RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 SRSF8Q9BRL6 282 aaKnown RBP8.68□□□□□ -1.02
SCLT1-201ENST00000281142 IGHV7-4-1A0A0J9YVY3 117 aa8.68□□□□□ -1.02
SCLT1-201ENST00000281142 J3KRW8 73 aa8.68□□□□□ -1.02
SCLT1-201ENST00000281142 CCL19Q99731 98 aa8.68□□□□□ -1.02
SCLT1-201ENST00000281142 AGPAT4-IT1Q9H0P7 198 aa8.68□□□□□ -1.02
SCLT1-201ENST00000281142 POLQO75417 2590 aa8.68□□□□□ -1.02
SCLT1-201ENST00000281142 UNC79Q9P2D8 2635 aa8.67□□□□□ -1.02
SCLT1-201ENST00000281142 PSMG4Q5JS54 123 aa8.67□□□□□ -1.02
SCLT1-201ENST00000281142 CARD19Q96LW7 228 aa8.67□□□□□ -1.02
SCLT1-201ENST00000281142 RNF5Q99942 180 aa8.67□□□□□ -1.02
SCLT1-201ENST00000281142 MAP1AP78559 2803 aaPredicted RBP8.67□□□□□ -1.02
SCLT1-201ENST00000281142 ITPR2Q14571 2701 aa8.67□□□□□ -1.02
SCLT1-201ENST00000281142 TAL2Q16559 108 aa8.67□□□□□ -1.02
SCLT1-201ENST00000281142 DPM3Q9P2X0 92 aa8.67□□□□□ -1.02
SCLT1-201ENST00000281142 SPG11Q96JI7 2443 aa8.67□□□□□ -1.02
SCLT1-201ENST00000281142 PDZD2O15018 2839 aa8.66□□□□□ -1.02
SCLT1-201ENST00000281142 H3BVH4 76 aa8.66□□□□□ -1.02
SCLT1-201ENST00000281142 IGF1P05019 195 aa8.66□□□□□ -1.02
SCLT1-201ENST00000281142 LGALS1P09382 135 aaKnown RBP8.66□□□□□ -1.02
SCLT1-201ENST00000281142 HLA-DRB4P13762 266 aa8.66□□□□□ -1.02
SCLT1-201ENST00000281142 HERV-K104P63124 156 aa8.66□□□□□ -1.02
SCLT1-201ENST00000281142 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.66□□□□□ -1.02
SCLT1-201ENST00000281142 TMEM190Q8WZ59 177 aa8.66□□□□□ -1.02
SCLT1-201ENST00000281142 PLEKHB2Q96CS7 222 aa8.66□□□□□ -1.02
SCLT1-201ENST00000281142 HLA-DRB4X5D2U9 266 aa8.66□□□□□ -1.02
SCLT1-201ENST00000281142 TRBV7-9A0A0J9YWB2 115 aa8.66□□□□□ -1.02
SCLT1-201ENST00000281142 MYMXA0A1B0GTQ4 84 aa8.66□□□□□ -1.02
SCLT1-201ENST00000281142 NHLRC4P0CG21 123 aaPredicted RBP8.66□□□□□ -1.02
SCLT1-201ENST00000281142 ZFP2Q6ZN57 461 aa8.66□□□□□ -1.02
SCLT1-201ENST00000281142 NPBQ8NG41 125 aa8.66□□□□□ -1.02
SCLT1-201ENST00000281142 ANKRD17O75179 2603 aaKnown RBP8.66□□□□□ -1.02
SCLT1-201ENST00000281142 SRSF2Q01130 221 aaKnown RBP8.65□□□□□ -1.02
SCLT1-201ENST00000281142 PRR9Q5T870 116 aa8.65□□□□□ -1.02
SCLT1-201ENST00000281142 LINC01549A6NIU2 74 aa8.65□□□□□ -1.02
SCLT1-201ENST00000281142 F8VRH5 84 aa8.65□□□□□ -1.02
SCLT1-201ENST00000281142 SPANXN1Q5VSR9 72 aa8.65□□□□□ -1.02
SCLT1-201ENST00000281142 RPL39LQ96EH5 51 aaKnown RBP8.65□□□□□ -1.02
SCLT1-201ENST00000281142 TGFAP01135 160 aa8.65□□□□□ -1.03
SCLT1-201ENST00000281142 DLX4Q92988 240 aaPredicted RBP8.65□□□□□ -1.03
SCLT1-201ENST00000281142 AKAP9Q99996 3911 aa8.64□□□□□ -1.03
SCLT1-201ENST00000281142 HOXA3O43365 443 aaPredicted RBP8.64□□□□□ -1.03
SCLT1-201ENST00000281142 IGHV4-39P01824 125 aa8.64□□□□□ -1.03
SCLT1-201ENST00000281142 PLNP26678 52 aa8.64□□□□□ -1.03
SCLT1-201ENST00000281142 DEFB1P60022 68 aa8.64□□□□□ -1.03
SCLT1-201ENST00000281142 KLHL30-AS1Q8NEE0 82 aa8.64□□□□□ -1.03
SCLT1-201ENST00000281142 TRAV8-2A0A0B4J237 113 aa8.64□□□□□ -1.03
SCLT1-201ENST00000281142 LOC107984156A0A0G2JMH3 177 aa8.64□□□□□ -1.03
SCLT1-201ENST00000281142 H7C1H1 209 aa8.64□□□□□ -1.03
SCLT1-201ENST00000281142 BUB3O43684 328 aa8.64□□□□□ -1.03
