RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 RBPMS2Q6ZRY4 209 aaKnown RBP9.42□□□□□ -0.9
CAPN9-201ENST00000271971 GTF2H5Q6ZYL4 71 aa9.42□□□□□ -0.9
CAPN9-201ENST00000271971 BMI1P35226 326 aa9.42□□□□□ -0.9
CAPN9-201ENST00000271971 FHL3Q13643 280 aa9.42□□□□□ -0.9
CAPN9-201ENST00000271971 NSUN5P1Q3KNT7 163 aa9.42□□□□□ -0.9
CAPN9-201ENST00000271971 PRR31Q5SQ13 230 aa9.42□□□□□ -0.9
CAPN9-201ENST00000271971 FER1L6-AS1Q8NA97 138 aa9.42□□□□□ -0.9
CAPN9-201ENST00000271971 GATD1Q8NB37 220 aa9.42□□□□□ -0.9
CAPN9-201ENST00000271971 DCANP1Q8TF63 244 aa9.42□□□□□ -0.9
CAPN9-201ENST00000271971 TRBV6-1A0A0K0K1D8 114 aa9.41□□□□□ -0.9
CAPN9-201ENST00000271971 SERTM2A0A1B0GWG4 89 aa9.41□□□□□ -0.9
CAPN9-201ENST00000271971 ADARB2-AS1A8MUL3 147 aa9.41□□□□□ -0.9
CAPN9-201ENST00000271971 G3V4G9 280 aa9.41□□□□□ -0.9
CAPN9-201ENST00000271971 H3BRM9 83 aa9.41□□□□□ -0.9
CAPN9-201ENST00000271971 C2orf91Q6ZV80 131 aa9.41□□□□□ -0.9
CAPN9-201ENST00000271971 SVIPQ8NHG7 77 aa9.41□□□□□ -0.9
CAPN9-201ENST00000271971 WFDC12Q8WWY7 111 aa9.41□□□□□ -0.9
CAPN9-201ENST00000271971 VWFP04275 2813 aa9.41□□□□□ -0.9
CAPN9-201ENST00000271971 AGRNO00468 2067 aa9.41□□□□□ -0.9
CAPN9-201ENST00000271971 NPIPB6E9PJ23 425 aa9.41□□□□□ -0.9
CAPN9-201ENST00000271971 F6UB75 175 aa9.41□□□□□ -0.9
CAPN9-201ENST00000271971 TMEM97Q5BJF2 176 aa9.41□□□□□ -0.9
CAPN9-201ENST00000271971 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.41□□□□□ -0.9
CAPN9-201ENST00000271971 GTSF1Q8WW33 167 aa9.41□□□□□ -0.9
CAPN9-201ENST00000271971 C7orf71A4D174 169 aa9.4□□□□□ -0.9
CAPN9-201ENST00000271971 GAGE10A6NGK3 116 aa9.4□□□□□ -0.9
CAPN9-201ENST00000271971 FOXA3P55318 350 aaPredicted RBP9.4□□□□□ -0.9
CAPN9-201ENST00000271971 MRPL53Q96EL3 112 aaKnown RBP9.4□□□□□ -0.9
CAPN9-201ENST00000271971 PEMTQ9UBM1 199 aa9.4□□□□□ -0.9
CAPN9-201ENST00000271971 C9orf118A6NHY6 69 aa9.39□□□□□ -0.91
CAPN9-201ENST00000271971 P01737 135 aa9.39□□□□□ -0.91
CAPN9-201ENST00000271971 CSN3P07498 182 aa9.39□□□□□ -0.91
CAPN9-201ENST00000271971 PRR25Q96S07 402 aa9.39□□□□□ -0.91
CAPN9-201ENST00000271971 AGPAT4-IT1Q9H0P7 198 aa9.39□□□□□ -0.91
CAPN9-201ENST00000271971 ZNF688P0C7X2 276 aa9.39□□□□□ -0.91
CAPN9-201ENST00000271971 CRIP1P50238 77 aa9.39□□□□□ -0.91
CAPN9-201ENST00000271971 SIVA1O15304 175 aa9.38□□□□□ -0.91
CAPN9-201ENST00000271971 MCRIP2Q9BUT9 160 aaKnown RBP9.38□□□□□ -0.91
CAPN9-201ENST00000271971 A0A1B0GW15 77 aa9.38□□□□□ -0.91
CAPN9-201ENST00000271971 RBAKDNA6NC62 111 aa9.38□□□□□ -0.91
CAPN9-201ENST00000271971 A6NDN8 102 aa9.38□□□□□ -0.91
CAPN9-201ENST00000271971 TMEM61Q8N0U2 210 aa9.38□□□□□ -0.91
CAPN9-201ENST00000271971 PGLYRP4Q96LB8 373 aa9.38□□□□□ -0.91
CAPN9-201ENST00000271971 ZNF747Q9BV97 191 aa9.38□□□□□ -0.91
CAPN9-201ENST00000271971 K7EP34 96 aa9.37□□□□□ -0.91
CAPN9-201ENST00000271971 FGF6P10767 208 aa9.37□□□□□ -0.91
CAPN9-201ENST00000271971 ZNF80P51504 273 aaPredicted RBP9.37□□□□□ -0.91
CAPN9-201ENST00000271971 PSMG4Q5JS54 123 aa9.37□□□□□ -0.91
CAPN9-201ENST00000271971 TMEM78Q5T7P6 136 aa9.37□□□□□ -0.91
CAPN9-201ENST00000271971 DYNLRB2Q8TF09 96 aa9.37□□□□□ -0.91
CAPN9-201ENST00000271971 DAZAP1Q96EP5 407 aaKnown RBP9.37□□□□□ -0.91
CAPN9-201ENST00000271971 K7EQG2 157 aa9.37□□□□□ -0.91
CAPN9-201ENST00000271971 NEGR1Q7Z3B1 354 aa9.37□□□□□ -0.91
CAPN9-201ENST00000271971 OVOL1O14753 267 aa9.36□□□□□ -0.91
CAPN9-201ENST00000271971 SMIM17P0DL12 118 aa9.36□□□□□ -0.91
CAPN9-201ENST00000271971 CT45A10P0DMU9 189 aa9.36□□□□□ -0.91
CAPN9-201ENST00000271971 ZNF138P52744 262 aa9.36□□□□□ -0.91
CAPN9-201ENST00000271971 C9orf47Q6ZRZ4 202 aa9.36□□□□□ -0.91
CAPN9-201ENST00000271971 J3KRW8 73 aa9.36□□□□□ -0.91
CAPN9-201ENST00000271971 ID1P41134 155 aa9.36□□□□□ -0.91
CAPN9-201ENST00000271971 HSD52Q0P140 79 aa9.36□□□□□ -0.91
CAPN9-201ENST00000271971 CD300EQ496F6 205 aaPredicted RBP9.36□□□□□ -0.91
CAPN9-201ENST00000271971 OR8A1Q8NGG7 326 aa9.36□□□□□ -0.91
CAPN9-201ENST00000271971 OR5A1Q8NGJ0 315 aa9.36□□□□□ -0.91
CAPN9-201ENST00000271971 OR10J6PQ8NGY7 276 aa9.36□□□□□ -0.91
CAPN9-201ENST00000271971 AP1S3Q96PC3 154 aa9.36□□□□□ -0.91
CAPN9-201ENST00000271971 FBLL1A6NHQ2 334 aaKnown RBP9.35□□□□□ -0.91
CAPN9-201ENST00000271971 SH2D1AO60880 128 aa9.35□□□□□ -0.91
CAPN9-201ENST00000271971 BOD1L2Q8IYS8 172 aa9.35□□□□□ -0.91
CAPN9-201ENST00000271971 OR10AG1Q8NH19 301 aa9.35□□□□□ -0.91
CAPN9-201ENST00000271971 AP5S1Q9NUS5 200 aa9.35□□□□□ -0.91
CAPN9-201ENST00000271971 RIGQ13278 110 aa9.35□□□□□ -0.91
CAPN9-201ENST00000271971 DEFB114Q30KQ6 69 aa9.35□□□□□ -0.91
CAPN9-201ENST00000271971 PRR9Q5T870 116 aa9.35□□□□□ -0.91
CAPN9-201ENST00000271971 Q6ZQT7 251 aa9.35□□□□□ -0.91
CAPN9-201ENST00000271971 TMSB15BA0A087X1C1 80 aa9.34□□□□□ -0.91
CAPN9-201ENST00000271971 SNRPD3P62318 126 aaKnown RBP9.34□□□□□ -0.91
CAPN9-201ENST00000271971 LGALS9BQ3B8N2 356 aa9.34□□□□□ -0.91
CAPN9-201ENST00000271971 LGALS9CQ6DKI2 356 aa9.34□□□□□ -0.91
CAPN9-201ENST00000271971 NDUFA11Q86Y39 141 aa9.34□□□□□ -0.91
CAPN9-201ENST00000271971 FBN1P35555 2871 aaKnown RBP9.34□□□□□ -0.91
CAPN9-201ENST00000271971 SNAI2O43623 268 aa9.34□□□□□ -0.91
CAPN9-201ENST00000271971 SAMD13Q5VXD3 122 aa9.34□□□□□ -0.91
CAPN9-201ENST00000271971 COX8CQ7Z4L0 72 aa9.34□□□□□ -0.91
CAPN9-201ENST00000271971 TRRAPQ9Y4A5 3859 aa9.33□□□□□ -0.92
CAPN9-201ENST00000271971 A0A1B0GUT8 65 aa9.33□□□□□ -0.92
CAPN9-201ENST00000271971 KIR3DS1Q14943 382 aa9.33□□□□□ -0.92
CAPN9-201ENST00000271971 OR2K2Q8NGT1 345 aa9.33□□□□□ -0.92
CAPN9-201ENST00000271971 NOTCH3Q9UM47 2321 aa9.33□□□□□ -0.92
CAPN9-201ENST00000271971 IGKV3-20P01619 116 aa9.32□□□□□ -0.92
CAPN9-201ENST00000271971 SCGB1A1P11684 91 aa9.32□□□□□ -0.92
CAPN9-201ENST00000271971 Q6AWC8 147 aa9.32□□□□□ -0.92
CAPN9-201ENST00000271971 FA2HQ7L5A8 372 aa9.32□□□□□ -0.92
CAPN9-201ENST00000271971 NAA38Q9BRA0 125 aaKnown RBP9.32□□□□□ -0.92
CAPN9-201ENST00000271971 H0Y8G0 127 aa9.31□□□□□ -0.92
CAPN9-201ENST00000271971 H3BUT2 72 aa9.31□□□□□ -0.92
CAPN9-201ENST00000271971 PF4P02776 101 aa9.31□□□□□ -0.92
CAPN9-201ENST00000271971 ZNF493Q6ZR52 646 aa9.31□□□□□ -0.92
CAPN9-201ENST00000271971 ZFAND2AQ8N6M9 145 aa9.31□□□□□ -0.92
CAPN9-201ENST00000271971 LINC00477Q96M19 166 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms