RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 TRAV12-3A0A0B4J271 114 aa18.78■□□□□ 0.6
TMEM55B-201ENST00000250489 TCTEX1D4Q5JR98 221 aa18.78■□□□□ 0.6
TMEM55B-201ENST00000250489 TEX29Q8N6K0 151 aa18.77■□□□□ 0.6
TMEM55B-201ENST00000250489 STPG4Q8N801 248 aa18.77■□□□□ 0.6
TMEM55B-201ENST00000250489 CD5LO43866 347 aa18.77■□□□□ 0.59
TMEM55B-201ENST00000250489 AP1S3Q96PC3 154 aa18.77■□□□□ 0.59
TMEM55B-201ENST00000250489 HINT1P49773 126 aaPredicted RBP18.76■□□□□ 0.59
TMEM55B-201ENST00000250489 LAGE3Q14657 143 aa18.76■□□□□ 0.59
TMEM55B-201ENST00000250489 DPF1Q92782 380 aa18.76■□□□□ 0.59
TMEM55B-201ENST00000250489 IGKV3-20P01619 116 aa18.75■□□□□ 0.59
TMEM55B-201ENST00000250489 RASL10AQ92737 203 aa18.75■□□□□ 0.59
TMEM55B-201ENST00000250489 CHD6Q8TD26 2715 aa18.75■□□□□ 0.59
TMEM55B-201ENST00000250489 LINC01619G3V211 115 aa18.75■□□□□ 0.59
TMEM55B-201ENST00000250489 C4orf3Q8WVX3 66 aa18.75■□□□□ 0.59
TMEM55B-201ENST00000250489 SMIM2Q9BVW6 85 aa18.75■□□□□ 0.59
TMEM55B-201ENST00000250489 DUSP14O95147 198 aaKnown RBP18.73■□□□□ 0.59
TMEM55B-201ENST00000250489 MGPP08493 103 aa18.73■□□□□ 0.59
TMEM55B-201ENST00000250489 CD7P09564 240 aa18.73■□□□□ 0.59
TMEM55B-201ENST00000250489 COX8AP10176 69 aa18.73■□□□□ 0.59
TMEM55B-201ENST00000250489 ANKRD39Q53RE8 183 aa18.73■□□□□ 0.59
TMEM55B-201ENST00000250489 FOXI2Q6ZQN5 318 aa18.73■□□□□ 0.59
TMEM55B-201ENST00000250489 POM121L12Q8N7R1 296 aa18.73■□□□□ 0.59
TMEM55B-201ENST00000250489 OR11H1Q8NG94 326 aa18.73■□□□□ 0.59
TMEM55B-201ENST00000250489 TRAV12-2A0A075B6T6 113 aa18.72■□□□□ 0.59
TMEM55B-201ENST00000250489 SMIM17P0DL12 118 aa18.72■□□□□ 0.59
TMEM55B-201ENST00000250489 C20orf78Q9BR46 151 aa18.72■□□□□ 0.59
TMEM55B-201ENST00000250489 DKK2Q9UBU2 259 aa18.72■□□□□ 0.59
TMEM55B-201ENST00000250489 KIF25-AS1Q9Y6Z4 181 aa18.72■□□□□ 0.59
TMEM55B-201ENST00000250489 KMT2BQ9UMN6 2715 aaPredicted RBP18.72■□□□□ 0.59
TMEM55B-201ENST00000250489 PLA2G2AP14555 144 aa18.72■□□□□ 0.59
TMEM55B-201ENST00000250489 CDKN1BP46527 198 aa18.72■□□□□ 0.59
TMEM55B-201ENST00000250489 SUMO2P61956 95 aaKnown RBP18.72■□□□□ 0.59
TMEM55B-201ENST00000250489 Q6ZSV7 163 aa18.72■□□□□ 0.59
TMEM55B-201ENST00000250489 RPL39LQ96EH5 51 aaKnown RBP18.72■□□□□ 0.59
TMEM55B-201ENST00000250489 TENM4Q6N022 2769 aa18.71■□□□□ 0.59
TMEM55B-201ENST00000250489 OR1N2Q8NGR9 330 aa18.71■□□□□ 0.59
TMEM55B-201ENST00000250489 ITPR3Q14573 2671 aa18.71■□□□□ 0.59
TMEM55B-201ENST00000250489 MUC4Q99102 2169 aa18.7■□□□□ 0.58
TMEM55B-201ENST00000250489 DNAJC9-AS1A6NH13 148 aa18.7■□□□□ 0.58
TMEM55B-201ENST00000250489 ODF1Q14990 250 aa18.7■□□□□ 0.58
TMEM55B-201ENST00000250489 SPINK13Q1W4C9 94 aa18.7■□□□□ 0.58
TMEM55B-201ENST00000250489 LINC00315P59091 139 aa18.7■□□□□ 0.58
TMEM55B-201ENST00000250489 KHDC1LQ5JSQ8 128 aa18.7■□□□□ 0.58
TMEM55B-201ENST00000250489 DUX3Q96PT4 197 aa18.7■□□□□ 0.58
TMEM55B-201ENST00000250489 PEMTQ9UBM1 199 aa18.7■□□□□ 0.58
TMEM55B-201ENST00000250489 ZNF469Q96JG9 3925 aaPredicted RBP18.7■□□□□ 0.58
TMEM55B-201ENST00000250489 NBPF19A0A087WUL8 3843 aa18.69■□□□□ 0.58
TMEM55B-201ENST00000250489 IGHV3-16A0A0C4DH30 117 aa18.69■□□□□ 0.58
TMEM55B-201ENST00000250489 ATP5LO75964 103 aa18.69■□□□□ 0.58
TMEM55B-201ENST00000250489 AMTNQ6UX39 209 aa18.69■□□□□ 0.58
TMEM55B-201ENST00000250489 OR9G4Q8NGQ1 327 aa18.69■□□□□ 0.58
TMEM55B-201ENST00000250489 PRSS1P07477 247 aa18.68■□□□□ 0.58
TMEM55B-201ENST00000250489 C9orf85Q96MD7 179 aa18.68■□□□□ 0.58
TMEM55B-201ENST00000250489 J3QKU1 62 aa18.68■□□□□ 0.58
TMEM55B-201ENST00000250489 ZNF25P17030 456 aaPredicted RBP18.68■□□□□ 0.58
TMEM55B-201ENST00000250489 ZMAT4Q9H898 229 aa18.68■□□□□ 0.58
TMEM55B-201ENST00000250489 G0S2P27469 103 aa18.67■□□□□ 0.58
TMEM55B-201ENST00000250489 KLHL30-AS1Q8NEE0 82 aa18.67■□□□□ 0.58
TMEM55B-201ENST00000250489 NUDT3O95989 172 aa18.66■□□□□ 0.58
TMEM55B-201ENST00000250489 FGF6P10767 208 aa18.66■□□□□ 0.58
TMEM55B-201ENST00000250489 FOXC2Q99958 501 aa18.66■□□□□ 0.58
TMEM55B-201ENST00000250489 IGHV1OR15-1A0A075B7D0 117 aa18.66■□□□□ 0.58
TMEM55B-201ENST00000250489 PPP1R17O96001 155 aa18.66■□□□□ 0.58
TMEM55B-201ENST00000250489 MPV17L2Q567V2 206 aa18.66■□□□□ 0.58
TMEM55B-201ENST00000250489 DLX4Q92988 240 aaPredicted RBP18.66■□□□□ 0.58
TMEM55B-201ENST00000250489 JPT2Q9H910 190 aa18.66■□□□□ 0.58
TMEM55B-201ENST00000250489 MDFICQ9P1T7 246 aa18.66■□□□□ 0.58
TMEM55B-201ENST00000250489 TRAV2A0A0B4J234 112 aa18.65■□□□□ 0.58
TMEM55B-201ENST00000250489 KRTAP1-1Q07627 177 aa18.65■□□□□ 0.58
TMEM55B-201ENST00000250489 ORMDL2Q53FV1 153 aa18.65■□□□□ 0.58
TMEM55B-201ENST00000250489 C2orf91Q6ZV80 131 aa18.65■□□□□ 0.58
TMEM55B-201ENST00000250489 Q8N1Y9 231 aa18.65■□□□□ 0.58
TMEM55B-201ENST00000250489 K7EMI3 77 aa18.64■□□□□ 0.58
TMEM55B-201ENST00000250489 HIST2H2BDQ6DRA6 164 aa18.64■□□□□ 0.58
TMEM55B-201ENST00000250489 ESM1Q9NQ30 184 aa18.64■□□□□ 0.58
TMEM55B-201ENST00000250489 KNCNA6PVL3 124 aa18.64■□□□□ 0.57
TMEM55B-201ENST00000250489 DEFB131AP59861 70 aa18.64■□□□□ 0.57
TMEM55B-201ENST00000250489 TMEM61Q8N0U2 210 aa18.64■□□□□ 0.57
TMEM55B-201ENST00000250489 AGRNO00468 2067 aa18.63■□□□□ 0.57
TMEM55B-201ENST00000250489 TMEM208Q9BTX3 173 aa18.63■□□□□ 0.57
TMEM55B-201ENST00000250489 A8MTW9 85 aa18.62■□□□□ 0.57
TMEM55B-201ENST00000250489 BOD1L2Q8IYS8 172 aa18.62■□□□□ 0.57
TMEM55B-201ENST00000250489 A0A087WWL8 130 aa18.61■□□□□ 0.57
TMEM55B-201ENST00000250489 TCTAP57738 103 aa18.61■□□□□ 0.57
TMEM55B-201ENST00000250489 BVES-AS1Q5T3Y7 98 aa18.61■□□□□ 0.57
TMEM55B-201ENST00000250489 SUMO4Q6EEV6 95 aa18.61■□□□□ 0.57
TMEM55B-201ENST00000250489 IGKCP01834 107 aa18.61■□□□□ 0.57
TMEM55B-201ENST00000250489 HLA-DRB4P13762 266 aa18.61■□□□□ 0.57
TMEM55B-201ENST00000250489 C12orf54Q6X4T0 127 aa18.61■□□□□ 0.57
TMEM55B-201ENST00000250489 TOMM6Q96B49 74 aa18.61■□□□□ 0.57
TMEM55B-201ENST00000250489 HHLA3Q9XRX5 114 aa18.61■□□□□ 0.57
TMEM55B-201ENST00000250489 HLA-DRB4X5D2U9 266 aa18.61■□□□□ 0.57
TMEM55B-201ENST00000250489 SYT8Q8NBV8 401 aa18.6■□□□□ 0.57
TMEM55B-201ENST00000250489 DYNLRB2Q8TF09 96 aa18.6■□□□□ 0.57
TMEM55B-201ENST00000250489 CSTL1Q9H114 145 aa18.6■□□□□ 0.57
TMEM55B-201ENST00000250489 TLN2Q9Y4G6 2542 aa18.59■□□□□ 0.57
TMEM55B-201ENST00000250489 DPM2O94777 84 aa18.59■□□□□ 0.57
TMEM55B-201ENST00000250489 H3BMM0 161 aa18.59■□□□□ 0.57
TMEM55B-201ENST00000250489 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.59■□□□□ 0.57
TMEM55B-201ENST00000250489 DLEU1O43261 78 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms