RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 PSMB2P49721 201 aa8.22□□□□□ -1.09
CHRNA1-201ENST00000261007 CCDC140Q96MF4 163 aa8.22□□□□□ -1.09
CHRNA1-201ENST00000261007 IGHV4-30-2A0A087WSY4 118 aa8.21□□□□□ -1.09
CHRNA1-201ENST00000261007 PRAC2D3DTV9 90 aa8.21□□□□□ -1.09
CHRNA1-201ENST00000261007 G3V318 75 aa8.21□□□□□ -1.09
CHRNA1-201ENST00000261007 M0QXV9 152 aa8.21□□□□□ -1.09
CHRNA1-201ENST00000261007 XGP55808 180 aa8.21□□□□□ -1.09
CHRNA1-201ENST00000261007 IGFL4Q6B9Z1 124 aa8.21□□□□□ -1.09
CHRNA1-201ENST00000261007 CLEC19AQ6UXS0 136 aa8.21□□□□□ -1.09
CHRNA1-201ENST00000261007 USMG5Q96IX5 58 aa8.21□□□□□ -1.09
CHRNA1-201ENST00000261007 CARD19Q96LW7 228 aa8.21□□□□□ -1.09
CHRNA1-201ENST00000261007 PRADC1Q9BSG0 188 aa8.21□□□□□ -1.09
CHRNA1-201ENST00000261007 C11orf21Q9P2W6 132 aa8.21□□□□□ -1.09
CHRNA1-201ENST00000261007 ZNF580Q9UK33 172 aa8.21□□□□□ -1.09
CHRNA1-201ENST00000261007 WNK2Q9Y3S1 2297 aa8.21□□□□□ -1.1
CHRNA1-201ENST00000261007 A6NDX4 124 aa8.21□□□□□ -1.1
CHRNA1-201ENST00000261007 ZNF815PA8K554 130 aa8.21□□□□□ -1.1
CHRNA1-201ENST00000261007 CD7P09564 240 aa8.21□□□□□ -1.1
CHRNA1-201ENST00000261007 COX6B1P14854 86 aa8.21□□□□□ -1.1
CHRNA1-201ENST00000261007 LCE2DQ5TA82 110 aaPredicted RBP8.21□□□□□ -1.1
CHRNA1-201ENST00000261007 AGPAT4-IT1Q9H0P7 198 aa8.21□□□□□ -1.1
CHRNA1-201ENST00000261007 ABCA1O95477 2261 aa8.2□□□□□ -1.1
CHRNA1-201ENST00000261007 NCOR2Q9Y618 2525 aa8.2□□□□□ -1.1
CHRNA1-201ENST00000261007 TRAV26-2A0A0B4J265 109 aa8.2□□□□□ -1.1
CHRNA1-201ENST00000261007 J3QLI3 93 aa8.2□□□□□ -1.1
CHRNA1-201ENST00000261007 IGHG2P01859 326 aa8.2□□□□□ -1.1
CHRNA1-201ENST00000261007 ZNF688P0C7X2 276 aa8.2□□□□□ -1.1
CHRNA1-201ENST00000261007 SRSF9Q13242 221 aaKnown RBP eCLIP8.2□□□□□ -1.1
CHRNA1-201ENST00000261007 FHL3Q13643 280 aa8.2□□□□□ -1.1
CHRNA1-201ENST00000261007 PAPPA-AS1Q5QFB9 102 aa8.2□□□□□ -1.1
CHRNA1-201ENST00000261007 SPANXN1Q5VSR9 72 aa8.2□□□□□ -1.1
CHRNA1-201ENST00000261007 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.2□□□□□ -1.1
CHRNA1-201ENST00000261007 TMEM219Q86XT9 240 aa8.2□□□□□ -1.1
CHRNA1-201ENST00000261007 UFC1Q9Y3C8 167 aa8.2□□□□□ -1.1
CHRNA1-201ENST00000261007 AGRNO00468 2067 aa8.2□□□□□ -1.1
CHRNA1-201ENST00000261007 LOC107984156A0A0G2JMH3 177 aa8.19□□□□□ -1.1
CHRNA1-201ENST00000261007 A8MWV9 139 aa8.19□□□□□ -1.1
CHRNA1-201ENST00000261007 SUMO2P61956 95 aaKnown RBP8.19□□□□□ -1.1
CHRNA1-201ENST00000261007 SCGB1D4Q6XE38 83 aa8.19□□□□□ -1.1
CHRNA1-201ENST00000261007 BRD3OSQ6XYD6 125 aa8.19□□□□□ -1.1
CHRNA1-201ENST00000261007 ARL17AQ8IVW1 177 aa8.19□□□□□ -1.1
CHRNA1-201ENST00000261007 BAALCQ8WXS3 180 aa8.19□□□□□ -1.1
CHRNA1-201ENST00000261007 U3KQE9 123 aa8.19□□□□□ -1.1
CHRNA1-201ENST00000261007 IGHV3OR16-10A0A075B7F0 116 aa8.19□□□□□ -1.1
CHRNA1-201ENST00000261007 LINC01548A6NM66 108 aa8.19□□□□□ -1.1
CHRNA1-201ENST00000261007 M0R381 172 aa8.19□□□□□ -1.1
CHRNA1-201ENST00000261007 ZFP2Q6ZN57 461 aa8.19□□□□□ -1.1
CHRNA1-201ENST00000261007 C9orf47Q6ZRZ4 202 aa8.19□□□□□ -1.1
CHRNA1-201ENST00000261007 NDUFA11Q86Y39 141 aa8.19□□□□□ -1.1
CHRNA1-201ENST00000261007 CLPSL1A2RUU4 121 aa8.18□□□□□ -1.1
CHRNA1-201ENST00000261007 H3BUX3 64 aa8.18□□□□□ -1.1
CHRNA1-201ENST00000261007 NDUFA4O00483 81 aa8.18□□□□□ -1.1
CHRNA1-201ENST00000261007 PPP1R17O96001 155 aa8.18□□□□□ -1.1
CHRNA1-201ENST00000261007 IGHV4-38-2P0DP08 117 aa8.18□□□□□ -1.1
CHRNA1-201ENST00000261007 ZFAND6Q6FIF0 208 aa8.18□□□□□ -1.1
CHRNA1-201ENST00000261007 LINC01356Q8N9X3 169 aa8.18□□□□□ -1.1
CHRNA1-201ENST00000261007 GLMPQ8WWB7 406 aa8.18□□□□□ -1.1
CHRNA1-201ENST00000261007 RNF183Q96D59 192 aa8.18□□□□□ -1.1
CHRNA1-201ENST00000261007 LENEPQ9Y5L5 61 aa8.18□□□□□ -1.1
CHRNA1-201ENST00000261007 CACNA1AO00555 2505 aa8.18□□□□□ -1.1
CHRNA1-201ENST00000261007 PRSS29PA6NIE9 313 aa8.17□□□□□ -1.1
CHRNA1-201ENST00000261007 ARL3P36405 182 aa8.17□□□□□ -1.1
CHRNA1-201ENST00000261007 HERVK_113P61574 105 aa8.17□□□□□ -1.1
CHRNA1-201ENST00000261007 C2orf66Q6UXQ4 117 aa8.17□□□□□ -1.1
CHRNA1-201ENST00000261007 PLEKHB2Q96CS7 222 aa8.17□□□□□ -1.1
CHRNA1-201ENST00000261007 HRNRQ86YZ3 2850 aaPredicted RBP8.17□□□□□ -1.1
CHRNA1-201ENST00000261007 TCL1BO95988 128 aa8.17□□□□□ -1.1
CHRNA1-201ENST00000261007 ASIPP42127 132 aa8.17□□□□□ -1.1
CHRNA1-201ENST00000261007 GAGE5Q13069 117 aa8.17□□□□□ -1.1
CHRNA1-201ENST00000261007 GAGE6Q13070 117 aa8.17□□□□□ -1.1
CHRNA1-201ENST00000261007 RASL10AQ92737 203 aa8.17□□□□□ -1.1
CHRNA1-201ENST00000261007 ANAPC13Q9BS18 74 aa8.17□□□□□ -1.1
CHRNA1-201ENST00000261007 PIEZO1Q92508 2521 aa8.17□□□□□ -1.1
CHRNA1-201ENST00000261007 KALRNO60229 2985 aa8.16□□□□□ -1.1
CHRNA1-201ENST00000261007 IGHV3-35A0A0C4DH35 117 aa8.16□□□□□ -1.1
CHRNA1-201ENST00000261007 A0A0J9YY99 117 aa8.16□□□□□ -1.1
CHRNA1-201ENST00000261007 C9orf139Q6ZV77 190 aa8.16□□□□□ -1.1
CHRNA1-201ENST00000261007 C10orf126Q8N4M7 172 aa8.16□□□□□ -1.1
CHRNA1-201ENST00000261007 RNF182Q8N6D2 247 aa8.16□□□□□ -1.1
CHRNA1-201ENST00000261007 TEX29Q8N6K0 151 aa8.16□□□□□ -1.1
CHRNA1-201ENST00000261007 PTH2Q96A98 100 aa8.16□□□□□ -1.1
CHRNA1-201ENST00000261007 CITED1Q99966 193 aa8.16□□□□□ -1.1
CHRNA1-201ENST00000261007 DPH3P1Q9H4G8 78 aa8.16□□□□□ -1.1
CHRNA1-201ENST00000261007 TRAV8-2A0A0B4J237 113 aa8.15□□□□□ -1.1
CHRNA1-201ENST00000261007 MED14OSP0DP75 135 aa8.15□□□□□ -1.1
CHRNA1-201ENST00000261007 SRD5A1P18405 259 aa8.15□□□□□ -1.1
CHRNA1-201ENST00000261007 RPL32P62910 135 aaKnown RBP8.15□□□□□ -1.1
CHRNA1-201ENST00000261007 TMEM89A2RUT3 159 aa8.15□□□□□ -1.11
CHRNA1-201ENST00000261007 IGHV3-30P01768 117 aa8.15□□□□□ -1.11
CHRNA1-201ENST00000261007 IGHV3-30-5P0DP03 117 aa8.15□□□□□ -1.11
CHRNA1-201ENST00000261007 LY6EQ16553 131 aa8.15□□□□□ -1.11
CHRNA1-201ENST00000261007 SLC25A29Q8N8R3 303 aa8.15□□□□□ -1.11
CHRNA1-201ENST00000261007 LINC01600Q96MT4 127 aa8.15□□□□□ -1.11
CHRNA1-201ENST00000261007 KLK15Q9H2R5 256 aa8.15□□□□□ -1.11
CHRNA1-201ENST00000261007 CHD8Q9HCK8 2581 aa8.14□□□□□ -1.11
CHRNA1-201ENST00000261007 PKD1L2Q7Z442 2459 aa8.14□□□□□ -1.11
CHRNA1-201ENST00000261007 RNF223E7ERA6 249 aa8.14□□□□□ -1.11
CHRNA1-201ENST00000261007 H3BVH4 76 aa8.14□□□□□ -1.11
CHRNA1-201ENST00000261007 CFC1BP0CG36 223 aa8.14□□□□□ -1.11
CHRNA1-201ENST00000261007 CFC1P0CG37 223 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms