RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 ODF3Q96PU9 254 aa13.26□□□□□ -0.29
SDF4-201ENST00000263741 GOLT1BQ9Y3E0 138 aa13.26□□□□□ -0.29
SDF4-201ENST00000263741 TRAV12-3A0A0B4J271 114 aa13.25□□□□□ -0.29
SDF4-201ENST00000263741 TRAV34A0A0B4J273 112 aa13.25□□□□□ -0.29
SDF4-201ENST00000263741 IGHV4-28A0A0C4DH34 117 aa13.25□□□□□ -0.29
SDF4-201ENST00000263741 TSPOP30536 169 aa13.25□□□□□ -0.29
SDF4-201ENST00000263741 MRPL52Q86TS9 123 aaKnown RBP13.25□□□□□ -0.29
SDF4-201ENST00000263741 ZFAND2AQ8N6M9 145 aa13.25□□□□□ -0.29
SDF4-201ENST00000263741 EDA2RQ9HAV5 297 aa13.25□□□□□ -0.29
SDF4-201ENST00000263741 TP53TG3Q9ULZ0 132 aa13.25□□□□□ -0.29
SDF4-201ENST00000263741 SMIM27A0A1W2PRY6 76 aa13.25□□□□□ -0.29
SDF4-201ENST00000263741 PEX7O00628 323 aa13.25□□□□□ -0.29
SDF4-201ENST00000263741 Q8NAQ8 132 aa13.25□□□□□ -0.29
SDF4-201ENST00000263741 ATG101Q9BSB4 218 aa13.25□□□□□ -0.29
SDF4-201ENST00000263741 RNASE4P34096 147 aaKnown RBP13.24□□□□□ -0.29
SDF4-201ENST00000263741 RASL11AQ6T310 242 aa13.24□□□□□ -0.29
SDF4-201ENST00000263741 TMEM136Q6ZRR5 245 aa13.24□□□□□ -0.29
SDF4-201ENST00000263741 KLLNB2CW77 178 aa13.24□□□□□ -0.29
SDF4-201ENST00000263741 M0R143 59 aa13.24□□□□□ -0.29
SDF4-201ENST00000263741 IGLV2-11P01706 119 aa13.24□□□□□ -0.29
SDF4-201ENST00000263741 HTN1P15515 57 aa13.24□□□□□ -0.29
SDF4-201ENST00000263741 TEX43Q6ZNM6 134 aa13.24□□□□□ -0.29
SDF4-201ENST00000263741 FAM231DQ6ZW35 169 aa13.24□□□□□ -0.29
SDF4-201ENST00000263741 KCNS1Q96KK3 526 aa13.24□□□□□ -0.29
SDF4-201ENST00000263741 IGLV2-8P01709 118 aa13.23□□□□□ -0.29
SDF4-201ENST00000263741 GPX1P07203 203 aa13.23□□□□□ -0.29
SDF4-201ENST00000263741 TCL1AP56279 114 aa13.23□□□□□ -0.29
SDF4-201ENST00000263741 C7orf71A4D174 169 aa13.22□□□□□ -0.29
SDF4-201ENST00000263741 LINC00310P59036 64 aa13.22□□□□□ -0.29
SDF4-201ENST00000263741 PRNTQ86SH4 94 aa13.22□□□□□ -0.29
SDF4-201ENST00000263741 LINC01587Q99440 93 aa13.22□□□□□ -0.29
SDF4-201ENST00000263741 C20orf144Q9BQM9 153 aa13.22□□□□□ -0.29
SDF4-201ENST00000263741 VAMP8Q9BV40 100 aa13.22□□□□□ -0.29
SDF4-201ENST00000263741 C8orf49Q96NF6 230 aa13.22□□□□□ -0.29
SDF4-201ENST00000263741 PSG8Q9UQ74 426 aa13.22□□□□□ -0.29
SDF4-201ENST00000263741 K7EQM0 130 aa13.21□□□□□ -0.29
SDF4-201ENST00000263741 APCSP02743 223 aa13.21□□□□□ -0.29
SDF4-201ENST00000263741 EMP1P54849 157 aa13.21□□□□□ -0.29
SDF4-201ENST00000263741 MRPL54Q6P161 138 aaKnown RBP13.21□□□□□ -0.29
SDF4-201ENST00000263741 SMIM12Q96EX1 92 aa13.21□□□□□ -0.29
SDF4-201ENST00000263741 SPINK4O60575 86 aa13.2□□□□□ -0.3
SDF4-201ENST00000263741 MIFP14174 115 aa13.2□□□□□ -0.3
SDF4-201ENST00000263741 UBE2G1P62253 170 aa13.2□□□□□ -0.3
SDF4-201ENST00000263741 TMEM75Q8N9X5 138 aa13.2□□□□□ -0.3
SDF4-201ENST00000263741 SERTM2A0A1B0GWG4 89 aa13.2□□□□□ -0.3
SDF4-201ENST00000263741 EREGO14944 169 aa13.2□□□□□ -0.3
SDF4-201ENST00000263741 AZU1P20160 251 aa13.2□□□□□ -0.3
SDF4-201ENST00000263741 DNAH7Q8WXX0 4024 aa13.19□□□□□ -0.3
SDF4-201ENST00000263741 AMTP48728 403 aa13.19□□□□□ -0.3
SDF4-201ENST00000263741 Q86TA4 180 aa13.19□□□□□ -0.3
SDF4-201ENST00000263741 WWC2-AS2Q96NR7 200 aa13.19□□□□□ -0.3
SDF4-201ENST00000263741 SRIP30626 198 aa13.19□□□□□ -0.3
SDF4-201ENST00000263741 RRN3P1Q2M238 152 aa13.19□□□□□ -0.3
SDF4-201ENST00000263741 ZNF324O75467 553 aaPredicted RBP13.18□□□□□ -0.3
SDF4-201ENST00000263741 NEU1Q99519 415 aa13.18□□□□□ -0.3
SDF4-201ENST00000263741 MIEN1Q9BRT3 115 aa13.18□□□□□ -0.3
SDF4-201ENST00000263741 C11orf68Q9H3H3 251 aaKnown RBP13.18□□□□□ -0.3
SDF4-201ENST00000263741 CELA1Q9UNI1 258 aa13.18□□□□□ -0.3
SDF4-201ENST00000263741 F2Z2F3 143 aa13.17□□□□□ -0.3
SDF4-201ENST00000263741 RAB4AP20338 218 aa13.17□□□□□ -0.3
SDF4-201ENST00000263741 KRTDAPP60985 99 aa13.17□□□□□ -0.3
SDF4-201ENST00000263741 NHLRC2Q8NBF2 726 aa13.17□□□□□ -0.3
SDF4-201ENST00000263741 SNHG12Q9BXW3 62 aa13.17□□□□□ -0.3
SDF4-201ENST00000263741 LENEPQ9Y5L5 61 aa13.17□□□□□ -0.3
SDF4-201ENST00000263741 MUC21Q5SSG8 566 aa13.17□□□□□ -0.3
SDF4-201ENST00000263741 ATP5L2Q7Z4Y8 100 aa13.17□□□□□ -0.3
SDF4-201ENST00000263741 NDFIP1Q9BT67 221 aa13.17□□□□□ -0.3
SDF4-201ENST00000263741 TRBV7-9A0A0J9YWB2 115 aa13.16□□□□□ -0.3
SDF4-201ENST00000263741 TCAPO15273 167 aa13.16□□□□□ -0.3
SDF4-201ENST00000263741 PMCHP20382 165 aa13.16□□□□□ -0.3
SDF4-201ENST00000263741 ZNF80P51504 273 aaPredicted RBP13.16□□□□□ -0.3
SDF4-201ENST00000263741 KIAA1644Q3SXP7 199 aa13.16□□□□□ -0.3
SDF4-201ENST00000263741 SMIM9A6NGZ8 99 aa13.16□□□□□ -0.3
SDF4-201ENST00000263741 TSKUQ8WUA8 353 aa13.16□□□□□ -0.3
SDF4-201ENST00000263741 PAM16Q9Y3D7 125 aa13.16□□□□□ -0.3
SDF4-201ENST00000263741 CSMD3Q7Z407 3707 aa13.15□□□□□ -0.3
SDF4-201ENST00000263741 NUDT10Q8NFP7 164 aa13.15□□□□□ -0.3
SDF4-201ENST00000263741 NUDT11Q96G61 164 aa13.15□□□□□ -0.3
SDF4-201ENST00000263741 FMC1Q96HJ9 113 aa13.15□□□□□ -0.3
SDF4-201ENST00000263741 NANOS2P60321 138 aaKnown RBP13.14□□□□□ -0.31
SDF4-201ENST00000263741 PRR27Q6MZM9 219 aa13.14□□□□□ -0.31
SDF4-201ENST00000263741 IL17DQ8TAD2 202 aa13.14□□□□□ -0.31
SDF4-201ENST00000263741 BORCS7Q96B45 105 aa13.14□□□□□ -0.31
SDF4-201ENST00000263741 PLAC8L1A1L4L8 177 aa13.14□□□□□ -0.31
SDF4-201ENST00000263741 FAM162BQ5T6X4 162 aa13.14□□□□□ -0.31
SDF4-201ENST00000263741 Q6AWC8 147 aa13.14□□□□□ -0.31
SDF4-201ENST00000263741 KLF12Q9Y4X4 402 aa13.14□□□□□ -0.31
SDF4-201ENST00000263741 ZFAND6Q6FIF0 208 aa13.13□□□□□ -0.31
SDF4-201ENST00000263741 NUP35Q8NFH5 326 aa13.13□□□□□ -0.31
SDF4-201ENST00000263741 RNASE8Q8TDE3 154 aaKnown RBP13.13□□□□□ -0.31
SDF4-201ENST00000263741 CBY3A6NI87 242 aa13.12□□□□□ -0.31
SDF4-201ENST00000263741 CT83Q5H943 113 aa13.12□□□□□ -0.31
SDF4-201ENST00000263741 FBLL1A6NHQ2 334 aaKnown RBP13.12□□□□□ -0.31
SDF4-201ENST00000263741 FAM222AQ5U5X8 452 aa13.12□□□□□ -0.31
SDF4-201ENST00000263741 C11orf45Q8TAV5 145 aa13.12□□□□□ -0.31
SDF4-201ENST00000263741 MUC7Q8TAX7 377 aa13.12□□□□□ -0.31
SDF4-201ENST00000263741 ZC2HC1AQ96GY0 325 aa13.12□□□□□ -0.31
SDF4-201ENST00000263741 RPP21Q9H633 154 aaKnown RBP13.12□□□□□ -0.31
SDF4-201ENST00000263741 IGHV1OR15-1A0A075B7D0 117 aa13.11□□□□□ -0.31
SDF4-201ENST00000263741 LTAP01374 205 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms