RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 WI2-2373I1.2A0A1W2PRP0 233 aa7.09□□□□□ -1.27
RPA1-201ENST00000254719 MSMBP08118 114 aa7.09□□□□□ -1.27
RPA1-201ENST00000254719 PPIFP30405 207 aaKnown RBP7.09□□□□□ -1.27
RPA1-201ENST00000254719 BOD1L2Q8IYS8 172 aa7.09□□□□□ -1.27
RPA1-201ENST00000254719 COX8AP10176 69 aa7.09□□□□□ -1.27
RPA1-201ENST00000254719 LOXL1Q08397 574 aaPredicted RBP7.09□□□□□ -1.27
RPA1-201ENST00000254719 LY6DQ14210 128 aa7.09□□□□□ -1.27
RPA1-201ENST00000254719 MRPL51Q4U2R6 128 aaKnown RBP7.09□□□□□ -1.27
RPA1-201ENST00000254719 DTX2Q86UW9 622 aa7.09□□□□□ -1.27
RPA1-201ENST00000254719 CLPSL1A2RUU4 121 aa7.09□□□□□ -1.27
RPA1-201ENST00000254719 RRN3P1Q2M238 152 aa7.09□□□□□ -1.27
RPA1-201ENST00000254719 RHPN1-AS1Q9BWJ2 59 aa7.09□□□□□ -1.27
RPA1-201ENST00000254719 EBI3Q14213 229 aa7.08□□□□□ -1.28
RPA1-201ENST00000254719 TMEM95Q3KNT9 176 aa7.08□□□□□ -1.28
RPA1-201ENST00000254719 LINC01356Q8N9X3 169 aa7.08□□□□□ -1.28
RPA1-201ENST00000254719 TMEM158Q8WZ71 300 aa7.08□□□□□ -1.28
RPA1-201ENST00000254719 DUX3Q96PT4 197 aa7.08□□□□□ -1.28
RPA1-201ENST00000254719 MRPL16Q9NX20 251 aaKnown RBP7.08□□□□□ -1.28
RPA1-201ENST00000254719 UBE2L6O14933 153 aa7.08□□□□□ -1.28
RPA1-201ENST00000254719 GAS8-AS1O95177 125 aa7.08□□□□□ -1.28
RPA1-201ENST00000254719 GNLYP22749 145 aa7.08□□□□□ -1.28
RPA1-201ENST00000254719 EVI2AP22794 236 aa7.08□□□□□ -1.28
RPA1-201ENST00000254719 C8orf86Q6ZUL3 223 aa7.08□□□□□ -1.28
RPA1-201ENST00000254719 TMEM219Q86XT9 240 aa7.08□□□□□ -1.28
RPA1-201ENST00000254719 C20orf78Q9BR46 151 aa7.08□□□□□ -1.28
RPA1-201ENST00000254719 POLQO75417 2590 aa7.08□□□□□ -1.28
RPA1-201ENST00000254719 AMTNQ6UX39 209 aa7.08□□□□□ -1.28
RPA1-201ENST00000254719 SIRPDQ9H106 197 aa7.08□□□□□ -1.28
RPA1-201ENST00000254719 LYSTQ99698 3801 aa7.07□□□□□ -1.28
RPA1-201ENST00000254719 TMEM213A2RRL7 107 aa7.07□□□□□ -1.28
RPA1-201ENST00000254719 PLEKHB2Q96CS7 222 aa7.07□□□□□ -1.28
RPA1-201ENST00000254719 C8orf49Q96NF6 230 aa7.07□□□□□ -1.28
RPA1-201ENST00000254719 TAL2Q16559 108 aa7.07□□□□□ -1.28
RPA1-201ENST00000254719 YAE1D1Q9NRH1 226 aa7.07□□□□□ -1.28
RPA1-201ENST00000254719 SIGLEC8Q9NYZ4 499 aa7.07□□□□□ -1.28
RPA1-201ENST00000254719 SONP18583 2426 aaKnown RBP7.07□□□□□ -1.28
RPA1-201ENST00000254719 IL17RELQ6ZVW7 336 aa7.07□□□□□ -1.28
RPA1-201ENST00000254719 SH2D6Q7Z4S9 175 aa7.07□□□□□ -1.28
RPA1-201ENST00000254719 PCP2Q8IVA1 136 aa7.07□□□□□ -1.28
RPA1-201ENST00000254719 ZNF747Q9BV97 191 aa7.07□□□□□ -1.28
RPA1-201ENST00000254719 SETD2Q9BYW2 2564 aaPredicted RBP7.06□□□□□ -1.28
RPA1-201ENST00000254719 CENPVL3A0A0U1RRI6 287 aa7.06□□□□□ -1.28
RPA1-201ENST00000254719 ZNF80P51504 273 aaPredicted RBP7.06□□□□□ -1.28
RPA1-201ENST00000254719 ZC2HC1BQ5TFG8 222 aa7.06□□□□□ -1.28
RPA1-201ENST00000254719 SAMD5Q5TGI4 173 aa7.06□□□□□ -1.28
RPA1-201ENST00000254719 NHP2Q9NX24 153 aaKnown RBP7.06□□□□□ -1.28
RPA1-201ENST00000254719 NACAE9PAV3 2078 aa7.06□□□□□ -1.28
RPA1-201ENST00000254719 CR1P17927 2039 aa7.06□□□□□ -1.28
RPA1-201ENST00000254719 TEX48A0A1B0GUV7 120 aa7.06□□□□□ -1.28
RPA1-201ENST00000254719 HOXA3O43365 443 aaPredicted RBP7.06□□□□□ -1.28
RPA1-201ENST00000254719 PRSS2P07478 247 aa7.06□□□□□ -1.28
RPA1-201ENST00000254719 GATD1Q8NB37 220 aa7.06□□□□□ -1.28
RPA1-201ENST00000254719 TMEM141Q96I45 108 aa7.06□□□□□ -1.28
RPA1-201ENST00000254719 DOPEY1Q5JWR5 2465 aa7.06□□□□□ -1.28
RPA1-201ENST00000254719 IGHV7-81A0A0B4J1V7 117 aa7.06□□□□□ -1.28
RPA1-201ENST00000254719 SMKR1H3BMG3 65 aa7.06□□□□□ -1.28
RPA1-201ENST00000254719 COX8CQ7Z4L0 72 aa7.06□□□□□ -1.28
RPA1-201ENST00000254719 ZNF479Q96JC4 524 aa7.06□□□□□ -1.28
RPA1-201ENST00000254719 ZNF815PA8K554 130 aa7.05□□□□□ -1.28
RPA1-201ENST00000254719 IGKV3-20P01619 116 aa7.05□□□□□ -1.28
RPA1-201ENST00000254719 INSL3P51460 131 aa7.05□□□□□ -1.28
RPA1-201ENST00000254719 SUMO2P61956 95 aaKnown RBP7.05□□□□□ -1.28
RPA1-201ENST00000254719 ERCC8Q13216 396 aa7.05□□□□□ -1.28
RPA1-201ENST00000254719 ANXA2RQ3ZCQ2 193 aa7.05□□□□□ -1.28
RPA1-201ENST00000254719 TMEM101Q96IK0 257 aa7.05□□□□□ -1.28
RPA1-201ENST00000254719 ZFYVE26Q68DK2 2539 aa7.05□□□□□ -1.28
RPA1-201ENST00000254719 ITPR2Q14571 2701 aa7.05□□□□□ -1.28
RPA1-201ENST00000254719 ZNF415Q09FC8 603 aa7.05□□□□□ -1.28
RPA1-201ENST00000254719 LINC01587Q99440 93 aa7.05□□□□□ -1.28
RPA1-201ENST00000254719 LMO4P61968 165 aa7.05□□□□□ -1.28
RPA1-201ENST00000254719 DNAH3Q8TD57 4116 aa7.05□□□□□ -1.28
RPA1-201ENST00000254719 KMT2BQ9UMN6 2715 aaPredicted RBP7.05□□□□□ -1.28
RPA1-201ENST00000254719 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.05□□□□□ -1.28
RPA1-201ENST00000254719 CTSGP08311 255 aa7.05□□□□□ -1.28
RPA1-201ENST00000254719 AZU1P20160 251 aa7.05□□□□□ -1.28
RPA1-201ENST00000254719 DEFB125Q8N687 156 aa7.05□□□□□ -1.28
RPA1-201ENST00000254719 Q8N9W7 124 aa7.05□□□□□ -1.28
RPA1-201ENST00000254719 ZNF256Q9Y2P7 627 aaPredicted RBP7.05□□□□□ -1.28
RPA1-201ENST00000254719 MUC4Q99102 2169 aa7.04□□□□□ -1.28
RPA1-201ENST00000254719 RHODO00212 210 aa7.04□□□□□ -1.28
RPA1-201ENST00000254719 LINC01545Q5VT33 79 aa7.04□□□□□ -1.28
RPA1-201ENST00000254719 BRD3OSQ6XYD6 125 aa7.04□□□□□ -1.28
RPA1-201ENST00000254719 GPHB5Q86YW7 130 aa7.04□□□□□ -1.28
RPA1-201ENST00000254719 GLMPQ8WWB7 406 aa7.04□□□□□ -1.28
RPA1-201ENST00000254719 LINC00527Q9UJ94 153 aa7.04□□□□□ -1.28
RPA1-201ENST00000254719 CRXO43186 299 aaPredicted RBP7.04□□□□□ -1.28
RPA1-201ENST00000254719 ELANEP08246 267 aa7.04□□□□□ -1.28
RPA1-201ENST00000254719 HLA-DMBP28068 263 aa7.04□□□□□ -1.28
RPA1-201ENST00000254719 TRPT1Q86TN4 253 aaKnown RBP7.04□□□□□ -1.28
RPA1-201ENST00000254719 ZNF418Q8TF45 676 aaPredicted RBP7.04□□□□□ -1.28
RPA1-201ENST00000254719 SMIM2Q9BVW6 85 aa7.04□□□□□ -1.28
RPA1-201ENST00000254719 ZFAND3Q9H8U3 227 aa7.04□□□□□ -1.28
RPA1-201ENST00000254719 G3V318 75 aa7.04□□□□□ -1.28
RPA1-201ENST00000254719 GTSCR1Q86UQ5 136 aa7.04□□□□□ -1.28
RPA1-201ENST00000254719 PTPN13Q12923 2485 aa7.04□□□□□ -1.28
RPA1-201ENST00000254719 MED14OSP0DP75 135 aa7.03□□□□□ -1.28
RPA1-201ENST00000254719 ZNF493Q6ZR52 646 aa7.03□□□□□ -1.28
RPA1-201ENST00000254719 IGHV7-4-1A0A0J9YVY3 117 aa7.03□□□□□ -1.28
RPA1-201ENST00000254719 TRBV7-9A0A0J9YWB2 115 aa7.03□□□□□ -1.28
RPA1-201ENST00000254719 A0A1B0GWB2 263 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms