RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 IGHV4-38-2P0DP08 117 aa12.73□□□□□ -0.37
SQLE-201ENST00000265896 LMO4P61968 165 aa12.73□□□□□ -0.37
SQLE-201ENST00000265896 RPL39P62891 51 aaKnown RBP12.73□□□□□ -0.37
SQLE-201ENST00000265896 PHLDA1Q8WV24 401 aaPredicted RBP12.73□□□□□ -0.37
SQLE-201ENST00000265896 SMIM2Q9BVW6 85 aa12.73□□□□□ -0.37
SQLE-201ENST00000265896 CHTOPQ9Y3Y2 248 aaKnown RBP12.73□□□□□ -0.37
SQLE-201ENST00000265896 ATP5LO75964 103 aa12.73□□□□□ -0.37
SQLE-201ENST00000265896 C12orf74Q32Q52 190 aa12.73□□□□□ -0.37
SQLE-201ENST00000265896 EPG5Q9HCE0 2579 aa12.73□□□□□ -0.37
SQLE-201ENST00000265896 IGLL5B9A064 214 aa12.72□□□□□ -0.37
SQLE-201ENST00000265896 SUMO2P61956 95 aaKnown RBP12.72□□□□□ -0.37
SQLE-201ENST00000265896 FBXL19-AS1Q494R0 122 aa12.72□□□□□ -0.37
SQLE-201ENST00000265896 PLEKHB2Q96CS7 222 aa12.72□□□□□ -0.37
SQLE-201ENST00000265896 DUSP14O95147 198 aaKnown RBP12.72□□□□□ -0.37
SQLE-201ENST00000265896 HLA-DRB4P13762 266 aa12.72□□□□□ -0.37
SQLE-201ENST00000265896 SCGB1D4Q6XE38 83 aa12.72□□□□□ -0.37
SQLE-201ENST00000265896 ZFAND2AQ8N6M9 145 aa12.72□□□□□ -0.37
SQLE-201ENST00000265896 HLA-DRB4X5D2U9 266 aa12.72□□□□□ -0.37
SQLE-201ENST00000265896 TRAV12-2A0A075B6T6 113 aa12.72□□□□□ -0.37
SQLE-201ENST00000265896 HTN1P15515 57 aa12.72□□□□□ -0.37
SQLE-201ENST00000265896 HIST2H2BDQ6DRA6 164 aa12.72□□□□□ -0.37
SQLE-201ENST00000265896 C10orf99Q6UWK7 81 aa12.72□□□□□ -0.37
SQLE-201ENST00000265896 C2orf66Q6UXQ4 117 aa12.72□□□□□ -0.37
SQLE-201ENST00000265896 LINC00477Q96M19 166 aa12.72□□□□□ -0.37
SQLE-201ENST00000265896 IGHV3-64A0A075B6Q5 118 aa12.71□□□□□ -0.37
SQLE-201ENST00000265896 PRSS29PA6NIE9 313 aa12.71□□□□□ -0.37
SQLE-201ENST00000265896 OR11H12B2RN74 326 aa12.71□□□□□ -0.37
SQLE-201ENST00000265896 APOMO95445 188 aa12.71□□□□□ -0.37
SQLE-201ENST00000265896 OR11H1Q8NG94 326 aa12.71□□□□□ -0.37
SQLE-201ENST00000265896 OR11H2Q8NH07 326 aa12.71□□□□□ -0.37
SQLE-201ENST00000265896 TMEM238C9JI98 176 aa12.71□□□□□ -0.38
SQLE-201ENST00000265896 NBL1P41271 181 aa12.71□□□□□ -0.38
SQLE-201ENST00000265896 OR10J6PQ8NGY7 276 aa12.71□□□□□ -0.38
SQLE-201ENST00000265896 OPRPNQ99935 248 aaPredicted RBP12.71□□□□□ -0.38
SQLE-201ENST00000265896 SLC25A16P16260 332 aa12.7□□□□□ -0.38
SQLE-201ENST00000265896 TSSC4Q9Y5U2 329 aaPredicted RBP12.7□□□□□ -0.38
SQLE-201ENST00000265896 KLRB1Q12918 225 aa12.7□□□□□ -0.38
SQLE-201ENST00000265896 ARL6IP6Q8N6S5 226 aa12.7□□□□□ -0.38
SQLE-201ENST00000265896 PRADC1Q9BSG0 188 aa12.7□□□□□ -0.38
SQLE-201ENST00000265896 CCDC168Q8NDH2 2452 aa12.69□□□□□ -0.38
SQLE-201ENST00000265896 H3BUX3 64 aa12.69□□□□□ -0.38
SQLE-201ENST00000265896 C9orf47Q6ZRZ4 202 aa12.69□□□□□ -0.38
SQLE-201ENST00000265896 TRAV12-3A0A0B4J271 114 aa12.69□□□□□ -0.38
SQLE-201ENST00000265896 LOC107984156A0A0G2JMH3 177 aa12.69□□□□□ -0.38
SQLE-201ENST00000265896 ARL17AQ8IVW1 177 aa12.69□□□□□ -0.38
SQLE-201ENST00000265896 DUX5Q96PT3 197 aa12.69□□□□□ -0.38
SQLE-201ENST00000265896 ZNF256Q9Y2P7 627 aaPredicted RBP12.69□□□□□ -0.38
SQLE-201ENST00000265896 JMJD1CQ15652 2540 aa12.69□□□□□ -0.38
SQLE-201ENST00000265896 ZNF815PA8K554 130 aa12.69□□□□□ -0.38
SQLE-201ENST00000265896 ASIPP42127 132 aa12.69□□□□□ -0.38
SQLE-201ENST00000265896 OR5A1Q8NGJ0 315 aa12.69□□□□□ -0.38
SQLE-201ENST00000265896 TRBV7-1A0A0A6YYK4 115 aa12.68□□□□□ -0.38
SQLE-201ENST00000265896 RBAKDNA6NC62 111 aa12.68□□□□□ -0.38
SQLE-201ENST00000265896 OOSP1A8MZH6 123 aa12.68□□□□□ -0.38
SQLE-201ENST00000265896 F8VRH5 84 aa12.68□□□□□ -0.38
SQLE-201ENST00000265896 SRSF9Q13242 221 aaKnown RBP eCLIP12.68□□□□□ -0.38
SQLE-201ENST00000265896 C1orf122Q6ZSJ8 110 aa12.68□□□□□ -0.38
SQLE-201ENST00000265896 NRGNQ92686 78 aa12.68□□□□□ -0.38
SQLE-201ENST00000265896 PIEZO1Q92508 2521 aa12.68□□□□□ -0.38
SQLE-201ENST00000265896 IGHV4-61A0A0C4DH41 118 aa12.68□□□□□ -0.38
SQLE-201ENST00000265896 H7C1H1 209 aa12.68□□□□□ -0.38
SQLE-201ENST00000265896 PIFOQ8TCI5 191 aa12.68□□□□□ -0.38
SQLE-201ENST00000265896 BAALCQ8WXS3 180 aa12.68□□□□□ -0.38
SQLE-201ENST00000265896 RHPN1-AS1Q9BWJ2 59 aa12.68□□□□□ -0.38
SQLE-201ENST00000265896 PRM2P04554 102 aa12.67□□□□□ -0.38
SQLE-201ENST00000265896 MAPK1IP1LQ8NDC0 245 aa12.67□□□□□ -0.38
SQLE-201ENST00000265896 ZNF418Q8TF45 676 aaPredicted RBP12.67□□□□□ -0.38
SQLE-201ENST00000265896 PGPEP1Q9NXJ5 209 aa12.67□□□□□ -0.38
SQLE-201ENST00000265896 TEX15Q9BXT5 2789 aa12.67□□□□□ -0.38
SQLE-201ENST00000265896 PTH2Q96A98 100 aa12.67□□□□□ -0.38
SQLE-201ENST00000265896 RAB9AP51151 201 aa12.66□□□□□ -0.38
SQLE-201ENST00000265896 TM2D2Q9BX73 214 aa12.66□□□□□ -0.38
SQLE-201ENST00000265896 NAV2Q8IVL1 2488 aa12.66□□□□□ -0.38
SQLE-201ENST00000265896 MYMXA0A1B0GTQ4 84 aa12.66□□□□□ -0.38
SQLE-201ENST00000265896 IGHV4-39P01824 125 aa12.66□□□□□ -0.38
SQLE-201ENST00000265896 LGALS1P09382 135 aaKnown RBP12.66□□□□□ -0.38
SQLE-201ENST00000265896 ZFP2Q6ZN57 461 aa12.66□□□□□ -0.38
SQLE-201ENST00000265896 CHD6Q8TD26 2715 aa12.66□□□□□ -0.38
SQLE-201ENST00000265896 IGSF10Q6WRI0 2623 aa12.66□□□□□ -0.38
SQLE-201ENST00000265896 ZNF688P0C7X2 276 aa12.66□□□□□ -0.38
SQLE-201ENST00000265896 RNASE3P12724 160 aaKnown RBP12.66□□□□□ -0.38
SQLE-201ENST00000265896 AZU1P20160 251 aa12.66□□□□□ -0.38
SQLE-201ENST00000265896 MRPL16Q9NX20 251 aaKnown RBP12.66□□□□□ -0.38
SQLE-201ENST00000265896 HIGD1BQ9P298 99 aa12.66□□□□□ -0.38
SQLE-201ENST00000265896 TP53TG1Q9Y2A0 90 aa12.66□□□□□ -0.38
SQLE-201ENST00000265896 TRAV21A0A0B4J279 112 aa12.65□□□□□ -0.38
SQLE-201ENST00000265896 LINC01549A6NIU2 74 aa12.65□□□□□ -0.38
SQLE-201ENST00000265896 H7C2G1 150 aa12.65□□□□□ -0.38
SQLE-201ENST00000265896 FOXI2Q6ZQN5 318 aa12.65□□□□□ -0.38
SQLE-201ENST00000265896 E9PLD3 99 aa12.65□□□□□ -0.38
SQLE-201ENST00000265896 CD7P09564 240 aa12.65□□□□□ -0.38
SQLE-201ENST00000265896 ITLN2Q8WWU7 325 aaPredicted RBP12.65□□□□□ -0.38
SQLE-201ENST00000265896 DPH3P1Q9H4G8 78 aa12.65□□□□□ -0.38
SQLE-201ENST00000265896 KLK9Q9UKQ9 250 aa12.65□□□□□ -0.38
SQLE-201ENST00000265896 MOB4Q9Y3A3 225 aa12.65□□□□□ -0.38
SQLE-201ENST00000265896 ANKRD17O75179 2603 aaKnown RBP12.64□□□□□ -0.39
SQLE-201ENST00000265896 IGHV3-73A0A0B4J1V6 119 aa12.64□□□□□ -0.39
SQLE-201ENST00000265896 LINC01546A6NGU7 62 aa12.64□□□□□ -0.39
SQLE-201ENST00000265896 RNF223E7ERA6 249 aa12.64□□□□□ -0.39
SQLE-201ENST00000265896 PLNP26678 52 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms