RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 IGKV3D-20A0A0C4DH25 116 aa17.19■□□□□ 0.34
MCF2L-201ENST00000261963 DOPEY1Q5JWR5 2465 aa17.19■□□□□ 0.34
MCF2L-201ENST00000261963 A0A087WX48 190 aa17.19■□□□□ 0.34
MCF2L-201ENST00000261963 HOXA3O43365 443 aaPredicted RBP17.19■□□□□ 0.34
MCF2L-201ENST00000261963 LINC01619G3V211 115 aa17.18■□□□□ 0.34
MCF2L-201ENST00000261963 TRBV12-3P01733 135 aa17.18■□□□□ 0.34
MCF2L-201ENST00000261963 USP9XQ93008 2570 aaPredicted RBP17.18■□□□□ 0.34
MCF2L-201ENST00000261963 PLNP26678 52 aa17.18■□□□□ 0.34
MCF2L-201ENST00000261963 CFAP126Q5VTH2 177 aa17.18■□□□□ 0.34
MCF2L-201ENST00000261963 GLMPQ8WWB7 406 aa17.18■□□□□ 0.34
MCF2L-201ENST00000261963 IGLV2-18A0A075B6J9 118 aa17.17■□□□□ 0.34
MCF2L-201ENST00000261963 IGHV4-30-2A0A087WSY4 118 aa17.17■□□□□ 0.34
MCF2L-201ENST00000261963 IGF1P05019 195 aa17.17■□□□□ 0.34
MCF2L-201ENST00000261963 LY6EQ16553 131 aa17.17■□□□□ 0.34
MCF2L-201ENST00000261963 MORN3Q6PF18 240 aaPredicted RBP17.17■□□□□ 0.34
MCF2L-201ENST00000261963 ARL3P36405 182 aa17.17■□□□□ 0.34
MCF2L-201ENST00000261963 UNQ9165/PRO28630Q6UXU0 137 aa17.17■□□□□ 0.34
MCF2L-201ENST00000261963 TMEM78Q5T7P6 136 aa17.16■□□□□ 0.34
MCF2L-201ENST00000261963 IGSF10Q6WRI0 2623 aa17.16■□□□□ 0.34
MCF2L-201ENST00000261963 DLX4Q92988 240 aaPredicted RBP17.16■□□□□ 0.34
MCF2L-201ENST00000261963 CELSR2Q9HCU4 2923 aa17.16■□□□□ 0.34
MCF2L-201ENST00000261963 MT-ATP8P03928 68 aa17.16■□□□□ 0.34
MCF2L-201ENST00000261963 LAGE3Q14657 143 aa17.16■□□□□ 0.34
MCF2L-201ENST00000261963 C9orf47Q6ZRZ4 202 aa17.16■□□□□ 0.34
MCF2L-201ENST00000261963 PGPEP1Q9NXJ5 209 aa17.16■□□□□ 0.34
MCF2L-201ENST00000261963 MYMXA0A1B0GTQ4 84 aa17.15■□□□□ 0.34
MCF2L-201ENST00000261963 SMCPP49901 116 aaPredicted RBP17.15■□□□□ 0.34
MCF2L-201ENST00000261963 HIF1ANQ9NWT6 349 aa17.15■□□□□ 0.34
MCF2L-201ENST00000261963 A6NDX4 124 aa17.14■□□□□ 0.33
MCF2L-201ENST00000261963 ATP5J2P56134 94 aa17.14■□□□□ 0.33
MCF2L-201ENST00000261963 Q6ZQT7 251 aa17.14■□□□□ 0.33
MCF2L-201ENST00000261963 LCNL1Q6ZST4 164 aa17.14■□□□□ 0.33
MCF2L-201ENST00000261963 NFE4Q86UQ8 179 aa17.14■□□□□ 0.33
MCF2L-201ENST00000261963 C20orf173Q96LM9 149 aa17.14■□□□□ 0.33
MCF2L-201ENST00000261963 OR11H12B2RN74 326 aa17.13■□□□□ 0.33
MCF2L-201ENST00000261963 H3BUX3 64 aa17.13■□□□□ 0.33
MCF2L-201ENST00000261963 IGHG2P01859 326 aa17.13■□□□□ 0.33
MCF2L-201ENST00000261963 Q6ZUT4 128 aa17.13■□□□□ 0.33
MCF2L-201ENST00000261963 OR11H1Q8NG94 326 aa17.13■□□□□ 0.33
MCF2L-201ENST00000261963 OR11H2Q8NH07 326 aa17.13■□□□□ 0.33
MCF2L-201ENST00000261963 GPHB5Q86YW7 130 aa17.13■□□□□ 0.33
MCF2L-201ENST00000261963 C16orf92Q96LL3 132 aa17.13■□□□□ 0.33
MCF2L-201ENST00000261963 TSPAN13O95857 204 aa17.12■□□□□ 0.33
MCF2L-201ENST00000261963 AGRNO00468 2067 aa17.12■□□□□ 0.33
MCF2L-201ENST00000261963 XGP55808 180 aa17.11■□□□□ 0.33
MCF2L-201ENST00000261963 Q6ZS46 218 aa17.11■□□□□ 0.33
MCF2L-201ENST00000261963 KLK15Q9H2R5 256 aa17.11■□□□□ 0.33
MCF2L-201ENST00000261963 IGHV7-4-1A0A0J9YVY3 117 aa17.11■□□□□ 0.33
MCF2L-201ENST00000261963 H7C1H1 209 aa17.11■□□□□ 0.33
MCF2L-201ENST00000261963 NDUFA4O00483 81 aa17.11■□□□□ 0.33
MCF2L-201ENST00000261963 BRI3O95415 125 aa17.11■□□□□ 0.33
MCF2L-201ENST00000261963 C9orf139Q6ZV77 190 aa17.11■□□□□ 0.33
MCF2L-201ENST00000261963 ERG28Q9UKR5 140 aa17.11■□□□□ 0.33
MCF2L-201ENST00000261963 MSMBP08118 114 aa17.1■□□□□ 0.33
MCF2L-201ENST00000261963 BLCAPP62952 87 aa17.1■□□□□ 0.33
MCF2L-201ENST00000261963 FHL3Q13643 280 aa17.1■□□□□ 0.33
MCF2L-201ENST00000261963 PRR9Q5T870 116 aa17.1■□□□□ 0.33
MCF2L-201ENST00000261963 F8VRH5 84 aa17.1■□□□□ 0.33
MCF2L-201ENST00000261963 IGHV3-11P01762 117 aa17.1■□□□□ 0.33
MCF2L-201ENST00000261963 PSMB2P49721 201 aa17.1■□□□□ 0.33
MCF2L-201ENST00000261963 TRAV12-1A0A0B4J245 112 aa17.09■□□□□ 0.33
MCF2L-201ENST00000261963 A6NJY4 79 aa17.09■□□□□ 0.33
MCF2L-201ENST00000261963 H3BUA1 57 aa17.09■□□□□ 0.33
MCF2L-201ENST00000261963 SOCS3O14543 225 aa17.08■□□□□ 0.33
MCF2L-201ENST00000261963 RNF183Q96D59 192 aa17.08■□□□□ 0.33
MCF2L-201ENST00000261963 USMG5Q96IX5 58 aa17.08■□□□□ 0.33
MCF2L-201ENST00000261963 LINC01549A6NIU2 74 aa17.08■□□□□ 0.32
MCF2L-201ENST00000261963 AVPP01185 164 aa17.08■□□□□ 0.32
MCF2L-201ENST00000261963 LGALS1P09382 135 aaKnown RBP17.08■□□□□ 0.32
MCF2L-201ENST00000261963 NRACQ8N912 160 aa17.08■□□□□ 0.32
MCF2L-201ENST00000261963 PPDPFLQ8WWR9 84 aa17.08■□□□□ 0.32
MCF2L-201ENST00000261963 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.07■□□□□ 0.321e-6■■□□□ 12.4
MCF2L-201ENST00000261963 LOC107984156A0A0G2JMH3 177 aa17.07■□□□□ 0.32
MCF2L-201ENST00000261963 ARL17AQ8IVW1 177 aa17.07■□□□□ 0.32
MCF2L-201ENST00000261963 VCX2Q9H322 139 aa17.07■□□□□ 0.32
MCF2L-201ENST00000261963 UTP20O75691 2785 aaKnown RBP17.06■□□□□ 0.32
MCF2L-201ENST00000261963 PF4V1P10720 104 aa17.06■□□□□ 0.32
MCF2L-201ENST00000261963 CRYBG3Q68DQ2 2970 aa17.06■□□□□ 0.32
MCF2L-201ENST00000261963 MYO18BQ8IUG5 2567 aa17.05■□□□□ 0.32
MCF2L-201ENST00000261963 DEFB1P60022 68 aa17.05■□□□□ 0.32
MCF2L-201ENST00000261963 LENEPQ9Y5L5 61 aa17.05■□□□□ 0.32
MCF2L-201ENST00000261963 CSPG4Q6UVK1 2322 aa17.05■□□□□ 0.32
MCF2L-201ENST00000261963 TRAV26-2A0A0B4J265 109 aa17.05■□□□□ 0.32
MCF2L-201ENST00000261963 TEN1Q86WV5 123 aa17.05■□□□□ 0.32
MCF2L-201ENST00000261963 PTH2Q96A98 100 aa17.05■□□□□ 0.32
MCF2L-201ENST00000261963 CARD19Q96LW7 228 aa17.05■□□□□ 0.32
MCF2L-201ENST00000261963 IGLV1-40P01703 118 aa17.04■□□□□ 0.32
MCF2L-201ENST00000261963 ZFP2Q6ZN57 461 aa17.04■□□□□ 0.32
MCF2L-201ENST00000261963 ZFAND2AQ8N6M9 145 aa17.04■□□□□ 0.32
MCF2L-201ENST00000261963 ACACBO00763 2458 aa17.04■□□□□ 0.32
MCF2L-201ENST00000261963 IGHV4-4A0A075B6R2 117 aa17.04■□□□□ 0.32
MCF2L-201ENST00000261963 GATA3P23771 443 aa17.04■□□□□ 0.32
MCF2L-201ENST00000261963 LYRM7Q5U5X0 104 aa17.04■□□□□ 0.32
MCF2L-201ENST00000261963 SFTA2Q6UW10 78 aa17.04■□□□□ 0.32
MCF2L-201ENST00000261963 ANAPC13Q9BS18 74 aa17.04■□□□□ 0.32
MCF2L-201ENST00000261963 NRGNQ92686 78 aa17.03■□□□□ 0.32
MCF2L-201ENST00000261963 UBE2D1P51668 147 aa17.02■□□□□ 0.32
MCF2L-201ENST00000261963 LINC00477Q96M19 166 aa17.02■□□□□ 0.32
MCF2L-201ENST00000261963 UFC1Q9Y3C8 167 aa17.02■□□□□ 0.32
MCF2L-201ENST00000261963 UBE2D3P61077 147 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms