVA1 136 aa4.52□□□□□ -1.69
TNFSF4-201ENST00000281834 Q8N1Y9 231 aa4.52□□□□□ -1.69
TNFSF4-201ENST00000281834 OR1N2Q8NGR9 330 aa4.52□□□□□ -1.69
TNFSF4-201ENST00000281834 UBE2E2Q96LR5 201 aa4.52□□□□□ -1.69
TNFSF4-201ENST00000281834 AP1S3Q96PC3 154 aa4.52□□□□□ -1.69
TNFSF4-201ENST00000281834 NAA38Q9BRA0 125 aaKnown RBP4.52□□□□□ -1.69
TNFSF4-201ENST00000281834 NXT2Q9NPJ8 142 aaKnown RBP4.52□□□□□ -1.69
TNFSF4-201ENST00000281834 U3KQK5 164 aa4.52□□□□□ -1.69
TNFSF4-201ENST00000281834 NPSP0C0P6 89 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 VAMP3Q15836 100 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 LINC01545Q5VT33 79 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 Q6ZSV7 163 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 KRTAP1-3Q8IUG1 177 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 MYOZ3Q8TDC0 251 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 ATP6V0BQ99437 205 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 TMEM208Q9BTX3 173 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 TRAV8-6A0A0B4J262 113 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 LINC01619G3V211 115 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 K7EMI3 77 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 CD5LO43866 347 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 ZC2HC1BQ5TFG8 222 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 GATD1Q8NB37 220 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 CNFNQ9BYD5 112 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 CSTL1Q9H114 145 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 DPH3P1Q9H4G8 78 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 ESM1Q9NQ30 184 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 A0A0J9YX75 114 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 K7EMT4 169 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 K7EQG2 157 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 CDKN1BP46527 198 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 SUMO2P61956 95 aaKnown RBP4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 LAGE3Q14657 143 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 NSUN5P1Q3KNT7 163 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 ZNF876PQ49A33 203 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 LBHQ53QV2 105 aaPredicted RBP4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 ADAMTSL5Q6ZMM2 481 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 NRACQ8N912 160 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 ST20Q9HBF5 79 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 XCL2Q9UBD3 114 aa4.51□□□□□ -1.69
TNFSF4-201ENST00000281834 F8P00451 2351 aa4.5□□□□□ -1.69
TNFSF4-201ENST00000281834 CRXO43186 299 aaPredicted RBP4.5□□□□□ -1.69
TNFSF4-201ENST00000281834 CD28P10747 220 aa4.5□□□□□ -1.69
TNFSF4-201ENST00000281834 FCER1GP30273 86 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms