RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 SLC50A1Q9BRV3 221 aa7.9□□□□□ -1.14
UPF3B-201ENST00000276201 SIRPDQ9H106 197 aa7.9□□□□□ -1.14
UPF3B-201ENST00000276201 C21orf62Q9NYP8 219 aa7.9□□□□□ -1.14
UPF3B-201ENST00000276201 IGHV3OR16-10A0A075B7F0 116 aa7.9□□□□□ -1.15
UPF3B-201ENST00000276201 H7C1H1 209 aa7.9□□□□□ -1.15
UPF3B-201ENST00000276201 C5orf64Q2M2E5 130 aa7.9□□□□□ -1.15
UPF3B-201ENST00000276201 TM4SF20Q53R12 229 aa7.9□□□□□ -1.15
UPF3B-201ENST00000276201 MAPKAPK5-AS1Q8N8E1 139 aa7.9□□□□□ -1.15
UPF3B-201ENST00000276201 MRAP2Q96G30 205 aa7.9□□□□□ -1.15
UPF3B-201ENST00000276201 GTSF1LQ9H1H1 148 aa7.9□□□□□ -1.15
UPF3B-201ENST00000276201 MRPL35Q9NZE8 188 aaKnown RBP7.9□□□□□ -1.15
UPF3B-201ENST00000276201 TRAV40A0A0B4J280 105 aa7.89□□□□□ -1.15
UPF3B-201ENST00000276201 NCBP2LA6PVI3 153 aaKnown RBP7.89□□□□□ -1.15
UPF3B-201ENST00000276201 ORM1P02763 201 aa7.89□□□□□ -1.15
UPF3B-201ENST00000276201 CCDC144NLQ6NUI1 221 aa7.89□□□□□ -1.15
UPF3B-201ENST00000276201 VCX2Q9H322 139 aa7.89□□□□□ -1.15
UPF3B-201ENST00000276201 MSRB1Q9NZV6 116 aa7.89□□□□□ -1.15
UPF3B-201ENST00000276201 ONECUT1Q9UBC0 465 aa7.89□□□□□ -1.15
UPF3B-201ENST00000276201 F8VRH5 84 aa7.89□□□□□ -1.15
UPF3B-201ENST00000276201 TIMM23O14925 209 aa7.89□□□□□ -1.15
UPF3B-201ENST00000276201 SCGB2A2Q13296 93 aa7.89□□□□□ -1.15
UPF3B-201ENST00000276201 DPM3Q9P2X0 92 aa7.89□□□□□ -1.15
UPF3B-201ENST00000276201 FBN1P35555 2871 aaKnown RBP7.89□□□□□ -1.15
UPF3B-201ENST00000276201 OOSP1A8MZH6 123 aa7.88□□□□□ -1.15
UPF3B-201ENST00000276201 H3BMG7 143 aa7.88□□□□□ -1.15
UPF3B-201ENST00000276201 SMAGPQ0VAQ4 97 aa7.88□□□□□ -1.15
UPF3B-201ENST00000276201 WFDC3Q8IUB2 231 aa7.88□□□□□ -1.15
UPF3B-201ENST00000276201 AGRNO00468 2067 aa7.88□□□□□ -1.15
UPF3B-201ENST00000276201 CENPVL3A0A0U1RRI6 287 aa7.88□□□□□ -1.15
UPF3B-201ENST00000276201 MYMXA0A1B0GTQ4 84 aa7.88□□□□□ -1.15
UPF3B-201ENST00000276201 GAS8-AS1O95177 125 aa7.88□□□□□ -1.15
UPF3B-201ENST00000276201 TCTAP57738 103 aa7.88□□□□□ -1.15
UPF3B-201ENST00000276201 EBI3Q14213 229 aa7.88□□□□□ -1.15
UPF3B-201ENST00000276201 VMO1Q7Z5L0 202 aa7.88□□□□□ -1.15
UPF3B-201ENST00000276201 TTTY13Q9BZ97 58 aa7.88□□□□□ -1.15
UPF3B-201ENST00000276201 ODF3BA8MYP8 253 aa7.87□□□□□ -1.15
UPF3B-201ENST00000276201 M0R1W7 72 aa7.87□□□□□ -1.15
UPF3B-201ENST00000276201 CTSGP08311 255 aa7.87□□□□□ -1.15
UPF3B-201ENST00000276201 DLX1P56177 255 aa7.87□□□□□ -1.15
UPF3B-201ENST00000276201 PRB3Q04118 309 aaPredicted RBP7.87□□□□□ -1.15
UPF3B-201ENST00000276201 KLRD1Q13241 179 aa7.87□□□□□ -1.15
UPF3B-201ENST00000276201 ORMDL2Q53FV1 153 aa7.87□□□□□ -1.15
UPF3B-201ENST00000276201 BRD3OSQ6XYD6 125 aa7.87□□□□□ -1.15
UPF3B-201ENST00000276201 C9orf139Q6ZV77 190 aa7.87□□□□□ -1.15
UPF3B-201ENST00000276201 Q8TAT8 98 aa7.87□□□□□ -1.15
UPF3B-201ENST00000276201 HIST1H4GQ99525 98 aa7.87□□□□□ -1.15
UPF3B-201ENST00000276201 COL6A5A8TX70 2615 aa7.87□□□□□ -1.15
UPF3B-201ENST00000276201 IGKV3D-20A0A0C4DH25 116 aa7.86□□□□□ -1.15
UPF3B-201ENST00000276201 IGHV7-4-1A0A0J9YVY3 117 aa7.86□□□□□ -1.15
UPF3B-201ENST00000276201 TMEM238LA0A1B0GVL6 79 aa7.86□□□□□ -1.15
UPF3B-201ENST00000276201 LINC01549A6NIU2 74 aa7.86□□□□□ -1.15
UPF3B-201ENST00000276201 A6NJY4 79 aa7.86□□□□□ -1.15
UPF3B-201ENST00000276201 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.86□□□□□ -1.15
UPF3B-201ENST00000276201 LYRM7Q5U5X0 104 aa7.86□□□□□ -1.15
UPF3B-201ENST00000276201 MORN3Q6PF18 240 aaPredicted RBP7.86□□□□□ -1.15
UPF3B-201ENST00000276201 DYNAPQ8N1N2 210 aa7.86□□□□□ -1.15
UPF3B-201ENST00000276201 Q8N6K4 173 aa7.86□□□□□ -1.15
UPF3B-201ENST00000276201 MDFIQ99750 246 aa7.86□□□□□ -1.15
UPF3B-201ENST00000276201 C20orf78Q9BR46 151 aa7.86□□□□□ -1.15
UPF3B-201ENST00000276201 C1QTNF4Q9BXJ3 329 aa7.86□□□□□ -1.15
UPF3B-201ENST00000276201 LENEPQ9Y5L5 61 aa7.86□□□□□ -1.15
UPF3B-201ENST00000276201 OR11H12B2RN74 326 aa7.86□□□□□ -1.15
UPF3B-201ENST00000276201 ETDBQ3ZM63 59 aa7.86□□□□□ -1.15
UPF3B-201ENST00000276201 C1orf122Q6ZSJ8 110 aa7.86□□□□□ -1.15
UPF3B-201ENST00000276201 OR11H1Q8NG94 326 aa7.86□□□□□ -1.15
UPF3B-201ENST00000276201 OR11H2Q8NH07 326 aa7.86□□□□□ -1.15
UPF3B-201ENST00000276201 ZNF418Q8TF45 676 aaPredicted RBP7.86□□□□□ -1.15
UPF3B-201ENST00000276201 TOMM6Q96B49 74 aa7.86□□□□□ -1.15
UPF3B-201ENST00000276201 IGHV1-69DA0A0B4J2H0 117 aa7.85□□□□□ -1.15
UPF3B-201ENST00000276201 HOXA3O43365 443 aaPredicted RBP7.85□□□□□ -1.15
UPF3B-201ENST00000276201 IGHV1-69P01742 117 aa7.85□□□□□ -1.15
UPF3B-201ENST00000276201 COX7A1P24310 79 aa7.85□□□□□ -1.15
UPF3B-201ENST00000276201 UBE2D1P51668 147 aa7.85□□□□□ -1.15
UPF3B-201ENST00000276201 HILS1P60008 231 aa7.85□□□□□ -1.15
UPF3B-201ENST00000276201 FOXI1Q12951 378 aa7.85□□□□□ -1.15
UPF3B-201ENST00000276201 ERCC8Q13216 396 aa7.85□□□□□ -1.15
UPF3B-201ENST00000276201 KRTAP24-1Q3LI83 254 aa7.85□□□□□ -1.15
UPF3B-201ENST00000276201 CFAP126Q5VTH2 177 aa7.85□□□□□ -1.15
UPF3B-201ENST00000276201 C9orf47Q6ZRZ4 202 aa7.85□□□□□ -1.15
UPF3B-201ENST00000276201 SMIM2Q9BVW6 85 aa7.85□□□□□ -1.15
UPF3B-201ENST00000276201 ESM1Q9NQ30 184 aa7.85□□□□□ -1.15
UPF3B-201ENST00000276201 MRPL16Q9NX20 251 aaKnown RBP7.85□□□□□ -1.15
UPF3B-201ENST00000276201 SELENOKQ9Y6D0 94 aa7.85□□□□□ -1.15
UPF3B-201ENST00000276201 M0QXV9 152 aa7.85□□□□□ -1.15
UPF3B-201ENST00000276201 M0R381 172 aa7.85□□□□□ -1.15
UPF3B-201ENST00000276201 MED14OSP0DP75 135 aa7.85□□□□□ -1.15
UPF3B-201ENST00000276201 GATA1P15976 413 aaPredicted RBP7.85□□□□□ -1.15
UPF3B-201ENST00000276201 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.85□□□□□ -1.15
UPF3B-201ENST00000276201 SBSPONQ8IVN8 264 aa7.85□□□□□ -1.15
UPF3B-201ENST00000276201 NEXN-AS1Q8NBZ9 246 aa7.85□□□□□ -1.15
UPF3B-201ENST00000276201 DLX4Q92988 240 aaPredicted RBP7.85□□□□□ -1.15
UPF3B-201ENST00000276201 PRTN3P24158 256 aa7.84□□□□□ -1.15
UPF3B-201ENST00000276201 CKS1BP61024 79 aa7.84□□□□□ -1.15
UPF3B-201ENST00000276201 RPL32P62910 135 aaKnown RBP7.84□□□□□ -1.15
UPF3B-201ENST00000276201 SH2D6Q7Z4S9 175 aa7.84□□□□□ -1.15
UPF3B-201ENST00000276201 ZFAND3Q9H8U3 227 aa7.84□□□□□ -1.15
UPF3B-201ENST00000276201 CYSLTR1Q9Y271 337 aa7.84□□□□□ -1.15
UPF3B-201ENST00000276201 BUB3O43684 328 aa7.84□□□□□ -1.15
UPF3B-201ENST00000276201 LGALS1P09382 135 aaKnown RBP7.84□□□□□ -1.15
UPF3B-201ENST00000276201 UBE2D3P61077 147 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms