RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 TSPAN13O95857 204 aa12.11□□□□□ -0.47
LMNB1-201ENST00000261366 ZFP36P26651 326 aaKnown RBP12.11□□□□□ -0.47
LMNB1-201ENST00000261366 H7C2G1 150 aa12.1□□□□□ -0.47
LMNB1-201ENST00000261366 TMEM219Q86XT9 240 aa12.1□□□□□ -0.47
LMNB1-201ENST00000261366 C1QTNF4Q9BXJ3 329 aa12.1□□□□□ -0.47
LMNB1-201ENST00000261366 GEMIN7Q9H840 131 aaKnown RBP12.1□□□□□ -0.47
LMNB1-201ENST00000261366 IGHV3OR16-10A0A075B7F0 116 aa12.1□□□□□ -0.47
LMNB1-201ENST00000261366 ORMDL2Q53FV1 153 aa12.1□□□□□ -0.47
LMNB1-201ENST00000261366 CFAP126Q5VTH2 177 aa12.1□□□□□ -0.47
LMNB1-201ENST00000261366 RNASE4P34096 147 aaKnown RBP12.09□□□□□ -0.47
LMNB1-201ENST00000261366 CDSNQ15517 529 aa12.09□□□□□ -0.47
LMNB1-201ENST00000261366 TOMM6Q96B49 74 aa12.09□□□□□ -0.47
LMNB1-201ENST00000261366 RBAKDNA6NC62 111 aa12.09□□□□□ -0.47
LMNB1-201ENST00000261366 CCL21O00585 134 aa12.09□□□□□ -0.47
LMNB1-201ENST00000261366 KIR2DL4Q99706 377 aa12.09□□□□□ -0.47
LMNB1-201ENST00000261366 CDIP1Q9H305 208 aa12.09□□□□□ -0.47
LMNB1-201ENST00000261366 RPL39P62891 51 aaKnown RBP12.08□□□□□ -0.47
LMNB1-201ENST00000261366 Q6ZS46 218 aa12.08□□□□□ -0.47
LMNB1-201ENST00000261366 JPT2Q9H910 190 aa12.08□□□□□ -0.47
LMNB1-201ENST00000261366 SCGB1C2P0DMR2 95 aa12.08□□□□□ -0.48
LMNB1-201ENST00000261366 CRYBA4P53673 196 aa12.08□□□□□ -0.48
LMNB1-201ENST00000261366 XGP55808 180 aa12.08□□□□□ -0.48
LMNB1-201ENST00000261366 ANXA2RQ3ZCQ2 193 aa12.08□□□□□ -0.48
LMNB1-201ENST00000261366 Q8N6K4 173 aa12.08□□□□□ -0.48
LMNB1-201ENST00000261366 TRAV12-1A0A0B4J245 112 aa12.08□□□□□ -0.48
LMNB1-201ENST00000261366 C11orf86A6NJI1 115 aa12.08□□□□□ -0.48
LMNB1-201ENST00000261366 SRD5A1P18405 259 aa12.08□□□□□ -0.48
LMNB1-201ENST00000261366 MRAP2Q96G30 205 aa12.08□□□□□ -0.48
LMNB1-201ENST00000261366 TMEM170BQ5T4T1 132 aa12.07□□□□□ -0.48
LMNB1-201ENST00000261366 FAM110DQ8TAY7 271 aaPredicted RBP12.07□□□□□ -0.48
LMNB1-201ENST00000261366 IGHV3-64A0A075B6Q5 118 aa12.07□□□□□ -0.48
LMNB1-201ENST00000261366 VPS13CQ709C8 3753 aa12.07□□□□□ -0.48
LMNB1-201ENST00000261366 SORL1Q92673 2214 aa12.07□□□□□ -0.48
LMNB1-201ENST00000261366 TMEM238LA0A1B0GVL6 79 aa12.06□□□□□ -0.48
LMNB1-201ENST00000261366 A6NJY4 79 aa12.06□□□□□ -0.48
LMNB1-201ENST00000261366 M0R1W7 72 aa12.06□□□□□ -0.48
LMNB1-201ENST00000261366 RAX2Q96IS3 184 aa12.06□□□□□ -0.48
LMNB1-201ENST00000261366 DPH3P1Q9H4G8 78 aa12.06□□□□□ -0.48
LMNB1-201ENST00000261366 TP53TG1Q9Y2A0 90 aa12.06□□□□□ -0.48
LMNB1-201ENST00000261366 TCL1BO95988 128 aa12.06□□□□□ -0.48
LMNB1-201ENST00000261366 A0A087WWL8 130 aa12.05□□□□□ -0.48
LMNB1-201ENST00000261366 F5H697 171 aa12.05□□□□□ -0.48
LMNB1-201ENST00000261366 TRBV12-3P01733 135 aa12.05□□□□□ -0.48
LMNB1-201ENST00000261366 ASIPP42127 132 aa12.05□□□□□ -0.48
LMNB1-201ENST00000261366 UNQ9165/PRO28630Q6UXU0 137 aa12.05□□□□□ -0.48
LMNB1-201ENST00000261366 C9orf47Q6ZRZ4 202 aa12.05□□□□□ -0.48
LMNB1-201ENST00000261366 CREBBPQ92793 2442 aa12.05□□□□□ -0.48
LMNB1-201ENST00000261366 CARD19Q96LW7 228 aa12.05□□□□□ -0.48
LMNB1-201ENST00000261366 IGHV3-11P01762 117 aa12.04□□□□□ -0.48
LMNB1-201ENST00000261366 EEF1AKMT3Q96AZ1 226 aa12.04□□□□□ -0.48
LMNB1-201ENST00000261366 PRSS47A8MTI9 375 aa12.04□□□□□ -0.48
LMNB1-201ENST00000261366 CRYGDP07320 174 aa12.04□□□□□ -0.48
LMNB1-201ENST00000261366 TSPEAR-AS2P59090 65 aa12.04□□□□□ -0.48
LMNB1-201ENST00000261366 GATA3P23771 443 aa12.04□□□□□ -0.48
LMNB1-201ENST00000261366 SAA4P35542 130 aa12.04□□□□□ -0.48
LMNB1-201ENST00000261366 FAM74A4Q5TZK3 123 aa12.04□□□□□ -0.48
LMNB1-201ENST00000261366 Q6ZUT4 128 aa12.04□□□□□ -0.48
LMNB1-201ENST00000261366 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.04□□□□□ -0.481e-6■■□□□ 12.4
LMNB1-201ENST00000261366 CUBNO60494 3623 aa12.04□□□□□ -0.48
LMNB1-201ENST00000261366 RNF223E7ERA6 249 aa12.03□□□□□ -0.48
LMNB1-201ENST00000261366 ZFAND2AQ8N6M9 145 aa12.03□□□□□ -0.48
LMNB1-201ENST00000261366 UBE2D1P51668 147 aa12.03□□□□□ -0.48
LMNB1-201ENST00000261366 NDUFA11Q86Y39 141 aa12.03□□□□□ -0.48
LMNB1-201ENST00000261366 OR10J6PQ8NGY7 276 aa12.03□□□□□ -0.48
LMNB1-201ENST00000261366 OPRPNQ99935 248 aaPredicted RBP12.03□□□□□ -0.48
LMNB1-201ENST00000261366 SPG11Q96JI7 2443 aa12.03□□□□□ -0.48
LMNB1-201ENST00000261366 MUC4Q99102 2169 aa12.02□□□□□ -0.48
LMNB1-201ENST00000261366 IGHV4-4A0A075B6R2 117 aa12.02□□□□□ -0.48
LMNB1-201ENST00000261366 TSHBP01222 138 aa12.02□□□□□ -0.49
LMNB1-201ENST00000261366 CD7P09564 240 aa12.02□□□□□ -0.49
LMNB1-201ENST00000261366 COX6B1P14854 86 aa12.02□□□□□ -0.49
LMNB1-201ENST00000261366 ZNF256Q9Y2P7 627 aaPredicted RBP12.02□□□□□ -0.49
LMNB1-201ENST00000261366 TRAV21A0A0B4J279 112 aa12.01□□□□□ -0.49
LMNB1-201ENST00000261366 A0A0J9YY99 117 aa12.01□□□□□ -0.49
LMNB1-201ENST00000261366 KLRB1Q12918 225 aa12.01□□□□□ -0.49
LMNB1-201ENST00000261366 TCTEX1D4Q5JR98 221 aa12.01□□□□□ -0.49
LMNB1-201ENST00000261366 CFC1BP0CG36 223 aa12.01□□□□□ -0.49
LMNB1-201ENST00000261366 CFC1P0CG37 223 aa12.01□□□□□ -0.49
LMNB1-201ENST00000261366 UCNP55089 124 aa12.01□□□□□ -0.49
LMNB1-201ENST00000261366 ADORA2A-AS1P86434 159 aa12.01□□□□□ -0.49
LMNB1-201ENST00000261366 TRPT1Q86TN4 253 aaKnown RBP12.01□□□□□ -0.49
LMNB1-201ENST00000261366 ANKRD29Q8N6D5 301 aa12.01□□□□□ -0.49
LMNB1-201ENST00000261366 RNF183Q96D59 192 aa12.01□□□□□ -0.49
LMNB1-201ENST00000261366 CRYBG3Q68DQ2 2970 aa12□□□□□ -0.49
LMNB1-201ENST00000261366 IGLV4-69A0A075B6H9 119 aa12□□□□□ -0.49
LMNB1-201ENST00000261366 CRIP2P52943 208 aaPredicted RBP12□□□□□ -0.49
LMNB1-201ENST00000261366 BEX4Q9NWD9 120 aaPredicted RBP12□□□□□ -0.49
LMNB1-201ENST00000261366 EBI3Q14213 229 aa12□□□□□ -0.49
LMNB1-201ENST00000261366 A8MWV9 139 aa11.99□□□□□ -0.49
LMNB1-201ENST00000261366 IGKV3-20P01619 116 aa11.99□□□□□ -0.49
LMNB1-201ENST00000261366 TEN1Q86WV5 123 aa11.99□□□□□ -0.49
LMNB1-201ENST00000261366 GPHB5Q86YW7 130 aa11.99□□□□□ -0.49
LMNB1-201ENST00000261366 UBTD1Q9HAC8 227 aa11.99□□□□□ -0.49
LMNB1-201ENST00000261366 RNASE3P12724 160 aaKnown RBP11.99□□□□□ -0.49
LMNB1-201ENST00000261366 UBE2D3P61077 147 aa11.99□□□□□ -0.49
LMNB1-201ENST00000261366 HERVK_113P61574 105 aa11.99□□□□□ -0.49
LMNB1-201ENST00000261366 UBE2D2P62837 147 aa11.99□□□□□ -0.49
LMNB1-201ENST00000261366 ITPR1Q14643 2758 aa11.99□□□□□ -0.49
LMNB1-201ENST00000261366 PPDPFLQ8WWR9 84 aa11.99□□□□□ -0.49
LMNB1-201ENST00000261366 MINOS1Q5TGZ0 78 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms