RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 ATRQ13535 2644 aa17.3■□□□□ 0.36
SYNGR3-201ENST00000248121 TRAV12-3A0A0B4J271 114 aa17.3■□□□□ 0.36
SYNGR3-201ENST00000248121 C7orf71A4D174 169 aa17.3■□□□□ 0.36
SYNGR3-201ENST00000248121 LEPP41159 167 aa17.3■□□□□ 0.36
SYNGR3-201ENST00000248121 AMTNQ6UX39 209 aa17.3■□□□□ 0.36
SYNGR3-201ENST00000248121 PRSS3P2Q8NHM4 247 aa17.3■□□□□ 0.36
SYNGR3-201ENST00000248121 AP5S1Q9NUS5 200 aa17.3■□□□□ 0.36
SYNGR3-201ENST00000248121 MUC4Q99102 2169 aa17.3■□□□□ 0.36
SYNGR3-201ENST00000248121 TRAV12-2A0A075B6T6 113 aa17.29■□□□□ 0.36
SYNGR3-201ENST00000248121 NDUFA11Q86Y39 141 aa17.29■□□□□ 0.36
SYNGR3-201ENST00000248121 TRAV2A0A0B4J234 112 aa17.28■□□□□ 0.36
SYNGR3-201ENST00000248121 S100A4P26447 101 aaKnown RBP17.28■□□□□ 0.36
SYNGR3-201ENST00000248121 CD300EQ496F6 205 aaPredicted RBP17.28■□□□□ 0.36
SYNGR3-201ENST00000248121 DYNLRB2Q8TF09 96 aa17.28■□□□□ 0.36
SYNGR3-201ENST00000248121 MED14OSP0DP75 135 aa17.28■□□□□ 0.36
SYNGR3-201ENST00000248121 GATA1P15976 413 aaPredicted RBP17.28■□□□□ 0.36
SYNGR3-201ENST00000248121 DEFB131AP59861 70 aa17.28■□□□□ 0.36
SYNGR3-201ENST00000248121 TSTD3H0UI37 97 aa17.27■□□□□ 0.36
SYNGR3-201ENST00000248121 DUSP14O95147 198 aaKnown RBP17.27■□□□□ 0.36
SYNGR3-201ENST00000248121 PPBPP02775 128 aa17.27■□□□□ 0.36
SYNGR3-201ENST00000248121 SPINK13Q1W4C9 94 aa17.27■□□□□ 0.36
SYNGR3-201ENST00000248121 FA2HQ7L5A8 372 aa17.27■□□□□ 0.36
SYNGR3-201ENST00000248121 KNCNA6PVL3 124 aa17.27■□□□□ 0.35
SYNGR3-201ENST00000248121 ZNF124Q15973 351 aa17.27■□□□□ 0.35
SYNGR3-201ENST00000248121 SPATA12Q7Z6I5 190 aa17.27■□□□□ 0.35
SYNGR3-201ENST00000248121 SPATA3Q8NHX4 192 aa17.27■□□□□ 0.35
SYNGR3-201ENST00000248121 VWFP04275 2813 aa17.26■□□□□ 0.35
SYNGR3-201ENST00000248121 M0R381 172 aa17.26■□□□□ 0.35
SYNGR3-201ENST00000248121 CDKN1BP46527 198 aa17.26■□□□□ 0.35
SYNGR3-201ENST00000248121 A0A096LNJ9 63 aa17.25■□□□□ 0.35
SYNGR3-201ENST00000248121 LEPROTL1O95214 131 aa17.25■□□□□ 0.35
SYNGR3-201ENST00000248121 FAM159AQ6UWV7 190 aa17.25■□□□□ 0.35
SYNGR3-201ENST00000248121 BTF3P20290 206 aaKnown RBP17.25■□□□□ 0.35
SYNGR3-201ENST00000248121 KRTAP24-1Q3LI83 254 aa17.25■□□□□ 0.35
SYNGR3-201ENST00000248121 PHLDA3Q9Y5J5 127 aa17.25■□□□□ 0.35
SYNGR3-201ENST00000248121 FBN1P35555 2871 aaKnown RBP17.24■□□□□ 0.35
SYNGR3-201ENST00000248121 KIR2DL5BA0A0G2JN68 375 aa17.24■□□□□ 0.35
SYNGR3-201ENST00000248121 KIR2DL5BA0A0G2JPC4 375 aa17.24■□□□□ 0.35
SYNGR3-201ENST00000248121 TNFRSF6BO95407 300 aa17.24■□□□□ 0.35
SYNGR3-201ENST00000248121 KIR2DL5AQ8N109 375 aa17.24■□□□□ 0.35
SYNGR3-201ENST00000248121 TRAV26-2A0A0B4J265 109 aa17.24■□□□□ 0.35
SYNGR3-201ENST00000248121 DDTP30046 118 aa17.24■□□□□ 0.35
SYNGR3-201ENST00000248121 SMIM15Q7Z3B0 74 aa17.24■□□□□ 0.35
SYNGR3-201ENST00000248121 ZNF256Q9Y2P7 627 aaPredicted RBP17.24■□□□□ 0.35
SYNGR3-201ENST00000248121 A8MTW9 85 aa17.23■□□□□ 0.35
SYNGR3-201ENST00000248121 HLA-DRB4P13762 266 aa17.23■□□□□ 0.35
SYNGR3-201ENST00000248121 PRIMA1Q86XR5 153 aa17.23■□□□□ 0.35
SYNGR3-201ENST00000248121 MAP6D1Q9H9H5 199 aa17.23■□□□□ 0.35
SYNGR3-201ENST00000248121 LAMTOR2Q9Y2Q5 125 aa17.23■□□□□ 0.35
SYNGR3-201ENST00000248121 HLA-DRB4X5D2U9 266 aa17.23■□□□□ 0.35
SYNGR3-201ENST00000248121 H3BMM0 161 aa17.22■□□□□ 0.35
SYNGR3-201ENST00000248121 TSPOP30536 169 aa17.22■□□□□ 0.35
SYNGR3-201ENST00000248121 RBMY1BA6NDE4 496 aaKnown RBP17.22■□□□□ 0.35
SYNGR3-201ENST00000248121 RBMY1EA6NEQ0 496 aaKnown RBP17.22■□□□□ 0.35
SYNGR3-201ENST00000248121 NXPH4O95158 308 aa17.22■□□□□ 0.35
SYNGR3-201ENST00000248121 CD7P09564 240 aa17.22■□□□□ 0.35
SYNGR3-201ENST00000248121 RBMY1DP0C7P1 496 aaKnown RBP17.22■□□□□ 0.35
SYNGR3-201ENST00000248121 CITED1Q99966 193 aa17.22■□□□□ 0.35
SYNGR3-201ENST00000248121 TMEM70Q9BUB7 260 aa17.22■□□□□ 0.35
SYNGR3-201ENST00000248121 CRXO43186 299 aaPredicted RBP17.21■□□□□ 0.35
SYNGR3-201ENST00000248121 NRACQ8N912 160 aa17.21■□□□□ 0.35
SYNGR3-201ENST00000248121 SAP30O75446 220 aa17.2■□□□□ 0.34
SYNGR3-201ENST00000248121 FXYD7P58549 80 aa17.2■□□□□ 0.34
SYNGR3-201ENST00000248121 MAP1LC3AQ9H492 121 aa17.2■□□□□ 0.34
SYNGR3-201ENST00000248121 PAM16Q9Y3D7 125 aa17.2■□□□□ 0.34
SYNGR3-201ENST00000248121 RBMY1A1P0DJD3 496 aaKnown RBP17.2■□□□□ 0.34
SYNGR3-201ENST00000248121 RBMY1CP0DJD4 496 aa17.2■□□□□ 0.34
SYNGR3-201ENST00000248121 RBMY1FQ15415 496 aaKnown RBP17.2■□□□□ 0.34
SYNGR3-201ENST00000248121 SPAG8Q99932 426 aaPredicted RBP17.2■□□□□ 0.34
SYNGR3-201ENST00000248121 VAMP8Q9BV40 100 aa17.2■□□□□ 0.34
SYNGR3-201ENST00000248121 SYS1-DBNDD2H3BUS1 97 aa17.19■□□□□ 0.34
SYNGR3-201ENST00000248121 PF4P02776 101 aa17.19■□□□□ 0.34
SYNGR3-201ENST00000248121 C14orf178Q8N769 122 aaPredicted RBP17.19■□□□□ 0.34
SYNGR3-201ENST00000248121 LINC00482Q8N8I6 264 aa17.19■□□□□ 0.34
SYNGR3-201ENST00000248121 OR2K2Q8NGT1 345 aa17.19■□□□□ 0.34
SYNGR3-201ENST00000248121 IGHV3-16A0A0C4DH30 117 aa17.19■□□□□ 0.34
SYNGR3-201ENST00000248121 LINC01546A6NGU7 62 aa17.19■□□□□ 0.34
SYNGR3-201ENST00000248121 ATOH7Q8N100 152 aa17.18■□□□□ 0.34
SYNGR3-201ENST00000248121 Q8N1Y9 231 aa17.18■□□□□ 0.34
SYNGR3-201ENST00000248121 ZNF747Q9BV97 191 aa17.18■□□□□ 0.34
SYNGR3-201ENST00000248121 MDFICQ9P1T7 246 aa17.18■□□□□ 0.34
SYNGR3-201ENST00000248121 IGLV2-18A0A075B6J9 118 aa17.17■□□□□ 0.34
SYNGR3-201ENST00000248121 IGHV1OR15-1A0A075B7D0 117 aa17.17■□□□□ 0.34
SYNGR3-201ENST00000248121 C9orf85Q96MD7 179 aa17.17■□□□□ 0.34
SYNGR3-201ENST00000248121 DPH3P1Q9H4G8 78 aa17.17■□□□□ 0.34
SYNGR3-201ENST00000248121 TRRAPQ9Y4A5 3859 aa17.17■□□□□ 0.34
SYNGR3-201ENST00000248121 OR4C46A6NHA9 309 aa17.17■□□□□ 0.34
SYNGR3-201ENST00000248121 HSPB8Q9UJY1 196 aa17.17■□□□□ 0.34
SYNGR3-201ENST00000248121 TRAV25A0A0B4J276 109 aa17.16■□□□□ 0.34
SYNGR3-201ENST00000248121 MRAP2Q96G30 205 aa17.16■□□□□ 0.34
SYNGR3-201ENST00000248121 C20orf144Q9BQM9 153 aa17.16■□□□□ 0.34
SYNGR3-201ENST00000248121 ODF3L2Q3SX64 289 aa17.16■□□□□ 0.34
SYNGR3-201ENST00000248121 KIF25-AS1Q9Y6Z4 181 aa17.16■□□□□ 0.34
SYNGR3-201ENST00000248121 PRSS47A8MTI9 375 aa17.15■□□□□ 0.34
SYNGR3-201ENST00000248121 MAJINQ3KP22 176 aa17.15■□□□□ 0.34
SYNGR3-201ENST00000248121 DEFB125Q8N687 156 aa17.15■□□□□ 0.34
SYNGR3-201ENST00000248121 JPT2Q9H910 190 aa17.15■□□□□ 0.34
SYNGR3-201ENST00000248121 LINC00315P59091 139 aa17.14■□□□□ 0.33
SYNGR3-201ENST00000248121 AP1S3Q96PC3 154 aa17.14■□□□□ 0.33
SYNGR3-201ENST00000248121 NXT2Q9NPJ8 142 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 1124.7 ms