SCLT1-201ENST00000281142 EMP1P54849 157 aa8.64□□□□□ -1.03
SCLT1-201ENST00000281142 ARL17AQ8IVW1 177 aa8.64□□□□□ -1.03
SCLT1-201ENST00000281142 SCGB3A1Q96QR1 104 aa8.64□□□□□ -1.03
SCLT1-201ENST00000281142 PRADC1Q9BSG0 188 aa8.64□□□□□ -1.03
SCLT1-201ENST00000281142 CELSR1Q9NYQ6 3014 aa8.64□□□□□ -1.03
SCLT1-201ENST00000281142 CLEC3BP05452 202 aa8.63□□□□□ -1.03
SCLT1-201ENST00000281142 PSMB2P49721 201 aa8.63□□□□□ -1.03
SCLT1-201ENST00000281142 ANXA2RQ3ZCQ2 193 aa8.63□□□□□ -1.03
SCLT1-201ENST00000281142 TMEM78Q5T7P6 136 aa8.63□□□□□ -1.03
SCLT1-201ENST00000281142 ZFAND6Q6FIF0 208 aa8.63□□□□□ -1.03
SCLT1-201ENST00000281142 KIR2DL4Q99706 377 aa8.63□□□□□ -1.03
SCLT1-201ENST00000281142 FAM110AQ9BQ89 295 aa8.63□□□□□ -1.03
SCLT1-201ENST00000281142 SMIM2Q9BVW6 85 aa8.63□□□□□ -1.03
SCLT1-201ENST00000281142 ZFAND3Q9H8U3 227 aa8.63□□□□□ -1.03
SCLT1-201ENST00000281142 ECSCRQ19T08 205 aa8.63□□□□□ -1.03
SCLT1-201ENST00000281142 C15orf32Q32M92 178 aa8.63□□□□□ -1.03
SCLT1-201ENST00000281142 PPDPFLQ8WWR9 84 aa8.63□□□□□ -1.03
SCLT1-201ENST00000281142 CLPSL1A2RUU4 121 aa8.62□□□□□ -1.03
SCLT1-201ENST00000281142 M0R381 172 aa8.62□□□□□ -1.03
SCLT1-201ENST00000281142 SMIM20Q8N5G0 67 aa8.62□□□□□ -1.03
SCLT1-201ENST00000281142 ZNF469Q96JG9 3925 aaPredicted RBP8.62□□□□□ -1.03
SCLT1-201ENST00000281142 IGHV7-81A0A0B4J1V7 117 aa8.62□□□□□ -1.03
SCLT1-201ENST00000281142 ZNF815PA8K554 130 aa8.62□□□□□ -1.03
SCLT1-201ENST00000281142 SLC25A16P16260 332 aa8.62□□□□□ -1.03
SCLT1-201ENST00000281142 BRI3O95415 125 aa8.62□□□□□ -1.03
SCLT1-201ENST00000281142 RPL32P62910 135 aaKnown RBP8.62□□□□□ -1.03
SCLT1-201ENST00000281142 TEN1Q86WV5 123 aa8.62□□□□□ -1.03
SCLT1-201ENST00000281142 TEX29Q8N6K0 151 aa8.62□□□□□ -1.03
SCLT1-201ENST00000281142 NEXN-AS1Q8NBZ9 246 aa8.62□□□□□ -1.03
SCLT1-201ENST00000281142 OR11H6Q8NGC7 330 aa8.62□□□□□ -1.03
SCLT1-201ENST00000281142 RASL10AQ92737 203 aa8.62□□□□□ -1.03
SCLT1-201ENST00000281142 CITED1Q99966 193 aa8.62□□□□□ -1.03
SCLT1-201ENST00000281142 ATP5J2P56134 94 aa8.61□□□□□ -1.03
SCLT1-201ENST00000281142 CLEC19AQ6UXS0 136 aa8.61□□□□□ -1.03
SCLT1-201ENST00000281142 LY6G5BQ8NDX9 201 aa8.61□□□□□ -1.03
SCLT1-201ENST00000281142 BAHCC1Q9P281 2608 aa8.61□□□□□ -1.03
SCLT1-201ENST00000281142 SCGB1D4Q6XE38 83 aa8.61□□□□□ -1.03
SCLT1-201ENST00000281142 BAALCQ8WXS3 180 aa8.61□□□□□ -1.03
SCLT1-201ENST00000281142 CCDC179H3BU77 68 aa8.6□□□□□ -1.03
SCLT1-201ENST00000281142 C14orf178Q8N769 122 aaPredicted RBP8.6□□□□□ -1.03
SCLT1-201ENST00000281142 TRAV12-1A0A0B4J245 112 aa8.6□□□□□ -1.03
SCLT1-201ENST00000281142 ODF3BA8MYP8 253 aa8.6□□□□□ -1.03
SCLT1-201ENST00000281142 G3V318 75 aa8.6□□□□□ -1.03
SCLT1-201ENST00000281142 AJUBAQ96IF1 538 aa8.6□□□□□ -1.03
SCLT1-201ENST00000281142 RNF223E7ERA6 249 aa8.6□□□□□ -1.03
SCLT1-201ENST00000281142 ZNF688P0C7X2 276 aa8.6□□□□□ -1.03
SCLT1-201ENST00000281142 SUMO2P61956 95 aaKnown RBP8.6□□□□□ -1.03
SCLT1-201ENST00000281142 SRSF9Q13242 221 aaKnown RBP eCLIP8.6□□□□□ -1.03
SCLT1-201ENST00000281142 C2orf66Q6UXQ4 117 aa8.6□□□□□ -1.03
SCLT1-201ENST00000281142 TOMM6Q96B49 74 aa8.6□□□□□ -1.03
SCLT1-201ENST00000281142 CCDC140Q96MF4 163 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms