RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 C7orf71A4D174 169 aa15.54■□□□□ 0.08
YBX3-202ENST00000279550 GATA1P15976 413 aaPredicted RBP15.54■□□□□ 0.08
YBX3-202ENST00000279550 FA2HQ7L5A8 372 aa15.54■□□□□ 0.08
YBX3-202ENST00000279550 SPATA12Q7Z6I5 190 aa15.54■□□□□ 0.08
YBX3-202ENST00000279550 TSTD3H0UI37 97 aa15.53■□□□□ 0.08
YBX3-202ENST00000279550 PF4P02776 101 aa15.53■□□□□ 0.08
YBX3-202ENST00000279550 FOXI2Q6ZQN5 318 aa15.53■□□□□ 0.08
YBX3-202ENST00000279550 SCRT2Q9NQ03 307 aa15.53■□□□□ 0.08
YBX3-202ENST00000279550 ATRQ13535 2644 aa15.52■□□□□ 0.08
YBX3-202ENST00000279550 KNCNA6PVL3 124 aa15.52■□□□□ 0.08
YBX3-202ENST00000279550 RNASE3P12724 160 aaKnown RBP15.52■□□□□ 0.08
YBX3-202ENST00000279550 AMTNQ6UX39 209 aa15.52■□□□□ 0.08
YBX3-202ENST00000279550 TRAV12-2A0A075B6T6 113 aa15.51■□□□□ 0.07
YBX3-202ENST00000279550 DUSP14O95147 198 aaKnown RBP15.51■□□□□ 0.07
YBX3-202ENST00000279550 MED14OSP0DP75 135 aa15.51■□□□□ 0.07
YBX3-202ENST00000279550 S100A4P26447 101 aaKnown RBP15.51■□□□□ 0.07
YBX3-202ENST00000279550 DEFB114Q30KQ6 69 aa15.51■□□□□ 0.07
YBX3-202ENST00000279550 DYNLRB2Q8TF09 96 aa15.51■□□□□ 0.07
YBX3-202ENST00000279550 AP5S1Q9NUS5 200 aa15.51■□□□□ 0.07
YBX3-202ENST00000279550 DEFB131AP59861 70 aa15.51■□□□□ 0.07
YBX3-202ENST00000279550 SPINK13Q1W4C9 94 aa15.51■□□□□ 0.07
YBX3-202ENST00000279550 TENM1Q9UKZ4 2725 aa15.5■□□□□ 0.07
YBX3-202ENST00000279550 AGRNO00468 2067 aa15.5■□□□□ 0.07
YBX3-202ENST00000279550 KIR2DL5BA0A0G2JN68 375 aa15.5■□□□□ 0.07
YBX3-202ENST00000279550 KIR2DL5BA0A0G2JPC4 375 aa15.5■□□□□ 0.07
YBX3-202ENST00000279550 M0R381 172 aa15.5■□□□□ 0.07
YBX3-202ENST00000279550 DDTP30046 118 aa15.5■□□□□ 0.07
YBX3-202ENST00000279550 KIR2DL5AQ8N109 375 aa15.5■□□□□ 0.07
YBX3-202ENST00000279550 TRAV2A0A0B4J234 112 aa15.49■□□□□ 0.07
YBX3-202ENST00000279550 LEPROTL1O95214 131 aa15.49■□□□□ 0.07
YBX3-202ENST00000279550 PPBPP02775 128 aa15.49■□□□□ 0.07
YBX3-202ENST00000279550 BTF3P20290 206 aaKnown RBP15.49■□□□□ 0.07
YBX3-202ENST00000279550 ZNF124Q15973 351 aa15.49■□□□□ 0.07
YBX3-202ENST00000279550 LINC00482Q8N8I6 264 aa15.49■□□□□ 0.07
YBX3-202ENST00000279550 TMEM158Q8WZ71 300 aa15.49■□□□□ 0.07
YBX3-202ENST00000279550 A0A096LNJ9 63 aa15.48■□□□□ 0.07
YBX3-202ENST00000279550 TRAV26-2A0A0B4J265 109 aa15.48■□□□□ 0.07
YBX3-202ENST00000279550 TNFRSF6BO95407 300 aa15.48■□□□□ 0.07
YBX3-202ENST00000279550 CD300EQ496F6 205 aaPredicted RBP15.48■□□□□ 0.07
YBX3-202ENST00000279550 FAM159AQ6UWV7 190 aa15.48■□□□□ 0.07
YBX3-202ENST00000279550 SMIM15Q7Z3B0 74 aa15.48■□□□□ 0.07
YBX3-202ENST00000279550 ZNF747Q9BV97 191 aa15.48■□□□□ 0.07
YBX3-202ENST00000279550 PHLDA3Q9Y5J5 127 aa15.48■□□□□ 0.07
YBX3-202ENST00000279550 WNK1Q9H4A3 2382 aa15.48■□□□□ 0.07
YBX3-202ENST00000279550 RBMY1BA6NDE4 496 aaKnown RBP15.47■□□□□ 0.07
YBX3-202ENST00000279550 RBMY1EA6NEQ0 496 aaKnown RBP15.47■□□□□ 0.07
YBX3-202ENST00000279550 RBMY1DP0C7P1 496 aaKnown RBP15.47■□□□□ 0.07
YBX3-202ENST00000279550 CDKN1BP46527 198 aa15.47■□□□□ 0.07
YBX3-202ENST00000279550 FXYD7P58549 80 aa15.47■□□□□ 0.07
YBX3-202ENST00000279550 NXPH4O95158 308 aa15.46■□□□□ 0.07
YBX3-202ENST00000279550 ATOH7Q8N100 152 aa15.46■□□□□ 0.07
YBX3-202ENST00000279550 TMEM70Q9BUB7 260 aa15.46■□□□□ 0.07
YBX3-202ENST00000279550 VAMP8Q9BV40 100 aa15.46■□□□□ 0.07
YBX3-202ENST00000279550 MAP1LC3AQ9H492 121 aa15.46■□□□□ 0.07
YBX3-202ENST00000279550 MAP6D1Q9H9H5 199 aa15.46■□□□□ 0.07
YBX3-202ENST00000279550 PAM16Q9Y3D7 125 aa15.46■□□□□ 0.07
YBX3-202ENST00000279550 A8MTW9 85 aa15.46■□□□□ 0.06
YBX3-202ENST00000279550 SAP30O75446 220 aa15.46■□□□□ 0.06
YBX3-202ENST00000279550 HLA-DRB4P13762 266 aa15.46■□□□□ 0.06
YBX3-202ENST00000279550 TSPOP30536 169 aa15.46■□□□□ 0.06
YBX3-202ENST00000279550 C3orf56Q8N813 242 aa15.46■□□□□ 0.06
YBX3-202ENST00000279550 NRACQ8N912 160 aa15.46■□□□□ 0.06
YBX3-202ENST00000279550 SORL1Q92673 2214 aa15.46■□□□□ 0.06
YBX3-202ENST00000279550 LAMTOR2Q9Y2Q5 125 aa15.46■□□□□ 0.06
YBX3-202ENST00000279550 HLA-DRB4X5D2U9 266 aa15.46■□□□□ 0.06
YBX3-202ENST00000279550 H3BMM0 161 aa15.45■□□□□ 0.06
YBX3-202ENST00000279550 CD7P09564 240 aa15.45■□□□□ 0.06
YBX3-202ENST00000279550 OR2K2Q8NGT1 345 aa15.45■□□□□ 0.06
YBX3-202ENST00000279550 SYS1-DBNDD2H3BUS1 97 aa15.44■□□□□ 0.06
YBX3-202ENST00000279550 C12orf54Q6X4T0 127 aa15.44■□□□□ 0.06
YBX3-202ENST00000279550 MUC4Q99102 2169 aa15.43■□□□□ 0.06
YBX3-202ENST00000279550 IGHV3-16A0A0C4DH30 117 aa15.43■□□□□ 0.06
YBX3-202ENST00000279550 RBMY1A1P0DJD3 496 aaKnown RBP15.43■□□□□ 0.06
YBX3-202ENST00000279550 RBMY1CP0DJD4 496 aa15.43■□□□□ 0.06
YBX3-202ENST00000279550 RBMY1FQ15415 496 aaKnown RBP15.43■□□□□ 0.06
YBX3-202ENST00000279550 C14orf178Q8N769 122 aaPredicted RBP15.43■□□□□ 0.06
YBX3-202ENST00000279550 C20orf144Q9BQM9 153 aa15.43■□□□□ 0.06
YBX3-202ENST00000279550 ZNF256Q9Y2P7 627 aaPredicted RBP15.43■□□□□ 0.06
YBX3-202ENST00000279550 TRAV25A0A0B4J276 109 aa15.43■□□□□ 0.06
YBX3-202ENST00000279550 LINC01546A6NGU7 62 aa15.43■□□□□ 0.06
YBX3-202ENST00000279550 HSPB8Q9UJY1 196 aa15.43■□□□□ 0.06
YBX3-202ENST00000279550 IGHV1OR15-1A0A075B7D0 117 aa15.42■□□□□ 0.06
YBX3-202ENST00000279550 CRXO43186 299 aaPredicted RBP15.42■□□□□ 0.06
YBX3-202ENST00000279550 MAJINQ3KP22 176 aa15.42■□□□□ 0.06
YBX3-202ENST00000279550 SHISA2Q6UWI4 295 aa15.42■□□□□ 0.06
YBX3-202ENST00000279550 SPAG8Q99932 426 aaPredicted RBP15.42■□□□□ 0.06
YBX3-202ENST00000279550 DPH3P1Q9H4G8 78 aa15.42■□□□□ 0.06
YBX3-202ENST00000279550 MDFICQ9P1T7 246 aa15.42■□□□□ 0.06
YBX3-202ENST00000279550 IGLV2-18A0A075B6J9 118 aa15.41■□□□□ 0.06
YBX3-202ENST00000279550 OR4C46A6NHA9 309 aa15.41■□□□□ 0.06
YBX3-202ENST00000279550 IGLV1-51P01701 117 aa15.41■□□□□ 0.06
YBX3-202ENST00000279550 Q8N1Y9 231 aa15.41■□□□□ 0.06
YBX3-202ENST00000279550 MRAP2Q96G30 205 aa15.41■□□□□ 0.06
YBX3-202ENST00000279550 C14orf144Q96I85 54 aa15.41■□□□□ 0.06
YBX3-202ENST00000279550 C9orf85Q96MD7 179 aa15.41■□□□□ 0.06
YBX3-202ENST00000279550 MCRIP2Q9BUT9 160 aaKnown RBP15.41■□□□□ 0.06
YBX3-202ENST00000279550 JPT2Q9H910 190 aa15.4■□□□□ 0.06
YBX3-202ENST00000279550 DEFA6Q01524 100 aa15.4■□□□□ 0.06
YBX3-202ENST00000279550 SPATA45Q537H7 98 aa15.4■□□□□ 0.06
YBX3-202ENST00000279550 SPATA3Q8NHX4 192 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms