RNA–Protein interactions for RNA: ENST00000262585.6

DENND3-201, Transcript of DENN domain containing 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene DENND3, Length 5,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-201ENST00000262585 C5orf42Q9H799 3197 aa12.87□□□□□ -0.35
DENND3-201ENST00000262585 I3L3M4 83 aa12.87□□□□□ -0.35
DENND3-201ENST00000262585 SPTBN4Q9H254 2564 aa12.86□□□□□ -0.35
DENND3-201ENST00000262585 VPREB3Q9UKI3 123 aa12.86□□□□□ -0.35
DENND3-201ENST00000262585 Q71RC1 249 aaPredicted RBP12.86□□□□□ -0.35
DENND3-201ENST00000262585 A0A087WX48 190 aa12.86□□□□□ -0.35
DENND3-201ENST00000262585 RPL39LQ96EH5 51 aaKnown RBP12.86□□□□□ -0.35
DENND3-201ENST00000262585 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.85□□□□□ -0.35
DENND3-201ENST00000262585 HLA-DRB4P13762 266 aa12.85□□□□□ -0.35
DENND3-201ENST00000262585 MRPL53Q96EL3 112 aaKnown RBP12.85□□□□□ -0.35
DENND3-201ENST00000262585 HLA-DRB4X5D2U9 266 aa12.85□□□□□ -0.35
DENND3-201ENST00000262585 C1QTNF4Q9BXJ3 329 aa12.85□□□□□ -0.35
DENND3-201ENST00000262585 C19orf71A6NCJ1 209 aa12.85□□□□□ -0.35
DENND3-201ENST00000262585 C16orf54Q6UWD8 224 aa12.85□□□□□ -0.35
DENND3-201ENST00000262585 TSPAN13O95857 204 aa12.84□□□□□ -0.35
DENND3-201ENST00000262585 RNASE13Q5GAN3 156 aaKnown RBP12.84□□□□□ -0.35
DENND3-201ENST00000262585 ZNRF2Q8NHG8 242 aa12.84□□□□□ -0.35
DENND3-201ENST00000262585 DLX4Q92988 240 aaPredicted RBP12.84□□□□□ -0.35
DENND3-201ENST00000262585 LENEPQ9Y5L5 61 aa12.84□□□□□ -0.35
DENND3-201ENST00000262585 MYMXA0A1B0GTQ4 84 aa12.84□□□□□ -0.35
DENND3-201ENST00000262585 ANKRD39Q53RE8 183 aa12.84□□□□□ -0.35
DENND3-201ENST00000262585 CHD7Q9P2D1 2997 aa12.84□□□□□ -0.35
DENND3-201ENST00000262585 K7ERJ3 54 aa12.84□□□□□ -0.35
DENND3-201ENST00000262585 TRBV12-3P01733 135 aa12.84□□□□□ -0.35
DENND3-201ENST00000262585 C20orf78Q9BR46 151 aa12.84□□□□□ -0.35
DENND3-201ENST00000262585 RHODO00212 210 aa12.84□□□□□ -0.35
DENND3-201ENST00000262585 PRIMA1Q86XR5 153 aa12.84□□□□□ -0.35
DENND3-201ENST00000262585 TMEM141Q96I45 108 aa12.84□□□□□ -0.35
DENND3-201ENST00000262585 C9orf118A6NHY6 69 aa12.83□□□□□ -0.35
DENND3-201ENST00000262585 UNQ9165/PRO28630Q6UXU0 137 aa12.83□□□□□ -0.35
DENND3-201ENST00000262585 PRSS29PA6NIE9 313 aa12.83□□□□□ -0.36
DENND3-201ENST00000262585 RASL10AQ92737 203 aa12.83□□□□□ -0.36
DENND3-201ENST00000262585 YPEL4Q96NS1 127 aa12.83□□□□□ -0.36
DENND3-201ENST00000262585 C19orf84I3L1E1 186 aa12.83□□□□□ -0.36
DENND3-201ENST00000262585 LMO4P61968 165 aa12.83□□□□□ -0.36
DENND3-201ENST00000262585 ADAMTSL5Q6ZMM2 481 aa12.83□□□□□ -0.36
DENND3-201ENST00000262585 ATP6V0BQ99437 205 aa12.83□□□□□ -0.36
DENND3-201ENST00000262585 SIGMAR1Q99720 223 aa12.83□□□□□ -0.36
DENND3-201ENST00000262585 USP9XQ93008 2570 aaPredicted RBP12.83□□□□□ -0.36
DENND3-201ENST00000262585 CST9LQ9H4G1 147 aa12.83□□□□□ -0.36
DENND3-201ENST00000262585 AZU1P20160 251 aa12.83□□□□□ -0.36
DENND3-201ENST00000262585 SLURP1P55000 103 aa12.83□□□□□ -0.36
DENND3-201ENST00000262585 GDF5OSQ5U4N7 250 aa12.83□□□□□ -0.36
DENND3-201ENST00000262585 USP9YO00507 2555 aaPredicted RBP12.82□□□□□ -0.36
DENND3-201ENST00000262585 RBMY1BA6NDE4 496 aaKnown RBP12.82□□□□□ -0.36
DENND3-201ENST00000262585 RBMY1EA6NEQ0 496 aaKnown RBP12.82□□□□□ -0.36
DENND3-201ENST00000262585 GAGE7O76087 117 aa12.82□□□□□ -0.36
DENND3-201ENST00000262585 RBMY1DP0C7P1 496 aaKnown RBP12.82□□□□□ -0.36
DENND3-201ENST00000262585 GAGE12FP0CL80 117 aa12.82□□□□□ -0.36
DENND3-201ENST00000262585 GAGE12GP0CL81 117 aa12.82□□□□□ -0.36
DENND3-201ENST00000262585 GAGE12IP0CL82 117 aa12.82□□□□□ -0.36
DENND3-201ENST00000262585 RBMY1A1P0DJD3 496 aaKnown RBP12.82□□□□□ -0.36
DENND3-201ENST00000262585 RBMY1CP0DJD4 496 aa12.82□□□□□ -0.36
DENND3-201ENST00000262585 SETD2Q9BYW2 2564 aaPredicted RBP12.82□□□□□ -0.36
DENND3-201ENST00000262585 HTTP42858 3142 aa12.81□□□□□ -0.36
DENND3-201ENST00000262585 PAX4O43316 350 aa12.81□□□□□ -0.36
DENND3-201ENST00000262585 LGALS1P09382 135 aaKnown RBP12.81□□□□□ -0.36
DENND3-201ENST00000262585 TTTY13Q9BZ97 58 aa12.81□□□□□ -0.36
DENND3-201ENST00000262585 ODF3BA8MYP8 253 aa12.8□□□□□ -0.36
DENND3-201ENST00000262585 ZNF80P51504 273 aaPredicted RBP12.8□□□□□ -0.36
DENND3-201ENST00000262585 LINC01545Q5VT33 79 aa12.8□□□□□ -0.36
DENND3-201ENST00000262585 APRG1Q8IVJ8 170 aa12.8□□□□□ -0.36
DENND3-201ENST00000262585 C6orf226Q5I0X4 101 aa12.8□□□□□ -0.36
DENND3-201ENST00000262585 OCIAD2Q56VL3 154 aa12.79□□□□□ -0.36
DENND3-201ENST00000262585 GTSF1LQ9H1H1 148 aa12.79□□□□□ -0.36
DENND3-201ENST00000262585 ZNF493Q6ZR52 646 aa12.79□□□□□ -0.36
DENND3-201ENST00000262585 RANBP2P49792 3224 aaKnown RBP12.79□□□□□ -0.36
DENND3-201ENST00000262585 CKS1BP61024 79 aa12.79□□□□□ -0.36
DENND3-201ENST00000262585 FOXI2Q6ZQN5 318 aa12.79□□□□□ -0.36
DENND3-201ENST00000262585 DSCAML1Q8TD84 2053 aa12.79□□□□□ -0.36
DENND3-201ENST00000262585 A0A1B0GV72 72 aa12.79□□□□□ -0.36
DENND3-201ENST00000262585 ATG2AQ2TAZ0 1938 aa12.79□□□□□ -0.36
DENND3-201ENST00000262585 VWC2LB2RUY7 222 aa12.79□□□□□ -0.36
DENND3-201ENST00000262585 MLST8Q9BVC4 326 aa12.79□□□□□ -0.36
DENND3-201ENST00000262585 CRYGBP07316 175 aa12.78□□□□□ -0.36
DENND3-201ENST00000262585 ETDBQ3ZM63 59 aa12.78□□□□□ -0.36
DENND3-201ENST00000262585 CCDC140Q96MF4 163 aa12.78□□□□□ -0.36
DENND3-201ENST00000262585 C9JAW5 83 aa12.78□□□□□ -0.36
DENND3-201ENST00000262585 AMTNQ6UX39 209 aa12.78□□□□□ -0.36
DENND3-201ENST00000262585 C10orf126Q8N4M7 172 aa12.78□□□□□ -0.36
DENND3-201ENST00000262585 TMEM86BQ8N661 226 aa12.78□□□□□ -0.36
DENND3-201ENST00000262585 A0A1B0GXF2 115 aa12.77□□□□□ -0.36
DENND3-201ENST00000262585 IGHG2P01859 326 aa12.77□□□□□ -0.36
DENND3-201ENST00000262585 LOXL1Q08397 574 aaPredicted RBP12.77□□□□□ -0.37
DENND3-201ENST00000262585 CEND1Q8N111 149 aa12.77□□□□□ -0.37
DENND3-201ENST00000262585 ATXN8Q156A1 80 aa12.77□□□□□ -0.37
DENND3-201ENST00000262585 C9orf47Q6ZRZ4 202 aa12.76□□□□□ -0.37
DENND3-201ENST00000262585 DPH3Q96FX2 82 aa12.76□□□□□ -0.37
DENND3-201ENST00000262585 RNF114Q9Y508 228 aa12.76□□□□□ -0.37
DENND3-201ENST00000262585 J3QQQ9 107 aa12.76□□□□□ -0.37
DENND3-201ENST00000262585 DEFB113Q30KQ7 82 aa12.76□□□□□ -0.37
DENND3-201ENST00000262585 IGHV4OR15-8A0A075B7B6 117 aa12.76□□□□□ -0.37
DENND3-201ENST00000262585 A0A087WW49 117 aa12.76□□□□□ -0.37
DENND3-201ENST00000262585 ZNF48Q96MX3 618 aaPredicted RBP12.76□□□□□ -0.37
DENND3-201ENST00000262585 CRPP02741 224 aa12.76□□□□□ -0.37
DENND3-201ENST00000262585 C2orf82Q6UX34 121 aa12.76□□□□□ -0.37
DENND3-201ENST00000262585 TRAV8-3A0A0A6YYJ7 113 aa12.75□□□□□ -0.37
DENND3-201ENST00000262585 CTRLP40313 264 aa12.75□□□□□ -0.37
DENND3-201ENST00000262585 NDUFA12Q9UI09 145 aa12.75□□□□□ -0.37
DENND3-201ENST00000262585 K7EMI3 77 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms