RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 NHLRC2Q8NBF2 726 aa10.93□□□□□ -0.66
USE1-201ENST00000263897 MBD3L1Q8WWY6 194 aa10.93□□□□□ -0.66
USE1-201ENST00000263897 TNFRSF18Q9Y5U5 241 aa10.93□□□□□ -0.66
USE1-201ENST00000263897 DYNC1H1Q14204 4646 aaKnown RBP10.93□□□□□ -0.66
USE1-201ENST00000263897 IGHV3-73A0A0B4J1V6 119 aa10.92□□□□□ -0.66
USE1-201ENST00000263897 UMAD1C9J7I0 102 aa10.92□□□□□ -0.66
USE1-201ENST00000263897 S100A4P26447 101 aaKnown RBP10.92□□□□□ -0.66
USE1-201ENST00000263897 TIRAPP58753 221 aa10.92□□□□□ -0.66
USE1-201ENST00000263897 PIK3CD-AS1Q5SR53 167 aa10.92□□□□□ -0.66
USE1-201ENST00000263897 CST9LP1Q5W188 147 aa10.92□□□□□ -0.66
USE1-201ENST00000263897 ZC2HC1AQ96GY0 325 aa10.92□□□□□ -0.66
USE1-201ENST00000263897 FMC1Q96HJ9 113 aa10.92□□□□□ -0.66
USE1-201ENST00000263897 TCEAL7Q9BRU2 100 aa10.92□□□□□ -0.66
USE1-201ENST00000263897 PRADC1Q9BSG0 188 aa10.92□□□□□ -0.66
USE1-201ENST00000263897 TRBV6-1A0A0K0K1D8 114 aa10.91□□□□□ -0.66
USE1-201ENST00000263897 B4DEV8 164 aa10.91□□□□□ -0.66
USE1-201ENST00000263897 DNAH10OSP0CZ25 163 aa10.91□□□□□ -0.66
USE1-201ENST00000263897 EVI2AP22794 236 aa10.91□□□□□ -0.66
USE1-201ENST00000263897 ASIPP42127 132 aa10.91□□□□□ -0.66
USE1-201ENST00000263897 UBE2G1P62253 170 aa10.91□□□□□ -0.66
USE1-201ENST00000263897 NFE4Q86UQ8 179 aa10.91□□□□□ -0.66
USE1-201ENST00000263897 SFT2D1Q8WV19 159 aa10.91□□□□□ -0.66
USE1-201ENST00000263897 ZNF471Q9BX82 626 aaPredicted RBP10.91□□□□□ -0.66
USE1-201ENST00000263897 KANTRA0A1W2PQU2 76 aa10.9□□□□□ -0.66
USE1-201ENST00000263897 KRBOX1C9JBD0 128 aa10.9□□□□□ -0.66
USE1-201ENST00000263897 BCL2L11O43521 198 aa10.9□□□□□ -0.66
USE1-201ENST00000263897 PAGE4O60829 102 aa10.9□□□□□ -0.66
USE1-201ENST00000263897 MGST1P10620 155 aaKnown RBP10.9□□□□□ -0.66
USE1-201ENST00000263897 KRTAP10-2P60368 255 aa10.9□□□□□ -0.66
USE1-201ENST00000263897 RHOHQ15669 191 aa10.9□□□□□ -0.66
USE1-201ENST00000263897 DNLZQ5SXM8 178 aa10.9□□□□□ -0.66
USE1-201ENST00000263897 FAM213BQ8TBF2 198 aa10.9□□□□□ -0.66
USE1-201ENST00000263897 IL36BQ9NZH7 164 aa10.9□□□□□ -0.66
USE1-201ENST00000263897 A8MWV9 139 aa10.89□□□□□ -0.67
USE1-201ENST00000263897 SH2D1AO60880 128 aa10.89□□□□□ -0.67
USE1-201ENST00000263897 CDK2AP2O75956 126 aa10.89□□□□□ -0.67
USE1-201ENST00000263897 LGALSLQ3ZCW2 172 aaPredicted RBP10.89□□□□□ -0.67
USE1-201ENST00000263897 FAM162BQ5T6X4 162 aa10.89□□□□□ -0.67
USE1-201ENST00000263897 ZFP2Q6ZN57 461 aa10.89□□□□□ -0.67
USE1-201ENST00000263897 Q6ZSN1 163 aa10.89□□□□□ -0.67
USE1-201ENST00000263897 PARLQ9H300 379 aa10.89□□□□□ -0.67
USE1-201ENST00000263897 MSRB1Q9NZV6 116 aa10.89□□□□□ -0.67
USE1-201ENST00000263897 M0R036 132 aa10.88□□□□□ -0.67
USE1-201ENST00000263897 LTAP01374 205 aa10.88□□□□□ -0.67
USE1-201ENST00000263897 EIF5AP63241 154 aaKnown RBP10.88□□□□□ -0.67
USE1-201ENST00000263897 ZNF674Q2M3X9 581 aa10.88□□□□□ -0.67
USE1-201ENST00000263897 TMUB2Q71RG4 321 aa10.88□□□□□ -0.67
USE1-201ENST00000263897 IGHV3-38A0A0C4DH36 116 aa10.87□□□□□ -0.67
USE1-201ENST00000263897 GRIFINA4D1Z8 144 aa10.87□□□□□ -0.67
USE1-201ENST00000263897 CRYGDP07320 174 aa10.87□□□□□ -0.67
USE1-201ENST00000263897 H2AFB1P0C5Y9 115 aa10.87□□□□□ -0.67
USE1-201ENST00000263897 ARMS2P0C7Q2 107 aa10.87□□□□□ -0.67
USE1-201ENST00000263897 AKR1C3P42330 323 aa10.87□□□□□ -0.67
USE1-201ENST00000263897 DMRTA1Q5VZB9 504 aa10.87□□□□□ -0.67
USE1-201ENST00000263897 C10orf126Q8N4M7 172 aa10.87□□□□□ -0.67
USE1-201ENST00000263897 ATP6V0E2Q8NHE4 81 aa10.87□□□□□ -0.67
USE1-201ENST00000263897 JPT2Q9H910 190 aa10.87□□□□□ -0.67
USE1-201ENST00000263897 BOLA1Q9Y3E2 137 aa10.87□□□□□ -0.67
USE1-201ENST00000263897 TRAV8-6A0A0B4J262 113 aa10.86□□□□□ -0.67
USE1-201ENST00000263897 A0A1B0GV50 99 aa10.86□□□□□ -0.67
USE1-201ENST00000263897 H3BVH4 76 aa10.86□□□□□ -0.67
USE1-201ENST00000263897 S100A9P06702 114 aaKnown RBP10.86□□□□□ -0.67
USE1-201ENST00000263897 UFSP1Q6NVU6 142 aa10.86□□□□□ -0.67
USE1-201ENST00000263897 GTSF1LQ9H1H1 148 aa10.86□□□□□ -0.67
USE1-201ENST00000263897 EREGO14944 169 aa10.85□□□□□ -0.67
USE1-201ENST00000263897 PFDN1O60925 122 aa10.85□□□□□ -0.67
USE1-201ENST00000263897 TPT1P13693 172 aaKnown RBP10.85□□□□□ -0.67
USE1-201ENST00000263897 ERVFC1-1P60608 527 aa10.85□□□□□ -0.67
USE1-201ENST00000263897 LINC01559Q495D7 138 aa10.85□□□□□ -0.67
USE1-201ENST00000263897 LINC01556Q5JQF7 62 aa10.85□□□□□ -0.67
USE1-201ENST00000263897 LELP1Q5T871 98 aa10.85□□□□□ -0.67
USE1-201ENST00000263897 SYT8Q8NBV8 401 aa10.85□□□□□ -0.67
USE1-201ENST00000263897 SAMD10Q9BYL1 202 aa10.85□□□□□ -0.67
USE1-201ENST00000263897 PGPEP1Q9NXJ5 209 aa10.85□□□□□ -0.67
USE1-201ENST00000263897 OR10J3Q5JRS4 329 aa10.84□□□□□ -0.67
USE1-201ENST00000263897 SCRT2Q9NQ03 307 aa10.84□□□□□ -0.67
USE1-201ENST00000263897 PHLDA3Q9Y5J5 127 aa10.84□□□□□ -0.67
USE1-201ENST00000263897 A0A087WTM6 91 aa10.83□□□□□ -0.68
USE1-201ENST00000263897 TMSB15BA0A087X1C1 80 aa10.83□□□□□ -0.68
USE1-201ENST00000263897 SCO2A0A1W2PP80 73 aa10.83□□□□□ -0.68
USE1-201ENST00000263897 GAGE12JA6NER3 117 aa10.83□□□□□ -0.68
USE1-201ENST00000263897 GAGE1Q13065 139 aa10.83□□□□□ -0.68
USE1-201ENST00000263897 GAGE4Q13068 117 aa10.83□□□□□ -0.68
USE1-201ENST00000263897 GAGE5Q13069 117 aa10.83□□□□□ -0.68
USE1-201ENST00000263897 GAGE13Q4V321 117 aa10.83□□□□□ -0.68
USE1-201ENST00000263897 SFRP2Q96HF1 295 aa10.83□□□□□ -0.68
USE1-201ENST00000263897 MLST8Q9BVC4 326 aa10.83□□□□□ -0.68
USE1-201ENST00000263897 Q9UF83 564 aa10.83□□□□□ -0.68
USE1-201ENST00000263897 PCLOQ9Y6V0 5065 aa10.83□□□□□ -0.68
USE1-201ENST00000263897 RYR1P21817 5038 aa10.82□□□□□ -0.68
USE1-201ENST00000263897 IBA57-AS1B1ANH7 110 aa10.82□□□□□ -0.68
USE1-201ENST00000263897 RHODO00212 210 aa10.82□□□□□ -0.68
USE1-201ENST00000263897 LINC00694P0DN24 101 aa10.82□□□□□ -0.68
USE1-201ENST00000263897 BAGE2Q86Y30 109 aa10.82□□□□□ -0.68
USE1-201ENST00000263897 C14orf178Q8N769 122 aaPredicted RBP10.82□□□□□ -0.68
USE1-201ENST00000263897 KRTAP4-5Q9BYR2 181 aa10.82□□□□□ -0.68
USE1-201ENST00000263897 TRAV1-1A0A0B4J248 108 aa10.81□□□□□ -0.68
USE1-201ENST00000263897 CCL20P78556 96 aa10.81□□□□□ -0.68
USE1-201ENST00000263897 M0R381 172 aa10.8□□□□□ -0.68
USE1-201ENST00000263897 IGHV3-30P01768 117 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms