RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 PRTN3P24158 256 aa9.84□□□□□ -0.83
COL8A1-202ENST00000273342 CRYBA4P53673 196 aa9.84□□□□□ -0.83
COL8A1-202ENST00000273342 PSMG4Q5JS54 123 aa9.84□□□□□ -0.83
COL8A1-202ENST00000273342 TMEM219Q86XT9 240 aa9.84□□□□□ -0.83
COL8A1-202ENST00000273342 Q8N9W7 124 aa9.84□□□□□ -0.83
COL8A1-202ENST00000273342 KIR2DL4Q99706 377 aa9.84□□□□□ -0.83
COL8A1-202ENST00000273342 TMEM238LA0A1B0GVL6 79 aa9.83□□□□□ -0.84
COL8A1-202ENST00000273342 NEXN-AS1Q8NBZ9 246 aa9.83□□□□□ -0.84
COL8A1-202ENST00000273342 LY6G5BQ8NDX9 201 aa9.83□□□□□ -0.84
COL8A1-202ENST00000273342 DLX4Q92988 240 aaPredicted RBP9.83□□□□□ -0.84
COL8A1-202ENST00000273342 C20orf173Q96LM9 149 aa9.83□□□□□ -0.84
COL8A1-202ENST00000273342 CACNA1AO00555 2505 aa9.83□□□□□ -0.84
COL8A1-202ENST00000273342 SCGB1C2P0DMR2 95 aa9.83□□□□□ -0.84
COL8A1-202ENST00000273342 SCGB1A1P11684 91 aa9.83□□□□□ -0.84
COL8A1-202ENST00000273342 SRD5A1P18405 259 aa9.83□□□□□ -0.84
COL8A1-202ENST00000273342 ZFP36P26651 326 aaKnown RBP9.83□□□□□ -0.84
COL8A1-202ENST00000273342 RNASE4P34096 147 aaKnown RBP9.83□□□□□ -0.84
COL8A1-202ENST00000273342 TIMD4Q96H15 378 aa9.83□□□□□ -0.84
COL8A1-202ENST00000273342 ZNF48Q96MX3 618 aaPredicted RBP9.83□□□□□ -0.84
COL8A1-202ENST00000273342 METTL26Q96S19 204 aa9.83□□□□□ -0.84
COL8A1-202ENST00000273342 JPT2Q9H910 190 aa9.83□□□□□ -0.84
COL8A1-202ENST00000273342 CRYBG3Q68DQ2 2970 aa9.83□□□□□ -0.84
COL8A1-202ENST00000273342 IGHV3-64A0A075B6Q5 118 aa9.82□□□□□ -0.84
COL8A1-202ENST00000273342 XGP55808 180 aa9.82□□□□□ -0.84
COL8A1-202ENST00000273342 RPL39P62891 51 aaKnown RBP9.82□□□□□ -0.84
COL8A1-202ENST00000273342 CFAP126Q5VTH2 177 aa9.82□□□□□ -0.84
COL8A1-202ENST00000273342 Q6ZS46 218 aa9.82□□□□□ -0.84
COL8A1-202ENST00000273342 SLC50A1Q9BRV3 221 aa9.82□□□□□ -0.84
COL8A1-202ENST00000273342 C1QTNF4Q9BXJ3 329 aa9.82□□□□□ -0.84
COL8A1-202ENST00000273342 CDIP1Q9H305 208 aa9.82□□□□□ -0.84
COL8A1-202ENST00000273342 RAX2Q96IS3 184 aa9.82□□□□□ -0.84
COL8A1-202ENST00000273342 ODF3BA8MYP8 253 aa9.82□□□□□ -0.84
COL8A1-202ENST00000273342 SRSF2Q01130 221 aaKnown RBP9.82□□□□□ -0.84
COL8A1-202ENST00000273342 ANXA2RQ3ZCQ2 193 aa9.82□□□□□ -0.84
COL8A1-202ENST00000273342 TMEM170BQ5T4T1 132 aa9.82□□□□□ -0.84
COL8A1-202ENST00000273342 C11orf86A6NJI1 115 aa9.81□□□□□ -0.84
COL8A1-202ENST00000273342 ORMDL2Q53FV1 153 aa9.81□□□□□ -0.84
COL8A1-202ENST00000273342 TOMM6Q96B49 74 aa9.81□□□□□ -0.84
COL8A1-202ENST00000273342 POLQO75417 2590 aa9.81□□□□□ -0.84
COL8A1-202ENST00000273342 GATA3P23771 443 aa9.81□□□□□ -0.84
COL8A1-202ENST00000273342 TMEM190Q8WZ59 177 aa9.81□□□□□ -0.84
COL8A1-202ENST00000273342 CSMD2Q7Z408 3487 aa9.81□□□□□ -0.84
COL8A1-202ENST00000273342 USP9YO00507 2555 aaPredicted RBP9.8□□□□□ -0.84
COL8A1-202ENST00000273342 A0A087WWL8 130 aa9.8□□□□□ -0.84
COL8A1-202ENST00000273342 F5H697 171 aa9.8□□□□□ -0.84
COL8A1-202ENST00000273342 TCL1BO95988 128 aa9.8□□□□□ -0.84
COL8A1-202ENST00000273342 MRAP2Q96G30 205 aa9.8□□□□□ -0.84
COL8A1-202ENST00000273342 TRBV12-3P01733 135 aa9.8□□□□□ -0.84
COL8A1-202ENST00000273342 CARD19Q96LW7 228 aa9.8□□□□□ -0.84
COL8A1-202ENST00000273342 IGHV3-11P01762 117 aa9.8□□□□□ -0.84
COL8A1-202ENST00000273342 TP53TG1Q9Y2A0 90 aa9.8□□□□□ -0.84
COL8A1-202ENST00000273342 FAM208BQ5VWN6 2430 aa9.8□□□□□ -0.84
COL8A1-202ENST00000273342 TRAV12-1A0A0B4J245 112 aa9.79□□□□□ -0.84
COL8A1-202ENST00000273342 RBAKDNA6NC62 111 aa9.79□□□□□ -0.84
COL8A1-202ENST00000273342 PRSS47A8MTI9 375 aa9.79□□□□□ -0.84
COL8A1-202ENST00000273342 FAM74A4Q5TZK3 123 aa9.79□□□□□ -0.84
COL8A1-202ENST00000273342 UNQ9165/PRO28630Q6UXU0 137 aa9.79□□□□□ -0.84
COL8A1-202ENST00000273342 OPRPNQ99935 248 aaPredicted RBP9.79□□□□□ -0.84
COL8A1-202ENST00000273342 A6NJY4 79 aa9.79□□□□□ -0.84
COL8A1-202ENST00000273342 Q8N6K4 173 aa9.79□□□□□ -0.84
COL8A1-202ENST00000273342 DPH3P1Q9H4G8 78 aa9.79□□□□□ -0.84
COL8A1-202ENST00000273342 ASIPP42127 132 aa9.78□□□□□ -0.84
COL8A1-202ENST00000273342 TSPEAR-AS2P59090 65 aa9.78□□□□□ -0.84
COL8A1-202ENST00000273342 Q6ZUT4 128 aa9.78□□□□□ -0.84
COL8A1-202ENST00000273342 FAM110DQ8TAY7 271 aaPredicted RBP9.78□□□□□ -0.84
COL8A1-202ENST00000273342 CRYGDP07320 174 aa9.78□□□□□ -0.84
COL8A1-202ENST00000273342 C9orf47Q6ZRZ4 202 aa9.77□□□□□ -0.84
COL8A1-202ENST00000273342 BEX4Q9NWD9 120 aaPredicted RBP9.77□□□□□ -0.84
COL8A1-202ENST00000273342 ZNF256Q9Y2P7 627 aaPredicted RBP9.77□□□□□ -0.84
COL8A1-202ENST00000273342 SAA4P35542 130 aa9.77□□□□□ -0.85
COL8A1-202ENST00000273342 NDUFA11Q86Y39 141 aa9.77□□□□□ -0.85
COL8A1-202ENST00000273342 RNF183Q96D59 192 aa9.77□□□□□ -0.85
COL8A1-202ENST00000273342 M0R1W7 72 aa9.77□□□□□ -0.85
COL8A1-202ENST00000273342 CRIP2P52943 208 aaPredicted RBP9.77□□□□□ -0.85
COL8A1-202ENST00000273342 TRPT1Q86TN4 253 aaKnown RBP9.77□□□□□ -0.85
COL8A1-202ENST00000273342 ZFAND2AQ8N6M9 145 aa9.77□□□□□ -0.85
COL8A1-202ENST00000273342 EEF1AKMT3Q96AZ1 226 aa9.77□□□□□ -0.85
COL8A1-202ENST00000273342 ZFYVE26Q68DK2 2539 aa9.76□□□□□ -0.85
COL8A1-202ENST00000273342 RNF223E7ERA6 249 aa9.76□□□□□ -0.85
COL8A1-202ENST00000273342 TSHBP01222 138 aa9.76□□□□□ -0.85
COL8A1-202ENST00000273342 IGKV3-20P01619 116 aa9.76□□□□□ -0.85
COL8A1-202ENST00000273342 CD7P09564 240 aa9.76□□□□□ -0.85
COL8A1-202ENST00000273342 OR10J6PQ8NGY7 276 aa9.76□□□□□ -0.85
COL8A1-202ENST00000273342 A0A0J9YY99 117 aa9.76□□□□□ -0.85
COL8A1-202ENST00000273342 CFC1BP0CG36 223 aa9.76□□□□□ -0.85
COL8A1-202ENST00000273342 CFC1P0CG37 223 aa9.76□□□□□ -0.85
COL8A1-202ENST00000273342 UBE2D1P51668 147 aa9.76□□□□□ -0.85
COL8A1-202ENST00000273342 ANKRD29Q8N6D5 301 aa9.76□□□□□ -0.85
COL8A1-202ENST00000273342 MUC4Q99102 2169 aa9.76□□□□□ -0.85
COL8A1-202ENST00000273342 COX6B1P14854 86 aa9.75□□□□□ -0.85
COL8A1-202ENST00000273342 UBTD1Q9HAC8 227 aa9.75□□□□□ -0.85
COL8A1-202ENST00000273342 TLN2Q9Y4G6 2542 aa9.75□□□□□ -0.85
COL8A1-202ENST00000273342 TCTEX1D4Q5JR98 221 aa9.75□□□□□ -0.85
COL8A1-202ENST00000273342 SETD2Q9BYW2 2564 aaPredicted RBP9.75□□□□□ -0.85
COL8A1-202ENST00000273342 TRAV21A0A0B4J279 112 aa9.74□□□□□ -0.85
COL8A1-202ENST00000273342 C9JAW5 83 aa9.74□□□□□ -0.85
COL8A1-202ENST00000273342 ACACBO00763 2458 aa9.74□□□□□ -0.85
COL8A1-202ENST00000273342 IGLV4-69A0A075B6H9 119 aa9.74□□□□□ -0.85
COL8A1-202ENST00000273342 IGHV4-4A0A075B6R2 117 aa9.74□□□□□ -0.85
COL8A1-202ENST00000273342 TRAV2A0A0B4J234 112 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms