RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 CAMK2N2Q96S95 79 aa9.4□□□□□ -0.9
COL8A1-201ENST00000261037 ZNF747Q9BV97 191 aa9.4□□□□□ -0.9
COL8A1-201ENST00000261037 K7EIM0 57 aa9.4□□□□□ -0.9
COL8A1-201ENST00000261037 BAALC-AS2P0C853 105 aa9.4□□□□□ -0.9
COL8A1-201ENST00000261037 TRACP01848 142 aa9.39□□□□□ -0.91
COL8A1-201ENST00000261037 TIRAPP58753 221 aa9.39□□□□□ -0.91
COL8A1-201ENST00000261037 LINC00173Q6ZV60 143 aa9.39□□□□□ -0.91
COL8A1-201ENST00000261037 ORMDL1Q9P0S3 153 aa9.39□□□□□ -0.91
COL8A1-201ENST00000261037 DOCK9Q9BZ29 2069 aa9.39□□□□□ -0.91
COL8A1-201ENST00000261037 DAND5Q8N907 189 aa9.39□□□□□ -0.91
COL8A1-201ENST00000261037 ATP6V0E2Q8NHE4 81 aa9.39□□□□□ -0.91
COL8A1-201ENST00000261037 PRAC2D3DTV9 90 aa9.39□□□□□ -0.91
COL8A1-201ENST00000261037 LTBP2Q14767 1821 aa9.39□□□□□ -0.91
COL8A1-201ENST00000261037 IGLV11-55A0A075B6I3 123 aa9.38□□□□□ -0.91
COL8A1-201ENST00000261037 CFC1BP0CG36 223 aa9.38□□□□□ -0.91
COL8A1-201ENST00000261037 CFC1P0CG37 223 aa9.38□□□□□ -0.91
COL8A1-201ENST00000261037 ANKRD29Q8N6D5 301 aa9.38□□□□□ -0.91
COL8A1-201ENST00000261037 C5orf56Q8N8D9 126 aa9.38□□□□□ -0.91
COL8A1-201ENST00000261037 ETDCA0A1B0GVM5 59 aa9.38□□□□□ -0.91
COL8A1-201ENST00000261037 KIF26AQ9ULI4 1882 aaPredicted RBP9.38□□□□□ -0.91
COL8A1-201ENST00000261037 CCL25O15444 150 aa9.38□□□□□ -0.91
COL8A1-201ENST00000261037 AKAP6Q13023 2319 aa9.38□□□□□ -0.91
COL8A1-201ENST00000261037 ZFP36P26651 326 aaKnown RBP9.38□□□□□ -0.91
COL8A1-201ENST00000261037 PATE2Q6UY27 113 aa9.38□□□□□ -0.91
COL8A1-201ENST00000261037 CTSGP08311 255 aa9.38□□□□□ -0.91
COL8A1-201ENST00000261037 C16orf54Q6UWD8 224 aa9.37□□□□□ -0.91
COL8A1-201ENST00000261037 TIMM17AQ99595 171 aa9.37□□□□□ -0.91
COL8A1-201ENST00000261037 CITED1Q99966 193 aa9.37□□□□□ -0.91
COL8A1-201ENST00000261037 GAGE12HA6NDE8 117 aa9.37□□□□□ -0.91
COL8A1-201ENST00000261037 RPL39P62891 51 aaKnown RBP9.37□□□□□ -0.91
COL8A1-201ENST00000261037 ZFP2Q6ZN57 461 aa9.37□□□□□ -0.91
COL8A1-201ENST00000261037 C10orf105Q8TEF2 133 aa9.37□□□□□ -0.91
COL8A1-201ENST00000261037 ZNF503Q96F45 646 aa9.37□□□□□ -0.91
COL8A1-201ENST00000261037 COX7B2Q8TF08 81 aa9.37□□□□□ -0.91
COL8A1-201ENST00000261037 KRTAP27-1Q3LI81 207 aa9.36□□□□□ -0.91
COL8A1-201ENST00000261037 Q8N9W7 124 aa9.36□□□□□ -0.91
COL8A1-201ENST00000261037 SIVA1O15304 175 aa9.36□□□□□ -0.91
COL8A1-201ENST00000261037 ATP5G1P05496 136 aa9.36□□□□□ -0.91
COL8A1-201ENST00000261037 SPART-AS1P0CW21 52 aa9.36□□□□□ -0.91
COL8A1-201ENST00000261037 Q8N1Y9 231 aa9.36□□□□□ -0.91
COL8A1-201ENST00000261037 COL6A6A6NMZ7 2263 aa9.36□□□□□ -0.91
COL8A1-201ENST00000261037 IL15RAQ13261 267 aa9.36□□□□□ -0.91
COL8A1-201ENST00000261037 MUSTN1Q8IVN3 82 aa9.36□□□□□ -0.91
COL8A1-201ENST00000261037 HEATR5AQ86XA9 2040 aa9.36□□□□□ -0.91
COL8A1-201ENST00000261037 DOCK11Q5JSL3 2073 aa9.36□□□□□ -0.91
COL8A1-201ENST00000261037 A0A0J9YXV3 536 aa9.36□□□□□ -0.91
COL8A1-201ENST00000261037 COX7A2LO14548 114 aa9.36□□□□□ -0.91
COL8A1-201ENST00000261037 HIST2H2BCQ6DN03 193 aa9.36□□□□□ -0.91
COL8A1-201ENST00000261037 SPANXA1Q9NS26 97 aa9.36□□□□□ -0.91
COL8A1-201ENST00000261037 IGFL2Q6UWQ7 119 aa9.36□□□□□ -0.91
COL8A1-201ENST00000261037 ARFGEF3Q5TH69 2177 aa9.36□□□□□ -0.91
COL8A1-201ENST00000261037 PROP1O75360 226 aa9.35□□□□□ -0.91
COL8A1-201ENST00000261037 MRPL23Q16540 153 aaKnown RBP9.35□□□□□ -0.91
COL8A1-201ENST00000261037 CCL18P55774 89 aa9.35□□□□□ -0.91
COL8A1-201ENST00000261037 DEFB135Q30KP9 77 aa9.35□□□□□ -0.91
COL8A1-201ENST00000261037 NUPR1O60356 82 aa9.35□□□□□ -0.91
COL8A1-201ENST00000261037 HERV-K104P63124 156 aa9.35□□□□□ -0.91
COL8A1-201ENST00000261037 C2orf70A6NJV1 201 aa9.34□□□□□ -0.91
COL8A1-201ENST00000261037 C2orf16Q68DN1 1984 aa9.34□□□□□ -0.91
COL8A1-201ENST00000261037 IGKV1-17P01599 117 aa9.34□□□□□ -0.91
COL8A1-201ENST00000261037 CLPSL1A2RUU4 121 aa9.34□□□□□ -0.91
COL8A1-201ENST00000261037 TRBV12-3P01733 135 aa9.34□□□□□ -0.91
COL8A1-201ENST00000261037 Q8N7P7 452 aa9.34□□□□□ -0.91
COL8A1-201ENST00000261037 WFDC11Q8NEX6 87 aa9.34□□□□□ -0.91
COL8A1-201ENST00000261037 SND1-IT1Q9HBX3 110 aa9.34□□□□□ -0.91
COL8A1-201ENST00000261037 DENND4CQ5VZ89 1909 aa9.34□□□□□ -0.91
COL8A1-201ENST00000261037 Q8NFD4 153 aa9.33□□□□□ -0.92
COL8A1-201ENST00000261037 ZNF407Q9C0G0 2248 aa9.33□□□□□ -0.92
COL8A1-201ENST00000261037 DAZ2Q13117 558 aaKnown RBP9.33□□□□□ -0.92
COL8A1-201ENST00000261037 DAZ4Q86SG3 579 aaKnown RBP9.33□□□□□ -0.92
COL8A1-201ENST00000261037 DAZ3Q9NR90 486 aaKnown RBP9.33□□□□□ -0.92
COL8A1-201ENST00000261037 HHLA3Q9XRX5 114 aa9.33□□□□□ -0.92
COL8A1-201ENST00000261037 LENEPQ9Y5L5 61 aa9.33□□□□□ -0.92
COL8A1-201ENST00000261037 WI2-2373I1.2A0A1W2PRP0 233 aa9.33□□□□□ -0.92
COL8A1-201ENST00000261037 WISP2O76076 250 aa9.33□□□□□ -0.92
COL8A1-201ENST00000261037 CACNA1HO95180 2353 aa9.33□□□□□ -0.92
COL8A1-201ENST00000261037 TEX22C9J3V5 150 aa9.33□□□□□ -0.92
COL8A1-201ENST00000261037 E7EUB6 86 aa9.32□□□□□ -0.92
COL8A1-201ENST00000261037 SEM1Q6ZVN7 128 aa9.32□□□□□ -0.92
COL8A1-201ENST00000261037 GTSF1Q8WW33 167 aa9.32□□□□□ -0.92
COL8A1-201ENST00000261037 PLA2G2EQ9NZK7 142 aa9.32□□□□□ -0.92
COL8A1-201ENST00000261037 PLXNB3Q9ULL4 1909 aa9.32□□□□□ -0.92
COL8A1-201ENST00000261037 NCKAP5O14513 1909 aa9.32□□□□□ -0.92
COL8A1-201ENST00000261037 A0A1W2PNU3 283 aaPredicted RBP9.32□□□□□ -0.92
COL8A1-201ENST00000261037 PRSS47A8MTI9 375 aa9.32□□□□□ -0.92
COL8A1-201ENST00000261037 DOCK7Q96N67 2140 aa9.32□□□□□ -0.92
COL8A1-201ENST00000261037 SH2D6Q7Z4S9 175 aa9.32□□□□□ -0.92
COL8A1-201ENST00000261037 CACNA1BQ00975 2339 aa9.31□□□□□ -0.92
COL8A1-201ENST00000261037 ANKRD39Q53RE8 183 aa9.31□□□□□ -0.92
COL8A1-201ENST00000261037 LYPD6BQ8NI32 183 aa9.31□□□□□ -0.92
COL8A1-201ENST00000261037 IGF2-ASQ6U949 168 aa9.31□□□□□ -0.92
COL8A1-201ENST00000261037 TTTY13Q9BZ97 58 aa9.31□□□□□ -0.92
COL8A1-201ENST00000261037 DIDO1Q9BTC0 2240 aaKnown RBP9.31□□□□□ -0.92
COL8A1-201ENST00000261037 TEX48A0A1B0GUV7 120 aa9.31□□□□□ -0.92
COL8A1-201ENST00000261037 C5orf47Q569G3 176 aa9.31□□□□□ -0.92
COL8A1-201ENST00000261037 C4orf3Q8WVX3 66 aa9.31□□□□□ -0.92
COL8A1-201ENST00000261037 IGKV3D-7A0A0C4DH55 119 aa9.31□□□□□ -0.92
COL8A1-201ENST00000261037 UBE2AP49459 152 aa9.31□□□□□ -0.92
COL8A1-201ENST00000261037 BAALCQ8WXS3 180 aa9.31□□□□□ -0.92
COL8A1-201ENST00000261037 MRPL36Q9P0J6 103 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms