RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 C20orf202A1L168 122 aa6.86□□□□□ -1.31
CKAP2-201ENST00000258607 ASIPP42127 132 aa6.86□□□□□ -1.31
CKAP2-201ENST00000258607 TMEM190Q8WZ59 177 aa6.86□□□□□ -1.31
CKAP2-201ENST00000258607 OPRPNQ99935 248 aaPredicted RBP6.86□□□□□ -1.31
CKAP2-201ENST00000258607 CITED2Q99967 270 aaPredicted RBP6.86□□□□□ -1.31
CKAP2-201ENST00000258607 MAP1LC3AQ9H492 121 aa6.86□□□□□ -1.31
CKAP2-201ENST00000258607 ZNF492Q9P255 531 aa6.86□□□□□ -1.31
CKAP2-201ENST00000258607 FAM223BA6NKX1 122 aa6.85□□□□□ -1.31
CKAP2-201ENST00000258607 SAP30O75446 220 aa6.85□□□□□ -1.31
CKAP2-201ENST00000258607 CD28P10747 220 aa6.85□□□□□ -1.31
CKAP2-201ENST00000258607 C1orf194Q5T5A4 169 aa6.85□□□□□ -1.31
CKAP2-201ENST00000258607 C16orf54Q6UWD8 224 aa6.85□□□□□ -1.31
CKAP2-201ENST00000258607 FAM223AQ8IWN6 122 aa6.85□□□□□ -1.31
CKAP2-201ENST00000258607 SNRPD3P62318 126 aaKnown RBP6.85□□□□□ -1.31
CKAP2-201ENST00000258607 Q9UF83 564 aa6.85□□□□□ -1.31
CKAP2-201ENST00000258607 NDUFA4O00483 81 aa6.85□□□□□ -1.31
CKAP2-201ENST00000258607 DEFB4AO15263 64 aa6.85□□□□□ -1.31
CKAP2-201ENST00000258607 PCP2Q8IVA1 136 aa6.85□□□□□ -1.31
CKAP2-201ENST00000258607 ESM1Q9NQ30 184 aa6.85□□□□□ -1.31
CKAP2-201ENST00000258607 GOLT1BQ9Y3E0 138 aa6.85□□□□□ -1.31
CKAP2-201ENST00000258607 RPL39P62891 51 aaKnown RBP6.84□□□□□ -1.31
CKAP2-201ENST00000258607 SCGB2A2Q13296 93 aa6.84□□□□□ -1.31
CKAP2-201ENST00000258607 LYPD1Q8N2G4 141 aa6.84□□□□□ -1.31
CKAP2-201ENST00000258607 TMEM191AQ9H0A3 160 aa6.84□□□□□ -1.31
CKAP2-201ENST00000258607 MEGF9Q9H1U4 602 aa6.84□□□□□ -1.31
CKAP2-201ENST00000258607 A0A0U1RRA0 63 aa6.84□□□□□ -1.31
CKAP2-201ENST00000258607 DNAJC9-AS1A6NH13 148 aa6.84□□□□□ -1.31
CKAP2-201ENST00000258607 C2orf70A6NJV1 201 aa6.84□□□□□ -1.31
CKAP2-201ENST00000258607 LINC01587Q99440 93 aa6.84□□□□□ -1.31
CKAP2-201ENST00000258607 VAMP3Q15836 100 aa6.83□□□□□ -1.32
CKAP2-201ENST00000258607 ZNF876PQ49A33 203 aa6.83□□□□□ -1.32
CKAP2-201ENST00000258607 ANKRD39Q53RE8 183 aa6.83□□□□□ -1.32
CKAP2-201ENST00000258607 C9orf139Q6ZV77 190 aa6.83□□□□□ -1.32
CKAP2-201ENST00000258607 MTURNQ8N3F0 131 aa6.83□□□□□ -1.32
CKAP2-201ENST00000258607 M0QZK8 103 aa6.83□□□□□ -1.32
CKAP2-201ENST00000258607 TCF21O43680 179 aa6.83□□□□□ -1.32
CKAP2-201ENST00000258607 ID1P41134 155 aa6.83□□□□□ -1.32
CKAP2-201ENST00000258607 CD300EQ496F6 205 aaPredicted RBP6.83□□□□□ -1.32
CKAP2-201ENST00000258607 CEMP1Q6PRD7 247 aaPredicted RBP6.83□□□□□ -1.32
CKAP2-201ENST00000258607 ATP5L2Q7Z4Y8 100 aa6.83□□□□□ -1.32
CKAP2-201ENST00000258607 IFI27L1Q96BM0 104 aa6.83□□□□□ -1.32
CKAP2-201ENST00000258607 USMG5Q96IX5 58 aa6.83□□□□□ -1.32
CKAP2-201ENST00000258607 TRAV9-1A0A075B6T8 112 aa6.83□□□□□ -1.32
CKAP2-201ENST00000258607 TRAV21A0A0B4J279 112 aa6.83□□□□□ -1.32
CKAP2-201ENST00000258607 Q8N1Y9 231 aa6.83□□□□□ -1.32
CKAP2-201ENST00000258607 MIEN1Q9BRT3 115 aa6.83□□□□□ -1.32
CKAP2-201ENST00000258607 MRPL16Q9NX20 251 aaKnown RBP6.83□□□□□ -1.32
CKAP2-201ENST00000258607 INAFM1C9JVW0 142 aa6.82□□□□□ -1.32
CKAP2-201ENST00000258607 PSMB8P28062 276 aa6.82□□□□□ -1.32
CKAP2-201ENST00000258607 TSPOP30536 169 aa6.82□□□□□ -1.32
CKAP2-201ENST00000258607 ZFAND2AQ8N6M9 145 aa6.82□□□□□ -1.32
CKAP2-201ENST00000258607 Q8N976 141 aa6.82□□□□□ -1.32
CKAP2-201ENST00000258607 OR1N2Q8NGR9 330 aa6.82□□□□□ -1.32
CKAP2-201ENST00000258607 ZNF702PQ9H963 129 aa6.82□□□□□ -1.32
CKAP2-201ENST00000258607 IGLC3P0DOY3 106 aa6.82□□□□□ -1.32
CKAP2-201ENST00000258607 GCSHP23434 173 aa6.82□□□□□ -1.32
CKAP2-201ENST00000258607 HSPB8Q9UJY1 196 aa6.82□□□□□ -1.32
CKAP2-201ENST00000258607 LAMTOR2Q9Y2Q5 125 aa6.82□□□□□ -1.32
CKAP2-201ENST00000258607 A0A096LPF7 62 aa6.82□□□□□ -1.32
CKAP2-201ENST00000258607 S100A7P31151 101 aa6.82□□□□□ -1.32
CKAP2-201ENST00000258607 COX19Q49B96 90 aa6.82□□□□□ -1.32
CKAP2-201ENST00000258607 Q6ZSV7 163 aa6.82□□□□□ -1.32
CKAP2-201ENST00000258607 CSTL1Q9H114 145 aa6.82□□□□□ -1.32
CKAP2-201ENST00000258607 KMT2BQ9UMN6 2715 aaPredicted RBP6.81□□□□□ -1.32
CKAP2-201ENST00000258607 TRAV9-2A0A087WT02 112 aa6.81□□□□□ -1.32
CKAP2-201ENST00000258607 UQCR10Q9UDW1 63 aa6.81□□□□□ -1.32
CKAP2-201ENST00000258607 ADARB2-AS1A8MUL3 147 aa6.81□□□□□ -1.32
CKAP2-201ENST00000258607 NPIPB6E9PJ23 425 aa6.81□□□□□ -1.32
CKAP2-201ENST00000258607 HBDP02042 147 aa6.81□□□□□ -1.32
CKAP2-201ENST00000258607 NPSP0C0P6 89 aa6.81□□□□□ -1.32
CKAP2-201ENST00000258607 NPC2P61916 151 aa6.81□□□□□ -1.32
CKAP2-201ENST00000258607 ZNF747Q9BV97 191 aa6.8□□□□□ -1.32
CKAP2-201ENST00000258607 H7C2G1 150 aa6.8□□□□□ -1.32
CKAP2-201ENST00000258607 TEX43Q6ZNM6 134 aa6.8□□□□□ -1.32
CKAP2-201ENST00000258607 MRPL35Q9NZE8 188 aaKnown RBP6.8□□□□□ -1.32
CKAP2-201ENST00000258607 PTTG1IPP53801 180 aa6.8□□□□□ -1.32
CKAP2-201ENST00000258607 RNF151Q2KHN1 245 aa6.8□□□□□ -1.32
CKAP2-201ENST00000258607 SLC25A34Q6PIV7 304 aa6.8□□□□□ -1.32
CKAP2-201ENST00000258607 RNF185Q96GF1 192 aa6.8□□□□□ -1.32
CKAP2-201ENST00000258607 SCGB3A1Q96QR1 104 aa6.8□□□□□ -1.32
CKAP2-201ENST00000258607 PRSS29PA6NIE9 313 aa6.79□□□□□ -1.32
CKAP2-201ENST00000258607 Q6YL49 198 aa6.79□□□□□ -1.32
CKAP2-201ENST00000258607 MYOZ3Q8TDC0 251 aa6.79□□□□□ -1.32
CKAP2-201ENST00000258607 DSCR9P59020 149 aa6.79□□□□□ -1.32
CKAP2-201ENST00000258607 CT83Q5H943 113 aa6.79□□□□□ -1.32
CKAP2-201ENST00000258607 TMEM170BQ5T4T1 132 aa6.79□□□□□ -1.32
CKAP2-201ENST00000258607 GFRA4Q9GZZ7 299 aa6.79□□□□□ -1.32
CKAP2-201ENST00000258607 A0A096LNJ9 63 aa6.78□□□□□ -1.32
CKAP2-201ENST00000258607 K7ERJ3 54 aa6.78□□□□□ -1.32
CKAP2-201ENST00000258607 IGLV1-40P01703 118 aa6.78□□□□□ -1.32
CKAP2-201ENST00000258607 PF4P02776 101 aa6.78□□□□□ -1.32
CKAP2-201ENST00000258607 LGALS1P09382 135 aaKnown RBP6.78□□□□□ -1.32
CKAP2-201ENST00000258607 IGKV2D-26A0A0A0MRZ7 120 aa6.78□□□□□ -1.32
CKAP2-201ENST00000258607 TRGV1A0A0A0MS02 117 aa6.78□□□□□ -1.32
CKAP2-201ENST00000258607 DUSP14O95147 198 aaKnown RBP6.78□□□□□ -1.32
CKAP2-201ENST00000258607 IGLC6P0CF74 106 aa6.78□□□□□ -1.32
CKAP2-201ENST00000258607 HTN3P15516 51 aa6.78□□□□□ -1.32
CKAP2-201ENST00000258607 GATD1Q8NB37 220 aa6.78□□□□□ -1.32
CKAP2-201ENST00000258607 DCANP1Q8TF63 244 aa6.78□□□□□ -1.32
CKAP2-201ENST00000258607 OVOL1O14753 267 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms