RNA–Protein interactions for RNA: ENST00000260383.11

TUBGCP4-201, Transcript of tubulin gamma complex associated protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TUBGCP4, Length 2,617 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-201ENST00000260383 ATMQ13315 3056 aa10.12□□□□□ -0.79
TUBGCP4-201ENST00000260383 CD59P13987 128 aa10.12□□□□□ -0.79
TUBGCP4-201ENST00000260383 RPL13AP40429 203 aaKnown RBP10.12□□□□□ -0.79
TUBGCP4-201ENST00000260383 ZNF56Q15929 161 aa10.12□□□□□ -0.79
TUBGCP4-201ENST00000260383 SLC50A1Q9BRV3 221 aa10.12□□□□□ -0.79
TUBGCP4-201ENST00000260383 IGHV4-4A0A075B6R2 117 aa10.12□□□□□ -0.79
TUBGCP4-201ENST00000260383 IGHV3-66A0A0C4DH42 116 aa10.12□□□□□ -0.79
TUBGCP4-201ENST00000260383 POLEQ07864 2286 aa10.12□□□□□ -0.79
TUBGCP4-201ENST00000260383 M0R381 172 aa10.11□□□□□ -0.79
TUBGCP4-201ENST00000260383 TMEM170BQ5T4T1 132 aa10.11□□□□□ -0.79
TUBGCP4-201ENST00000260383 C17orf100A8MU93 164 aa10.11□□□□□ -0.79
TUBGCP4-201ENST00000260383 H3BMM0 161 aa10.11□□□□□ -0.79
TUBGCP4-201ENST00000260383 P0DMU3 169 aa10.11□□□□□ -0.79
TUBGCP4-201ENST00000260383 FAM231AP0DMU4 169 aa10.11□□□□□ -0.79
TUBGCP4-201ENST00000260383 FAM231CP0DMU5 169 aa10.11□□□□□ -0.79
TUBGCP4-201ENST00000260383 LINC00694P0DN24 101 aa10.11□□□□□ -0.79
TUBGCP4-201ENST00000260383 HERVK_113P61574 105 aa10.11□□□□□ -0.79
TUBGCP4-201ENST00000260383 ATXN8Q156A1 80 aa10.11□□□□□ -0.79
TUBGCP4-201ENST00000260383 Q1RN00 199 aa10.11□□□□□ -0.79
TUBGCP4-201ENST00000260383 UBE2WQ96B02 151 aa10.11□□□□□ -0.79
TUBGCP4-201ENST00000260383 IGLV11-55A0A075B6I3 123 aa10.1□□□□□ -0.79
TUBGCP4-201ENST00000260383 IGHV3OR16-13A0A075B7E8 117 aa10.1□□□□□ -0.79
TUBGCP4-201ENST00000260383 IGHV3-74A0A0B4J1X5 117 aa10.1□□□□□ -0.79
TUBGCP4-201ENST00000260383 ZNRF2Q8NHG8 242 aa10.1□□□□□ -0.79
TUBGCP4-201ENST00000260383 DUX3Q96PT4 197 aa10.1□□□□□ -0.79
TUBGCP4-201ENST00000260383 TMEM126AQ9H061 195 aa10.1□□□□□ -0.79
TUBGCP4-201ENST00000260383 RELNP78509 3460 aa10.1□□□□□ -0.79
TUBGCP4-201ENST00000260383 TRBV10-2A0A0K0K1G8 114 aa10.1□□□□□ -0.79
TUBGCP4-201ENST00000260383 LOC107984640A0A0U1RRK4 108 aa10.1□□□□□ -0.79
TUBGCP4-201ENST00000260383 CTSGP08311 255 aa10.1□□□□□ -0.79
TUBGCP4-201ENST00000260383 FAM27E3Q08E93 113 aa10.1□□□□□ -0.79
TUBGCP4-201ENST00000260383 MUSTN1Q8IVN3 82 aa10.1□□□□□ -0.79
TUBGCP4-201ENST00000260383 J3KRW8 73 aa10.09□□□□□ -0.79
TUBGCP4-201ENST00000260383 LPAL2Q16609 132 aa10.09□□□□□ -0.79
TUBGCP4-201ENST00000260383 SPANXA1Q9NS26 97 aa10.09□□□□□ -0.79
TUBGCP4-201ENST00000260383 CSDC2Q9Y534 153 aaKnown RBP10.09□□□□□ -0.79
TUBGCP4-201ENST00000260383 J3QQQ9 107 aa10.09□□□□□ -0.79
TUBGCP4-201ENST00000260383 RPL39P62891 51 aaKnown RBP10.09□□□□□ -0.79
TUBGCP4-201ENST00000260383 PRR9Q5T870 116 aa10.09□□□□□ -0.79
TUBGCP4-201ENST00000260383 DCHS2Q6V1P9 2916 aa10.09□□□□□ -0.79
TUBGCP4-201ENST00000260383 TRIAP1O43715 76 aa10.08□□□□□ -0.8
TUBGCP4-201ENST00000260383 IGF1P05019 195 aa10.08□□□□□ -0.8
TUBGCP4-201ENST00000260383 MGPP08493 103 aa10.08□□□□□ -0.8
TUBGCP4-201ENST00000260383 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.08□□□□□ -0.8
TUBGCP4-201ENST00000260383 TP53TG1Q9Y2A0 90 aa10.08□□□□□ -0.8
TUBGCP4-201ENST00000260383 ARHGAP32A7KAX9 2087 aa10.08□□□□□ -0.8
TUBGCP4-201ENST00000260383 C2orf82Q6UX34 121 aa10.08□□□□□ -0.8
TUBGCP4-201ENST00000260383 NRGNQ92686 78 aa10.08□□□□□ -0.8
TUBGCP4-201ENST00000260383 OOSP1A8MZH6 123 aa10.07□□□□□ -0.8
TUBGCP4-201ENST00000260383 CEMP1Q6PRD7 247 aaPredicted RBP10.07□□□□□ -0.8
TUBGCP4-201ENST00000260383 IGIPA6NJ69 53 aa10.07□□□□□ -0.8
TUBGCP4-201ENST00000260383 H7C423 109 aa10.07□□□□□ -0.8
TUBGCP4-201ENST00000260383 ADIPOQQ15848 244 aa10.07□□□□□ -0.8
TUBGCP4-201ENST00000260383 IGHV3-64A0A075B6Q5 118 aa10.06□□□□□ -0.8
TUBGCP4-201ENST00000260383 A0A0B4J2C4 111 aa10.06□□□□□ -0.8
TUBGCP4-201ENST00000260383 RBAKDNA6NC62 111 aa10.06□□□□□ -0.8
TUBGCP4-201ENST00000260383 ZNF22P17026 224 aaPredicted RBP10.06□□□□□ -0.8
TUBGCP4-201ENST00000260383 NDPQ00604 133 aa10.06□□□□□ -0.8
TUBGCP4-201ENST00000260383 PMVKQ15126 192 aa10.06□□□□□ -0.8
TUBGCP4-201ENST00000260383 FDCSPQ8NFU4 85 aa10.06□□□□□ -0.8
TUBGCP4-201ENST00000260383 LINC01600Q96MT4 127 aa10.06□□□□□ -0.8
TUBGCP4-201ENST00000260383 MAP1BP46821 2468 aaKnown RBP10.06□□□□□ -0.8
TUBGCP4-201ENST00000260383 IGHV3-49A0A0A0MS15 119 aa10.06□□□□□ -0.8
TUBGCP4-201ENST00000260383 LGALS3P17931 250 aaKnown RBP10.06□□□□□ -0.8
TUBGCP4-201ENST00000260383 GPHB5Q86YW7 130 aa10.06□□□□□ -0.8
TUBGCP4-201ENST00000260383 LRBAP50851 2863 aa10.06□□□□□ -0.8
TUBGCP4-201ENST00000260383 TRGV11A0A075B6L2 103 aa10.05□□□□□ -0.8
TUBGCP4-201ENST00000260383 FAM236AA0A1B0GUQ0 79 aa10.05□□□□□ -0.8
TUBGCP4-201ENST00000260383 FAM236BA0A1B0GV22 79 aa10.05□□□□□ -0.8
TUBGCP4-201ENST00000260383 NBR2O15453 112 aa10.05□□□□□ -0.8
TUBGCP4-201ENST00000260383 DPH3P1Q9H4G8 78 aa10.05□□□□□ -0.8
TUBGCP4-201ENST00000260383 PAPPA-AS1Q5QFB9 102 aa10.05□□□□□ -0.8
TUBGCP4-201ENST00000260383 KLK5Q9Y337 293 aaPredicted RBP10.05□□□□□ -0.8
TUBGCP4-201ENST00000260383 CACNA1HO95180 2353 aa10.05□□□□□ -0.8
TUBGCP4-201ENST00000260383 MBD3L4A6NDZ8 208 aaPredicted RBP10.04□□□□□ -0.8
TUBGCP4-201ENST00000260383 MBD3L3A6NE82 208 aaPredicted RBP10.04□□□□□ -0.8
TUBGCP4-201ENST00000260383 MBD3L5A6NJ08 208 aaPredicted RBP10.04□□□□□ -0.8
TUBGCP4-201ENST00000260383 BUB3O43684 328 aa10.04□□□□□ -0.8
TUBGCP4-201ENST00000260383 MBD3L2Q8NHZ7 208 aaPredicted RBP10.04□□□□□ -0.8
TUBGCP4-201ENST00000260383 TRBV7-7A0A0K0K1E9 115 aa10.04□□□□□ -0.8
TUBGCP4-201ENST00000260383 EBI3Q14213 229 aa10.04□□□□□ -0.8
TUBGCP4-201ENST00000260383 ASCL5Q7RTU5 278 aa10.04□□□□□ -0.8
TUBGCP4-201ENST00000260383 DNAJC30Q96LL9 226 aa10.04□□□□□ -0.8
TUBGCP4-201ENST00000260383 ZNF580Q9UK33 172 aa10.04□□□□□ -0.8
TUBGCP4-201ENST00000260383 CACNA1BQ00975 2339 aa10.04□□□□□ -0.8
TUBGCP4-201ENST00000260383 LY6LH3BQJ8 138 aa10.03□□□□□ -0.8
TUBGCP4-201ENST00000260383 M0R2P5 195 aa10.03□□□□□ -0.8
TUBGCP4-201ENST00000260383 MRPL23Q16540 153 aaKnown RBP10.03□□□□□ -0.8
TUBGCP4-201ENST00000260383 Q6ZSV7 163 aa10.03□□□□□ -0.8
TUBGCP4-201ENST00000260383 CNOT1A5YKK6 2376 aaKnown RBP10.03□□□□□ -0.8
TUBGCP4-201ENST00000260383 TRBV30A0A0K0K1B3 111 aa10.03□□□□□ -0.8
TUBGCP4-201ENST00000260383 POM121L12Q8N7R1 296 aa10.03□□□□□ -0.8
TUBGCP4-201ENST00000260383 OPRPNQ99935 248 aaPredicted RBP10.03□□□□□ -0.8
TUBGCP4-201ENST00000260383 RNF5Q99942 180 aa10.03□□□□□ -0.8
TUBGCP4-201ENST00000260383 KAAG1Q9UBP8 84 aa10.03□□□□□ -0.8
TUBGCP4-201ENST00000260383 CLEC2BQ92478 149 aa10.03□□□□□ -0.8
TUBGCP4-201ENST00000260383 FAM215AQ9Y5M1 114 aa10.03□□□□□ -0.8
TUBGCP4-201ENST00000260383 UBE2E1P51965 193 aa10.02□□□□□ -0.81
TUBGCP4-201ENST00000260383 HES1Q14469 280 aa10.02□□□□□ -0.81
TUBGCP4-201ENST00000260383 ZNF876PQ49A33 203 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms