RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 UBE2V1Q13404 147 aa6.85□□□□□ -1.31
SEC16A-201ENST00000277537 Q6YL49 198 aa6.85□□□□□ -1.31
SEC16A-201ENST00000277537 TP53TG3Q9ULZ0 132 aa6.85□□□□□ -1.31
SEC16A-201ENST00000277537 MRPS12O15235 138 aaKnown RBP6.85□□□□□ -1.31
SEC16A-201ENST00000277537 OXLD1Q5BKU9 147 aa6.85□□□□□ -1.31
SEC16A-201ENST00000277537 Q6ZQT7 251 aa6.85□□□□□ -1.31
SEC16A-201ENST00000277537 KIR2DL4Q99706 377 aa6.85□□□□□ -1.31
SEC16A-201ENST00000277537 XCL2Q9UBD3 114 aa6.85□□□□□ -1.31
SEC16A-201ENST00000277537 H3BUT2 72 aa6.84□□□□□ -1.31
SEC16A-201ENST00000277537 NXT2Q9NPJ8 142 aaKnown RBP6.84□□□□□ -1.31
SEC16A-201ENST00000277537 GCSHP23434 173 aa6.84□□□□□ -1.31
SEC16A-201ENST00000277537 DGAT2L7PQ6IED9 249 aa6.84□□□□□ -1.31
SEC16A-201ENST00000277537 C18orf65Q6ZTR6 163 aa6.84□□□□□ -1.31
SEC16A-201ENST00000277537 OR2K2Q8NGT1 345 aa6.84□□□□□ -1.31
SEC16A-201ENST00000277537 TMEM158Q8WZ71 300 aa6.84□□□□□ -1.31
SEC16A-201ENST00000277537 SCGB3A1Q96QR1 104 aa6.84□□□□□ -1.31
SEC16A-201ENST00000277537 COX11Q9Y6N1 276 aa6.84□□□□□ -1.31
SEC16A-201ENST00000277537 TRAV8-2A0A0B4J237 113 aa6.84□□□□□ -1.31
SEC16A-201ENST00000277537 RBAKDNA6NC62 111 aa6.84□□□□□ -1.31
SEC16A-201ENST00000277537 GTF2H5Q6ZYL4 71 aa6.84□□□□□ -1.31
SEC16A-201ENST00000277537 NEGR1Q7Z3B1 354 aa6.84□□□□□ -1.31
SEC16A-201ENST00000277537 APRG1Q8IVJ8 170 aa6.84□□□□□ -1.31
SEC16A-201ENST00000277537 A0A1B0GXF2 115 aa6.83□□□□□ -1.32
SEC16A-201ENST00000277537 SRSF2Q01130 221 aaKnown RBP6.83□□□□□ -1.32
SEC16A-201ENST00000277537 ZNF876PQ49A33 203 aa6.83□□□□□ -1.32
SEC16A-201ENST00000277537 C12orf54Q6X4T0 127 aa6.83□□□□□ -1.32
SEC16A-201ENST00000277537 GPHB5Q86YW7 130 aa6.83□□□□□ -1.32
SEC16A-201ENST00000277537 TRAV8-6A0A0B4J262 113 aa6.83□□□□□ -1.32
SEC16A-201ENST00000277537 IGKV3D-20A0A0C4DH25 116 aa6.83□□□□□ -1.32
SEC16A-201ENST00000277537 C2orf70A6NJV1 201 aa6.83□□□□□ -1.32
SEC16A-201ENST00000277537 RPL35AP18077 110 aaKnown RBP6.83□□□□□ -1.32
SEC16A-201ENST00000277537 SFTA2Q6UW10 78 aa6.83□□□□□ -1.32
SEC16A-201ENST00000277537 DPH3P1Q9H4G8 78 aa6.83□□□□□ -1.32
SEC16A-201ENST00000277537 ZANQ9Y493 2812 aa6.83□□□□□ -1.32
SEC16A-201ENST00000277537 DNAJC9-AS1A6NH13 148 aa6.83□□□□□ -1.32
SEC16A-201ENST00000277537 CDKN1BP46527 198 aa6.83□□□□□ -1.32
SEC16A-201ENST00000277537 SRSF1Q07955 248 aaKnown RBP eCLIP6.83□□□□□ -1.322e-6■■■□□ 18.9
SEC16A-201ENST00000277537 TEX15Q9BXT5 2789 aa6.83□□□□□ -1.32
SEC16A-201ENST00000277537 PSMB8P28062 276 aa6.82□□□□□ -1.32
SEC16A-201ENST00000277537 C9orf47Q6ZRZ4 202 aa6.82□□□□□ -1.32
SEC16A-201ENST00000277537 AGRNO00468 2067 aa6.82□□□□□ -1.32
SEC16A-201ENST00000277537 A6NJY4 79 aa6.82□□□□□ -1.32
SEC16A-201ENST00000277537 PET117Q6UWS5 81 aa6.82□□□□□ -1.32
SEC16A-201ENST00000277537 LRRC75A-AS1Q8N1F1 130 aa6.82□□□□□ -1.32
SEC16A-201ENST00000277537 MRPL53Q96EL3 112 aaKnown RBP6.82□□□□□ -1.32
SEC16A-201ENST00000277537 ST20Q9HBF5 79 aa6.82□□□□□ -1.32
SEC16A-201ENST00000277537 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.82□□□□□ -1.32
SEC16A-201ENST00000277537 PLA2G2AP14555 144 aa6.82□□□□□ -1.32
SEC16A-201ENST00000277537 SPENQ96T58 3664 aaKnown RBP6.82□□□□□ -1.32
SEC16A-201ENST00000277537 NPIPB6E9PJ23 425 aa6.82□□□□□ -1.32
SEC16A-201ENST00000277537 RRN3P1Q2M238 152 aa6.82□□□□□ -1.32
SEC16A-201ENST00000277537 SCGB1D4Q6XE38 83 aa6.82□□□□□ -1.32
SEC16A-201ENST00000277537 TRBV6-1A0A0K0K1D8 114 aa6.81□□□□□ -1.32
SEC16A-201ENST00000277537 OR11H12B2RN74 326 aa6.81□□□□□ -1.32
SEC16A-201ENST00000277537 CCL24O00175 119 aa6.81□□□□□ -1.32
SEC16A-201ENST00000277537 KLF5Q13887 457 aaPredicted RBP6.81□□□□□ -1.32
SEC16A-201ENST00000277537 LAGE3Q14657 143 aa6.81□□□□□ -1.32
SEC16A-201ENST00000277537 LINC01559Q495D7 138 aa6.81□□□□□ -1.32
SEC16A-201ENST00000277537 TMEM97Q5BJF2 176 aa6.81□□□□□ -1.32
SEC16A-201ENST00000277537 TMEM61Q8N0U2 210 aa6.81□□□□□ -1.32
SEC16A-201ENST00000277537 OR9G4Q8NGQ1 327 aa6.81□□□□□ -1.32
SEC16A-201ENST00000277537 DLX4Q92988 240 aaPredicted RBP6.81□□□□□ -1.32
SEC16A-201ENST00000277537 SMR3AQ99954 134 aa6.81□□□□□ -1.32
SEC16A-201ENST00000277537 CSTL1Q9H114 145 aa6.81□□□□□ -1.32
SEC16A-201ENST00000277537 K7EMT4 169 aa6.81□□□□□ -1.32
SEC16A-201ENST00000277537 IGLV1-40P01703 118 aa6.81□□□□□ -1.32
SEC16A-201ENST00000277537 IGHV3-53P01767 116 aa6.81□□□□□ -1.32
SEC16A-201ENST00000277537 JMJD8Q96S16 334 aa6.81□□□□□ -1.32
SEC16A-201ENST00000277537 ZNF702PQ9H963 129 aa6.81□□□□□ -1.32
SEC16A-201ENST00000277537 GAGE12BA1L429 117 aa6.81□□□□□ -1.32
SEC16A-201ENST00000277537 ATP5LO75964 103 aa6.81□□□□□ -1.32
SEC16A-201ENST00000277537 LINC00310P59036 64 aa6.81□□□□□ -1.32
SEC16A-201ENST00000277537 ATP6V0BQ99437 205 aa6.81□□□□□ -1.32
SEC16A-201ENST00000277537 CITED2Q99967 270 aaPredicted RBP6.81□□□□□ -1.32
SEC16A-201ENST00000277537 TNFRSF18Q9Y5U5 241 aa6.81□□□□□ -1.32
SEC16A-201ENST00000277537 IGHV1OR15-1A0A075B7D0 117 aa6.8□□□□□ -1.32
SEC16A-201ENST00000277537 C11orf21Q9P2W6 132 aa6.8□□□□□ -1.32
SEC16A-201ENST00000277537 ORAOV1Q8WV07 137 aa6.8□□□□□ -1.32
SEC16A-201ENST00000277537 TRGV11A0A075B6L2 103 aa6.8□□□□□ -1.32
SEC16A-201ENST00000277537 GAGE1Q13065 139 aa6.8□□□□□ -1.32
SEC16A-201ENST00000277537 PRR9Q5T870 116 aa6.8□□□□□ -1.32
SEC16A-201ENST00000277537 Q6ZSV7 163 aa6.8□□□□□ -1.32
SEC16A-201ENST00000277537 CST9LQ9H4G1 147 aa6.8□□□□□ -1.32
SEC16A-201ENST00000277537 JPT2Q9H910 190 aa6.8□□□□□ -1.32
SEC16A-201ENST00000277537 IGHV3-16A0A0C4DH30 117 aa6.79□□□□□ -1.32
SEC16A-201ENST00000277537 MTURNQ8N3F0 131 aa6.79□□□□□ -1.32
SEC16A-201ENST00000277537 RPL39LQ96EH5 51 aaKnown RBP6.79□□□□□ -1.32
SEC16A-201ENST00000277537 LENEPQ9Y5L5 61 aa6.79□□□□□ -1.32
SEC16A-201ENST00000277537 CD28P10747 220 aa6.79□□□□□ -1.32
SEC16A-201ENST00000277537 SUMO2P61956 95 aaKnown RBP6.79□□□□□ -1.32
SEC16A-201ENST00000277537 CD300EQ496F6 205 aaPredicted RBP6.79□□□□□ -1.32
SEC16A-201ENST00000277537 TMEM170BQ5T4T1 132 aa6.79□□□□□ -1.32
SEC16A-201ENST00000277537 GTSCR1Q86UQ5 136 aa6.79□□□□□ -1.32
SEC16A-201ENST00000277537 TRGV2A0A075B6R0 118 aa6.79□□□□□ -1.32
SEC16A-201ENST00000277537 TRGV1A0A0A0MS02 117 aa6.79□□□□□ -1.32
SEC16A-201ENST00000277537 A6NDN8 102 aa6.79□□□□□ -1.32
SEC16A-201ENST00000277537 PPP1R17O96001 155 aa6.79□□□□□ -1.32
SEC16A-201ENST00000277537 CTRLP40313 264 aa6.79□□□□□ -1.32
SEC16A-201ENST00000277537 K7EMI3 77 aa6.78□□□□□ -1.32
SEC16A-201ENST00000277537 F8P00451 2351 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms