RNA–Protein interactions for RNA: ENST00000263932.6

TNFRSF8-201, Transcript of TNF receptor superfamily member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,686 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-201ENST00000263932 CHCHD1Q96BP2 118 aaKnown RBP10.29□□□□□ -0.76
TNFRSF8-201ENST00000263932 IGHV3-73A0A0B4J1V6 119 aa10.28□□□□□ -0.76
TNFRSF8-201ENST00000263932 OR2K2Q8NGT1 345 aa10.28□□□□□ -0.76
TNFRSF8-201ENST00000263932 A0A087WWL8 130 aa10.28□□□□□ -0.76
TNFRSF8-201ENST00000263932 MRPS12O15235 138 aaKnown RBP10.28□□□□□ -0.76
TNFRSF8-201ENST00000263932 MYOZ3Q8TDC0 251 aa10.28□□□□□ -0.76
TNFRSF8-201ENST00000263932 GATA3P23771 443 aa10.28□□□□□ -0.76
TNFRSF8-201ENST00000263932 SLC50A1Q9BRV3 221 aa10.28□□□□□ -0.76
TNFRSF8-201ENST00000263932 ZNF256Q9Y2P7 627 aaPredicted RBP10.28□□□□□ -0.76
TNFRSF8-201ENST00000263932 TRAV12-2A0A075B6T6 113 aa10.27□□□□□ -0.76
TNFRSF8-201ENST00000263932 PET117Q6UWS5 81 aa10.27□□□□□ -0.76
TNFRSF8-201ENST00000263932 USMG5Q96IX5 58 aa10.27□□□□□ -0.76
TNFRSF8-201ENST00000263932 ST20Q9HBF5 79 aa10.27□□□□□ -0.76
TNFRSF8-201ENST00000263932 DAZ1Q9NQZ3 744 aaKnown RBP10.27□□□□□ -0.76
TNFRSF8-201ENST00000263932 VPREB3Q9UKI3 123 aa10.27□□□□□ -0.77
TNFRSF8-201ENST00000263932 GAGE12BA1L429 117 aa10.27□□□□□ -0.77
TNFRSF8-201ENST00000263932 TNFRSF6BO95407 300 aa10.27□□□□□ -0.77
TNFRSF8-201ENST00000263932 ZNF48Q96MX3 618 aaPredicted RBP10.27□□□□□ -0.77
TNFRSF8-201ENST00000263932 AMTNQ6UX39 209 aa10.26□□□□□ -0.77
TNFRSF8-201ENST00000263932 HIST1H4GQ99525 98 aa10.26□□□□□ -0.77
TNFRSF8-201ENST00000263932 SMR3AQ99954 134 aa10.26□□□□□ -0.77
TNFRSF8-201ENST00000263932 SLURP1P55000 103 aa10.26□□□□□ -0.77
TNFRSF8-201ENST00000263932 C20orf173Q96LM9 149 aa10.26□□□□□ -0.77
TNFRSF8-201ENST00000263932 IGHV3OR16-12A0A075B7B8 117 aa10.26□□□□□ -0.77
TNFRSF8-201ENST00000263932 ZNF492Q9P255 531 aa10.26□□□□□ -0.77
TNFRSF8-201ENST00000263932 TRAV12-3A0A0B4J271 114 aa10.25□□□□□ -0.77
TNFRSF8-201ENST00000263932 LOC107984156A0A0G2JMH3 177 aa10.25□□□□□ -0.77
TNFRSF8-201ENST00000263932 ARL17AQ8IVW1 177 aa10.25□□□□□ -0.77
TNFRSF8-201ENST00000263932 MRPS16Q9Y3D3 137 aaKnown RBP10.25□□□□□ -0.77
TNFRSF8-201ENST00000263932 GNRH2O43555 120 aa10.25□□□□□ -0.77
TNFRSF8-201ENST00000263932 SRSF9Q13242 221 aaKnown RBP eCLIP10.25□□□□□ -0.77
TNFRSF8-201ENST00000263932 CD300EQ496F6 205 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF8-201ENST00000263932 RASL11AQ6T310 242 aa10.25□□□□□ -0.77
TNFRSF8-201ENST00000263932 KLHL30-AS1Q8NEE0 82 aa10.25□□□□□ -0.77
TNFRSF8-201ENST00000263932 SPCS1Q9Y6A9 102 aa10.25□□□□□ -0.77
TNFRSF8-201ENST00000263932 NDUFA4O00483 81 aa10.25□□□□□ -0.77
TNFRSF8-201ENST00000263932 APOMO95445 188 aa10.25□□□□□ -0.77
TNFRSF8-201ENST00000263932 SMIM17P0DL12 118 aa10.25□□□□□ -0.77
TNFRSF8-201ENST00000263932 KLF5Q13887 457 aaPredicted RBP10.25□□□□□ -0.77
TNFRSF8-201ENST00000263932 IGHV4OR15-8A0A075B7B6 117 aa10.24□□□□□ -0.77
TNFRSF8-201ENST00000263932 A0A087WW49 117 aa10.24□□□□□ -0.77
TNFRSF8-201ENST00000263932 TAX1BP3O14907 124 aa10.24□□□□□ -0.77
TNFRSF8-201ENST00000263932 DYNLRB2Q8TF09 96 aa10.24□□□□□ -0.77
TNFRSF8-201ENST00000263932 CYSLTR1Q9Y271 337 aa10.24□□□□□ -0.77
TNFRSF8-201ENST00000263932 OR11H1Q8NG94 326 aa10.23□□□□□ -0.77
TNFRSF8-201ENST00000263932 A6NDN8 102 aa10.23□□□□□ -0.77
TNFRSF8-201ENST00000263932 RPL39LQ96EH5 51 aaKnown RBP10.23□□□□□ -0.77
TNFRSF8-201ENST00000263932 JPT2Q9H910 190 aa10.23□□□□□ -0.77
TNFRSF8-201ENST00000263932 MRPL35Q9NZE8 188 aaKnown RBP10.23□□□□□ -0.77
TNFRSF8-201ENST00000263932 ATRQ13535 2644 aa10.23□□□□□ -0.77
TNFRSF8-201ENST00000263932 TRAV8-2A0A0B4J237 113 aa10.23□□□□□ -0.77
TNFRSF8-201ENST00000263932 IGHV7-4-1A0A0J9YVY3 117 aa10.23□□□□□ -0.77
TNFRSF8-201ENST00000263932 IGHG4P01861 327 aa10.23□□□□□ -0.77
TNFRSF8-201ENST00000263932 ORAOV1Q8WV07 137 aa10.23□□□□□ -0.77
TNFRSF8-201ENST00000263932 NBPF19A0A087WUL8 3843 aa10.23□□□□□ -0.77
TNFRSF8-201ENST00000263932 HOXD3P31249 432 aaPredicted RBP10.22□□□□□ -0.77
TNFRSF8-201ENST00000263932 CST9LQ9H4G1 147 aa10.22□□□□□ -0.77
TNFRSF8-201ENST00000263932 IGKV2D-26A0A0A0MRZ7 120 aa10.22□□□□□ -0.77
TNFRSF8-201ENST00000263932 K7ERU9 68 aa10.22□□□□□ -0.77
TNFRSF8-201ENST00000263932 SCGB3A1Q96QR1 104 aa10.22□□□□□ -0.77
TNFRSF8-201ENST00000263932 IGKV3D-20A0A0C4DH25 116 aa10.22□□□□□ -0.77
TNFRSF8-201ENST00000263932 ID1P41134 155 aa10.22□□□□□ -0.77
TNFRSF8-201ENST00000263932 OCIAD2Q56VL3 154 aa10.22□□□□□ -0.77
TNFRSF8-201ENST00000263932 TMEM190Q8WZ59 177 aa10.22□□□□□ -0.77
TNFRSF8-201ENST00000263932 SETXQ7Z333 2677 aaKnown RBP10.21□□□□□ -0.77
TNFRSF8-201ENST00000263932 SPINK13Q1W4C9 94 aa10.21□□□□□ -0.77
TNFRSF8-201ENST00000263932 C9orf139Q6ZV77 190 aa10.21□□□□□ -0.77
TNFRSF8-201ENST00000263932 SMPXQ9UHP9 88 aa10.21□□□□□ -0.77
TNFRSF8-201ENST00000263932 KLK9Q9UKQ9 250 aa10.21□□□□□ -0.77
TNFRSF8-201ENST00000263932 F8P00451 2351 aa10.21□□□□□ -0.77
TNFRSF8-201ENST00000263932 PPBPP02775 128 aa10.21□□□□□ -0.78
TNFRSF8-201ENST00000263932 CD7P09564 240 aa10.21□□□□□ -0.78
TNFRSF8-201ENST00000263932 C11orf21Q9P2W6 132 aa10.21□□□□□ -0.78
TNFRSF8-201ENST00000263932 KNCNA6PVL3 124 aa10.2□□□□□ -0.78
TNFRSF8-201ENST00000263932 J3QLI3 93 aa10.2□□□□□ -0.78
TNFRSF8-201ENST00000263932 TCTEX1D4Q5JR98 221 aa10.2□□□□□ -0.78
TNFRSF8-201ENST00000263932 TMEM170BQ5T4T1 132 aa10.2□□□□□ -0.78
TNFRSF8-201ENST00000263932 SMIM12Q96EX1 92 aa10.2□□□□□ -0.78
TNFRSF8-201ENST00000263932 SCRT2Q9NQ03 307 aa10.2□□□□□ -0.78
TNFRSF8-201ENST00000263932 PRM2P04554 102 aa10.2□□□□□ -0.78
TNFRSF8-201ENST00000263932 COX8AP10176 69 aa10.2□□□□□ -0.78
TNFRSF8-201ENST00000263932 SNRPD3P62318 126 aaKnown RBP10.2□□□□□ -0.78
TNFRSF8-201ENST00000263932 NSUN5P1Q3KNT7 163 aa10.2□□□□□ -0.78
TNFRSF8-201ENST00000263932 PRR9Q5T870 116 aa10.2□□□□□ -0.78
TNFRSF8-201ENST00000263932 FAM159AQ6UWV7 190 aa10.2□□□□□ -0.78
TNFRSF8-201ENST00000263932 ZNF418Q8TF45 676 aaPredicted RBP10.2□□□□□ -0.78
TNFRSF8-201ENST00000263932 GFRA4Q9GZZ7 299 aa10.2□□□□□ -0.78
TNFRSF8-201ENST00000263932 FABP2P12104 132 aa10.19□□□□□ -0.78
TNFRSF8-201ENST00000263932 PLA2G2AP14555 144 aa10.19□□□□□ -0.78
TNFRSF8-201ENST00000263932 NPC2P61916 151 aa10.19□□□□□ -0.78
TNFRSF8-201ENST00000263932 CT83Q5H943 113 aa10.19□□□□□ -0.78
TNFRSF8-201ENST00000263932 A0A0U1RRA0 63 aa10.19□□□□□ -0.78
TNFRSF8-201ENST00000263932 FXYD2P54710 66 aa10.19□□□□□ -0.78
TNFRSF8-201ENST00000263932 ANXA2RQ3ZCQ2 193 aa10.19□□□□□ -0.78
TNFRSF8-201ENST00000263932 GTF2H5Q6ZYL4 71 aa10.19□□□□□ -0.78
TNFRSF8-201ENST00000263932 IGKCP01834 107 aa10.19□□□□□ -0.78
TNFRSF8-201ENST00000263932 ZNF56Q15929 161 aa10.19□□□□□ -0.78
TNFRSF8-201ENST00000263932 RNASE13Q5GAN3 156 aaKnown RBP10.19□□□□□ -0.78
TNFRSF8-201ENST00000263932 MS4A6AQ9H2W1 248 aa10.19□□□□□ -0.78
TNFRSF8-201ENST00000263932 Q6YL49 198 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms