RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 OR4C5Q8NGB2 326 aa18.9■□□□□ 0.62
ROM1-201ENST00000278833 MYOZ3Q8TDC0 251 aa18.9■□□□□ 0.62
ROM1-201ENST00000278833 OTOGQ6ZRI0 2925 aa18.9■□□□□ 0.62
ROM1-201ENST00000278833 C7orf71A4D174 169 aa18.89■□□□□ 0.61
ROM1-201ENST00000278833 FOXC2Q99958 501 aa18.89■□□□□ 0.61
ROM1-201ENST00000278833 TRAV12-1A0A0B4J245 112 aa18.88■□□□□ 0.61
ROM1-201ENST00000278833 ORMDL2Q53FV1 153 aa18.88■□□□□ 0.61
ROM1-201ENST00000278833 PCP2Q8IVA1 136 aa18.88■□□□□ 0.61
ROM1-201ENST00000278833 ZNF469Q96JG9 3925 aaPredicted RBP18.88■□□□□ 0.61
ROM1-201ENST00000278833 TRAV26-2A0A0B4J265 109 aa18.88■□□□□ 0.61
ROM1-201ENST00000278833 KLLNB2CW77 178 aa18.88■□□□□ 0.61
ROM1-201ENST00000278833 PPP1R17O96001 155 aa18.88■□□□□ 0.61
ROM1-201ENST00000278833 ANXA2RQ3ZCQ2 193 aa18.88■□□□□ 0.61
ROM1-201ENST00000278833 LRRC75A-AS1Q8N1F1 130 aa18.88■□□□□ 0.61
ROM1-201ENST00000278833 NMUP48645 174 aa18.87■□□□□ 0.61
ROM1-201ENST00000278833 Q6ZS46 218 aa18.87■□□□□ 0.61
ROM1-201ENST00000278833 ODF3Q96PU9 254 aa18.87■□□□□ 0.61
ROM1-201ENST00000278833 A0A087WX48 190 aa18.86■□□□□ 0.61
ROM1-201ENST00000278833 PSMB8P28062 276 aa18.86■□□□□ 0.61
ROM1-201ENST00000278833 SUMO2P61956 95 aaKnown RBP18.86■□□□□ 0.61
ROM1-201ENST00000278833 RPL32P62910 135 aaKnown RBP18.86■□□□□ 0.61
ROM1-201ENST00000278833 RASL10AQ92737 203 aa18.86■□□□□ 0.61
ROM1-201ENST00000278833 CELSR1Q9NYQ6 3014 aa18.85■□□□□ 0.61
ROM1-201ENST00000278833 AVPP01185 164 aa18.85■□□□□ 0.61
ROM1-201ENST00000278833 S100A4P26447 101 aaKnown RBP18.85■□□□□ 0.61
ROM1-201ENST00000278833 ID1P41134 155 aa18.85■□□□□ 0.61
ROM1-201ENST00000278833 TM4SF20Q53R12 229 aa18.85■□□□□ 0.61
ROM1-201ENST00000278833 AP1S3Q96PC3 154 aa18.85■□□□□ 0.61
ROM1-201ENST00000278833 PHLDA3Q9Y5J5 127 aa18.85■□□□□ 0.61
ROM1-201ENST00000278833 C9orf118A6NHY6 69 aa18.84■□□□□ 0.61
ROM1-201ENST00000278833 J3QLI3 93 aa18.84■□□□□ 0.61
ROM1-201ENST00000278833 RNASE3P12724 160 aaKnown RBP18.84■□□□□ 0.61
ROM1-201ENST00000278833 ITPR3Q14573 2671 aa18.84■□□□□ 0.61
ROM1-201ENST00000278833 PLNP26678 52 aa18.84■□□□□ 0.61
ROM1-201ENST00000278833 KRTAP1-3Q8IUG1 177 aa18.84■□□□□ 0.61
ROM1-201ENST00000278833 DCANP1Q8TF63 244 aa18.84■□□□□ 0.61
ROM1-201ENST00000278833 TOMM6Q96B49 74 aa18.84■□□□□ 0.61
ROM1-201ENST00000278833 CBY1Q9Y3M2 126 aa18.84■□□□□ 0.61
ROM1-201ENST00000278833 IGKV2D-26A0A0A0MRZ7 120 aa18.83■□□□□ 0.6
ROM1-201ENST00000278833 TRAV8-6A0A0B4J262 113 aa18.83■□□□□ 0.6
ROM1-201ENST00000278833 AMMECR1LQ6DCA0 310 aa18.83■□□□□ 0.6
ROM1-201ENST00000278833 RNASE4P34096 147 aaKnown RBP18.82■□□□□ 0.6
ROM1-201ENST00000278833 RNF223E7ERA6 249 aa18.82■□□□□ 0.6
ROM1-201ENST00000278833 Q5PR19 223 aa18.82■□□□□ 0.6
ROM1-201ENST00000278833 A0A096LNT2 108 aa18.81■□□□□ 0.6
ROM1-201ENST00000278833 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.81■□□□□ 0.6
ROM1-201ENST00000278833 ZC2HC1BQ5TFG8 222 aa18.81■□□□□ 0.6
ROM1-201ENST00000278833 LINC01356Q8N9X3 169 aa18.81■□□□□ 0.6
ROM1-201ENST00000278833 MRPL35Q9NZE8 188 aaKnown RBP18.81■□□□□ 0.6
ROM1-201ENST00000278833 RPL11P62913 178 aaKnown RBP18.8■□□□□ 0.6
ROM1-201ENST00000278833 F6UB75 175 aa18.8■□□□□ 0.6
ROM1-201ENST00000278833 KIF25-AS1Q9Y6Z4 181 aa18.8■□□□□ 0.6
ROM1-201ENST00000278833 IGHV4OR15-8A0A075B7B6 117 aa18.79■□□□□ 0.6
ROM1-201ENST00000278833 A0A087WW49 117 aa18.79■□□□□ 0.6
ROM1-201ENST00000278833 LINC01549A6NIU2 74 aa18.79■□□□□ 0.6
ROM1-201ENST00000278833 F8VRH5 84 aa18.79■□□□□ 0.6
ROM1-201ENST00000278833 DEFB1P60022 68 aa18.79■□□□□ 0.6
ROM1-201ENST00000278833 J3KRW8 73 aa18.78■□□□□ 0.6
ROM1-201ENST00000278833 LCNL1Q6ZST4 164 aa18.78■□□□□ 0.6
ROM1-201ENST00000278833 WFDC11Q8NEX6 87 aa18.78■□□□□ 0.6
ROM1-201ENST00000278833 H7C1H1 209 aa18.77■□□□□ 0.6
ROM1-201ENST00000278833 UFSP1Q6NVU6 142 aa18.77■□□□□ 0.6
ROM1-201ENST00000278833 C14orf178Q8N769 122 aaPredicted RBP18.77■□□□□ 0.6
ROM1-201ENST00000278833 RNASE8Q8TDE3 154 aaKnown RBP18.77■□□□□ 0.6
ROM1-201ENST00000278833 CHAC1Q9BUX1 264 aa18.77■□□□□ 0.6
ROM1-201ENST00000278833 LINC01619G3V211 115 aa18.76■□□□□ 0.59
ROM1-201ENST00000278833 LINC00315P59091 139 aa18.76■□□□□ 0.59
ROM1-201ENST00000278833 TAL2Q16559 108 aa18.76■□□□□ 0.59
ROM1-201ENST00000278833 DEFB112Q30KQ8 113 aa18.76■□□□□ 0.59
ROM1-201ENST00000278833 ERASQ7Z444 233 aa18.76■□□□□ 0.59
ROM1-201ENST00000278833 GNRH2O43555 120 aa18.75■□□□□ 0.59
ROM1-201ENST00000278833 GTSCR1Q86UQ5 136 aa18.75■□□□□ 0.59
ROM1-201ENST00000278833 NEXN-AS1Q8NBZ9 246 aa18.75■□□□□ 0.59
ROM1-201ENST00000278833 Q96MF0 132 aa18.75■□□□□ 0.59
ROM1-201ENST00000278833 TRBV25-1A0A075B6N4 114 aa18.75■□□□□ 0.59
ROM1-201ENST00000278833 GTF2H5Q6ZYL4 71 aa18.75■□□□□ 0.59
ROM1-201ENST00000278833 RPL39LQ96EH5 51 aaKnown RBP18.75■□□□□ 0.59
ROM1-201ENST00000278833 TM2D2Q9BX73 214 aa18.75■□□□□ 0.59
ROM1-201ENST00000278833 TMEM160Q9NX00 188 aa18.75■□□□□ 0.59
ROM1-201ENST00000278833 FLNAP21333 2647 aaKnown RBP18.75■□□□□ 0.59
ROM1-201ENST00000278833 IGHV4-59P01825 116 aa18.74■□□□□ 0.59
ROM1-201ENST00000278833 TCTAP57738 103 aa18.74■□□□□ 0.59
ROM1-201ENST00000278833 RBX1P62877 108 aa18.74■□□□□ 0.59
ROM1-201ENST00000278833 LGALS9O00182 355 aa18.73■□□□□ 0.59
ROM1-201ENST00000278833 FSHBP01225 129 aa18.73■□□□□ 0.59
ROM1-201ENST00000278833 FAM159AQ6UWV7 190 aa18.73■□□□□ 0.59
ROM1-201ENST00000278833 RNF152Q8N8N0 203 aa18.73■□□□□ 0.59
ROM1-201ENST00000278833 SCGB3A1Q96QR1 104 aa18.73■□□□□ 0.59
ROM1-201ENST00000278833 JMJD8Q96S16 334 aa18.73■□□□□ 0.59
ROM1-201ENST00000278833 ACANP16112 2415 aa18.72■□□□□ 0.59
ROM1-201ENST00000278833 MGPP08493 103 aa18.72■□□□□ 0.59
ROM1-201ENST00000278833 TMEM95Q3KNT9 176 aa18.72■□□□□ 0.59
ROM1-201ENST00000278833 K7EP34 96 aa18.71■□□□□ 0.59
ROM1-201ENST00000278833 CDKN1BP46527 198 aa18.71■□□□□ 0.59
ROM1-201ENST00000278833 K7EQG2 157 aa18.71■□□□□ 0.59
ROM1-201ENST00000278833 C2orf66Q6UXQ4 117 aa18.71■□□□□ 0.59
ROM1-201ENST00000278833 C9orf85Q96MD7 179 aa18.71■□□□□ 0.59
ROM1-201ENST00000278833 CHTOPQ9Y3Y2 248 aaKnown RBP18.71■□□□□ 0.59
ROM1-201ENST00000278833 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.7■□□□□ 0.58
ROM1-201ENST00000278833 GAGE10A6NGK3 116 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms