RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 APOC4P55056 127 aa10.88□□□□□ -0.67
CDH3-201ENST00000264012 GTSF1LQ9H1H1 148 aa10.88□□□□□ -0.67
CDH3-201ENST00000264012 SPRY2O43597 315 aa10.87□□□□□ -0.67
CDH3-201ENST00000264012 P0C879 139 aa10.87□□□□□ -0.67
CDH3-201ENST00000264012 GAGE2BQ13066 116 aa10.87□□□□□ -0.67
CDH3-201ENST00000264012 GAGE2EQ4V326 116 aa10.87□□□□□ -0.67
CDH3-201ENST00000264012 GAGE2DQ9UEU5 116 aa10.87□□□□□ -0.67
CDH3-201ENST00000264012 ZFAND6Q6FIF0 208 aa10.87□□□□□ -0.67
CDH3-201ENST00000264012 C16orf54Q6UWD8 224 aa10.87□□□□□ -0.67
CDH3-201ENST00000264012 ADAMTSL5Q6ZMM2 481 aa10.87□□□□□ -0.67
CDH3-201ENST00000264012 TRAV8-4A0A0B4J246 113 aa10.87□□□□□ -0.67
CDH3-201ENST00000264012 WI2-2373I1.2A0A1W2PRP0 233 aa10.87□□□□□ -0.67
CDH3-201ENST00000264012 IGF2BP2-AS1Q96M15 143 aa10.87□□□□□ -0.67
CDH3-201ENST00000264012 SPAG8Q99932 426 aaPredicted RBP10.86□□□□□ -0.67
CDH3-201ENST00000264012 VWC2LB2RUY7 222 aa10.86□□□□□ -0.67
CDH3-201ENST00000264012 GAGE6Q13070 117 aa10.86□□□□□ -0.67
CDH3-201ENST00000264012 KLF5Q13887 457 aaPredicted RBP10.86□□□□□ -0.67
CDH3-201ENST00000264012 MUC22E2RYF6 1773 aaPredicted RBP10.86□□□□□ -0.67
CDH3-201ENST00000264012 LINC00574Q9H8X3 128 aa10.86□□□□□ -0.67
CDH3-201ENST00000264012 UTF1Q5T230 341 aa10.86□□□□□ -0.67
CDH3-201ENST00000264012 ZNF493Q6ZR52 646 aa10.86□□□□□ -0.67
CDH3-201ENST00000264012 K7EP13 123 aa10.85□□□□□ -0.67
CDH3-201ENST00000264012 BRWD1-AS2P59051 145 aa10.85□□□□□ -0.67
CDH3-201ENST00000264012 BVES-AS1Q5T3Y7 98 aa10.85□□□□□ -0.67
CDH3-201ENST00000264012 ZNF747Q9BV97 191 aa10.85□□□□□ -0.67
CDH3-201ENST00000264012 GATA1P15976 413 aaPredicted RBP10.85□□□□□ -0.67
CDH3-201ENST00000264012 C2orf82Q6UX34 121 aa10.85□□□□□ -0.67
CDH3-201ENST00000264012 K7EP34 96 aa10.84□□□□□ -0.67
CDH3-201ENST00000264012 APRG1Q8IVJ8 170 aa10.84□□□□□ -0.67
CDH3-201ENST00000264012 DKK2Q9UBU2 259 aa10.84□□□□□ -0.67
CDH3-201ENST00000264012 SIVA1O15304 175 aa10.84□□□□□ -0.67
CDH3-201ENST00000264012 U3KQE9 123 aa10.84□□□□□ -0.67
CDH3-201ENST00000264012 IGHG2P01859 326 aa10.84□□□□□ -0.67
CDH3-201ENST00000264012 FANCD2OSQ96PS1 177 aa10.84□□□□□ -0.67
CDH3-201ENST00000264012 PRAC2D3DTV9 90 aa10.83□□□□□ -0.68
CDH3-201ENST00000264012 MSRB1Q9NZV6 116 aa10.83□□□□□ -0.68
CDH3-201ENST00000264012 CHD3Q12873 2000 aaKnown RBP10.83□□□□□ -0.68
CDH3-201ENST00000264012 NOP10Q9NPE3 64 aaKnown RBP10.83□□□□□ -0.68
CDH3-201ENST00000264012 NDUFA12Q9UI09 145 aa10.83□□□□□ -0.68
CDH3-201ENST00000264012 HIVEP3Q5T1R4 2406 aa10.83□□□□□ -0.68
CDH3-201ENST00000264012 KLF12Q9Y4X4 402 aa10.83□□□□□ -0.68
CDH3-201ENST00000264012 TRAV8-3A0A0A6YYJ7 113 aa10.83□□□□□ -0.68
CDH3-201ENST00000264012 LMO4P61968 165 aa10.83□□□□□ -0.68
CDH3-201ENST00000264012 NAV3Q8IVL0 2385 aa10.82□□□□□ -0.68
CDH3-201ENST00000264012 IGHV4OR15-8A0A075B7B6 117 aa10.82□□□□□ -0.68
CDH3-201ENST00000264012 A0A087WW49 117 aa10.82□□□□□ -0.68
CDH3-201ENST00000264012 F8W1H4 67 aa10.82□□□□□ -0.68
CDH3-201ENST00000264012 PFN2P35080 140 aa10.82□□□□□ -0.68
CDH3-201ENST00000264012 PRORYQ9H606 182 aa10.81□□□□□ -0.68
CDH3-201ENST00000264012 RNASE13Q5GAN3 156 aaKnown RBP10.81□□□□□ -0.68
CDH3-201ENST00000264012 MYO9AB2RTY4 2548 aa10.81□□□□□ -0.68
CDH3-201ENST00000264012 ARHGAP21Q5T5U3 1957 aa10.81□□□□□ -0.68
CDH3-201ENST00000264012 PRSS29PA6NIE9 313 aa10.81□□□□□ -0.68
CDH3-201ENST00000264012 MAJINQ3KP22 176 aa10.81□□□□□ -0.68
CDH3-201ENST00000264012 DEFB125Q8N687 156 aa10.81□□□□□ -0.68
CDH3-201ENST00000264012 SPANXA1Q9NS26 97 aa10.81□□□□□ -0.68
CDH3-201ENST00000264012 A0A096LPF7 62 aa10.81□□□□□ -0.68
CDH3-201ENST00000264012 C9JAW5 83 aa10.81□□□□□ -0.68
CDH3-201ENST00000264012 C19orf84I3L1E1 186 aa10.81□□□□□ -0.68
CDH3-201ENST00000264012 GTSF1Q8WW33 167 aa10.81□□□□□ -0.68
CDH3-201ENST00000264012 K7EMI3 77 aa10.8□□□□□ -0.68
CDH3-201ENST00000264012 K7EMT4 169 aa10.8□□□□□ -0.68
CDH3-201ENST00000264012 NUPR1O60356 82 aa10.8□□□□□ -0.68
CDH3-201ENST00000264012 LAMTOR3Q9UHA4 124 aa10.8□□□□□ -0.68
CDH3-201ENST00000264012 ABCA2Q9BZC7 2435 aa10.8□□□□□ -0.68
CDH3-201ENST00000264012 IGKV1D-37A0A075B6S9 117 aa10.8□□□□□ -0.68
CDH3-201ENST00000264012 J3QQQ9 107 aa10.8□□□□□ -0.68
CDH3-201ENST00000264012 RHOHQ15669 191 aa10.8□□□□□ -0.68
CDH3-201ENST00000264012 ZNF561-AS1K7EIQ3 104 aa10.8□□□□□ -0.68
CDH3-201ENST00000264012 TAL2Q16559 108 aa10.8□□□□□ -0.68
CDH3-201ENST00000264012 ALPK3Q96L96 1907 aa10.8□□□□□ -0.68
CDH3-201ENST00000264012 C2orf70A6NJV1 201 aa10.8□□□□□ -0.68
CDH3-201ENST00000264012 SPINK8P0C7L1 97 aa10.8□□□□□ -0.68
CDH3-201ENST00000264012 C1orf229Q6ZS94 237 aaPredicted RBP10.8□□□□□ -0.68
CDH3-201ENST00000264012 ZNF48Q96MX3 618 aaPredicted RBP10.8□□□□□ -0.68
CDH3-201ENST00000264012 OVOL2Q9BRP0 275 aa10.8□□□□□ -0.68
CDH3-201ENST00000264012 A0A1W2PPM0 123 aa10.79□□□□□ -0.68
CDH3-201ENST00000264012 ODF3BA8MYP8 253 aa10.79□□□□□ -0.68
CDH3-201ENST00000264012 GPHB5Q86YW7 130 aa10.79□□□□□ -0.68
CDH3-201ENST00000264012 TRBV20-1A0A075B6N2 111 aa10.79□□□□□ -0.68
CDH3-201ENST00000264012 RPL39LQ96EH5 51 aaKnown RBP10.79□□□□□ -0.68
CDH3-201ENST00000264012 C9orf47Q6ZRZ4 202 aa10.79□□□□□ -0.68
CDH3-201ENST00000264012 ZNF295-AS1Q8N0V1 137 aa10.79□□□□□ -0.68
CDH3-201ENST00000264012 ZMAT4Q9H898 229 aa10.79□□□□□ -0.68
CDH3-201ENST00000264012 HERVK_113P63121 156 aa10.78□□□□□ -0.68
CDH3-201ENST00000264012 A6NDX4 124 aa10.78□□□□□ -0.68
CDH3-201ENST00000264012 NACAE9PAV3 2078 aa10.78□□□□□ -0.68
CDH3-201ENST00000264012 CCL25O15444 150 aa10.78□□□□□ -0.68
CDH3-201ENST00000264012 UNQ9165/PRO28630Q6UXU0 137 aa10.78□□□□□ -0.68
CDH3-201ENST00000264012 ZNF503Q96F45 646 aa10.78□□□□□ -0.68
CDH3-201ENST00000264012 TMEM89A2RUT3 159 aa10.77□□□□□ -0.69
CDH3-201ENST00000264012 SUMO4Q6EEV6 95 aa10.77□□□□□ -0.69
CDH3-201ENST00000264012 RNF152Q8N8N0 203 aa10.77□□□□□ -0.69
CDH3-201ENST00000264012 GOLGB1Q14789 3259 aaKnown RBP10.77□□□□□ -0.69
CDH3-201ENST00000264012 TRBV12-3P01733 135 aa10.77□□□□□ -0.69
CDH3-201ENST00000264012 DEFB1P60022 68 aa10.77□□□□□ -0.69
CDH3-201ENST00000264012 ANGP03950 147 aaKnown RBP10.77□□□□□ -0.69
CDH3-201ENST00000264012 CEP192Q8TEP8 1941 aa10.77□□□□□ -0.69
CDH3-201ENST00000264012 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.76□□□□□ -0.69
CDH3-201ENST00000264012 IGKV2-29A2NJV5 120 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms