RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 IGHV4-4A0A075B6R2 117 aa13.75□□□□□ -0.21
TNFSF9-201ENST00000245817 UBE2CO00762 179 aa13.75□□□□□ -0.21
TNFSF9-201ENST00000245817 RNASE3P12724 160 aaKnown RBP13.75□□□□□ -0.21
TNFSF9-201ENST00000245817 OR10J3Q5JRS4 329 aa13.75□□□□□ -0.21
TNFSF9-201ENST00000245817 XCL2Q9UBD3 114 aa13.75□□□□□ -0.21
TNFSF9-201ENST00000245817 M0R381 172 aa13.75□□□□□ -0.21
TNFSF9-201ENST00000245817 HTN1P15515 57 aa13.75□□□□□ -0.21
TNFSF9-201ENST00000245817 IGLL1P15814 213 aa13.75□□□□□ -0.21
TNFSF9-201ENST00000245817 S100A2P29034 98 aa13.75□□□□□ -0.21
TNFSF9-201ENST00000245817 FAM104BQ5XKR9 115 aa13.75□□□□□ -0.21
TNFSF9-201ENST00000245817 Q8N1Y9 231 aa13.75□□□□□ -0.21
TNFSF9-201ENST00000245817 LINC01587Q99440 93 aa13.75□□□□□ -0.21
TNFSF9-201ENST00000245817 WFDC10AQ9H1F0 79 aa13.75□□□□□ -0.21
TNFSF9-201ENST00000245817 SCRT2Q9NQ03 307 aa13.75□□□□□ -0.21
TNFSF9-201ENST00000245817 TRRAPQ9Y4A5 3859 aa13.75□□□□□ -0.21
TNFSF9-201ENST00000245817 Q0VG73 95 aa13.74□□□□□ -0.21
TNFSF9-201ENST00000245817 COA6Q5JTJ3 125 aaKnown RBP13.74□□□□□ -0.21
TNFSF9-201ENST00000245817 AMN1Q8IY45 258 aa13.74□□□□□ -0.21
TNFSF9-201ENST00000245817 ALKBH7Q9BT30 221 aaPredicted RBP13.74□□□□□ -0.21
TNFSF9-201ENST00000245817 TMEM208Q9BTX3 173 aa13.74□□□□□ -0.21
TNFSF9-201ENST00000245817 TP53TG3Q9ULZ0 132 aa13.74□□□□□ -0.21
TNFSF9-201ENST00000245817 IGHV3-16A0A0C4DH30 117 aa13.73□□□□□ -0.21
TNFSF9-201ENST00000245817 RBMY1A1P0DJD3 496 aaKnown RBP13.72□□□□□ -0.21
TNFSF9-201ENST00000245817 RBMY1CP0DJD4 496 aa13.72□□□□□ -0.21
TNFSF9-201ENST00000245817 RPL35AP18077 110 aaKnown RBP13.72□□□□□ -0.21
TNFSF9-201ENST00000245817 RBMY1FQ15415 496 aaKnown RBP13.72□□□□□ -0.21
TNFSF9-201ENST00000245817 MORN3Q6PF18 240 aaPredicted RBP13.72□□□□□ -0.21
TNFSF9-201ENST00000245817 DEFB125Q8N687 156 aa13.72□□□□□ -0.21
TNFSF9-201ENST00000245817 PDZD11Q5EBL8 140 aa13.72□□□□□ -0.21
TNFSF9-201ENST00000245817 TMEM256Q8N2U0 113 aa13.72□□□□□ -0.21
TNFSF9-201ENST00000245817 C1QTNF4Q9BXJ3 329 aa13.72□□□□□ -0.21
TNFSF9-201ENST00000245817 SYT8Q8NBV8 401 aa13.71□□□□□ -0.21
TNFSF9-201ENST00000245817 MDFICQ9P1T7 246 aa13.71□□□□□ -0.21
TNFSF9-201ENST00000245817 SPRY2O43597 315 aa13.7□□□□□ -0.22
TNFSF9-201ENST00000245817 EVI2AP22794 236 aa13.7□□□□□ -0.22
TNFSF9-201ENST00000245817 AKR1D1P51857 326 aa13.7□□□□□ -0.22
TNFSF9-201ENST00000245817 DMRTA1Q5VZB9 504 aa13.7□□□□□ -0.22
TNFSF9-201ENST00000245817 LINC00467Q9BRT7 94 aa13.7□□□□□ -0.22
TNFSF9-201ENST00000245817 CKS2P33552 79 aa13.69□□□□□ -0.22
TNFSF9-201ENST00000245817 MRPL51Q4U2R6 128 aaKnown RBP13.69□□□□□ -0.22
TNFSF9-201ENST00000245817 ORMDL3Q8N138 153 aa13.69□□□□□ -0.22
TNFSF9-201ENST00000245817 HIST3H2BBQ8N257 126 aa13.69□□□□□ -0.22
TNFSF9-201ENST00000245817 C18orf32Q8TCD1 76 aa13.69□□□□□ -0.22
TNFSF9-201ENST00000245817 C9orf85Q96MD7 179 aa13.69□□□□□ -0.22
TNFSF9-201ENST00000245817 AP1S3Q96PC3 154 aa13.69□□□□□ -0.22
TNFSF9-201ENST00000245817 IGHV3OR16-12A0A075B7B8 117 aa13.69□□□□□ -0.22
TNFSF9-201ENST00000245817 RAB4AP20338 218 aa13.69□□□□□ -0.22
TNFSF9-201ENST00000245817 GOLT1BQ9Y3E0 138 aa13.69□□□□□ -0.22
TNFSF9-201ENST00000245817 D6R8Y8 96 aa13.68□□□□□ -0.22
TNFSF9-201ENST00000245817 WIPF1O43516 503 aa13.68□□□□□ -0.22
TNFSF9-201ENST00000245817 PPBPP02775 128 aa13.68□□□□□ -0.22
TNFSF9-201ENST00000245817 SMIM17P0DL12 118 aa13.68□□□□□ -0.22
TNFSF9-201ENST00000245817 ZNF415Q09FC8 603 aa13.68□□□□□ -0.22
TNFSF9-201ENST00000245817 SERF1AO75920 110 aa13.67□□□□□ -0.22
TNFSF9-201ENST00000245817 NXPH4O95158 308 aa13.67□□□□□ -0.22
TNFSF9-201ENST00000245817 IQCJQ1A5X6 159 aa13.67□□□□□ -0.22
TNFSF9-201ENST00000245817 PRELID3AQ96N28 172 aa13.67□□□□□ -0.22
TNFSF9-201ENST00000245817 DPH3P1Q9H4G8 78 aa13.67□□□□□ -0.22
TNFSF9-201ENST00000245817 RNF185Q96GF1 192 aa13.66□□□□□ -0.22
TNFSF9-201ENST00000245817 U3KQK5 164 aa13.66□□□□□ -0.22
TNFSF9-201ENST00000245817 C1orf158Q8N1D5 194 aa13.66□□□□□ -0.22
TNFSF9-201ENST00000245817 C14orf178Q8N769 122 aaPredicted RBP13.66□□□□□ -0.22
TNFSF9-201ENST00000245817 TMEM18Q96B42 140 aa13.66□□□□□ -0.22
TNFSF9-201ENST00000245817 RCHY1Q96PM5 261 aa13.66□□□□□ -0.22
TNFSF9-201ENST00000245817 FABP4P15090 132 aa13.65□□□□□ -0.22
TNFSF9-201ENST00000245817 CSTL1Q9H114 145 aa13.65□□□□□ -0.22
TNFSF9-201ENST00000245817 ZNF876PQ49A33 203 aa13.64□□□□□ -0.23
TNFSF9-201ENST00000245817 SAMD10Q9BYL1 202 aa13.64□□□□□ -0.23
TNFSF9-201ENST00000245817 MGPP08493 103 aa13.63□□□□□ -0.23
TNFSF9-201ENST00000245817 RNASEKQ6P5S7 137 aaKnown RBP13.63□□□□□ -0.23
TNFSF9-201ENST00000245817 SPXQ9BT56 116 aa13.63□□□□□ -0.23
TNFSF9-201ENST00000245817 GSN-AS1Q9NRJ2 163 aa13.63□□□□□ -0.23
TNFSF9-201ENST00000245817 ZMAT5Q9UDW3 170 aaKnown RBP13.63□□□□□ -0.23
TNFSF9-201ENST00000245817 LAMTOR2Q9Y2Q5 125 aa13.63□□□□□ -0.23
TNFSF9-201ENST00000245817 CMYA5Q8N3K9 4069 aa13.63□□□□□ -0.23
TNFSF9-201ENST00000245817 SMKR1H3BMG3 65 aa13.63□□□□□ -0.23
TNFSF9-201ENST00000245817 NUPR1O60356 82 aa13.63□□□□□ -0.23
TNFSF9-201ENST00000245817 NCR2O95944 276 aa13.63□□□□□ -0.23
TNFSF9-201ENST00000245817 PRM2P04554 102 aa13.63□□□□□ -0.23
TNFSF9-201ENST00000245817 GIG44P09565 113 aaPredicted RBP13.63□□□□□ -0.23
TNFSF9-201ENST00000245817 ESDP10768 282 aa13.63□□□□□ -0.23
TNFSF9-201ENST00000245817 NIT1Q86X76 327 aa13.63□□□□□ -0.23
TNFSF9-201ENST00000245817 PRSS3P2Q8NHM4 247 aa13.63□□□□□ -0.23
TNFSF9-201ENST00000245817 MRAP2Q96G30 205 aa13.63□□□□□ -0.23
TNFSF9-201ENST00000245817 HIST1H2BLQ99880 126 aa13.63□□□□□ -0.23
TNFSF9-201ENST00000245817 DNHD1Q96M86 4753 aa13.62□□□□□ -0.23
TNFSF9-201ENST00000245817 M0R2P5 195 aa13.62□□□□□ -0.23
TNFSF9-201ENST00000245817 IFITM10A6NMD0 228 aa13.61□□□□□ -0.23
TNFSF9-201ENST00000245817 HSBP1O75506 76 aa13.61□□□□□ -0.23
TNFSF9-201ENST00000245817 OXLD1Q5BKU9 147 aa13.61□□□□□ -0.23
TNFSF9-201ENST00000245817 LINC00614P0C842 121 aa13.6□□□□□ -0.23
TNFSF9-201ENST00000245817 LINC00310P59036 64 aa13.6□□□□□ -0.23
TNFSF9-201ENST00000245817 OR10D4PQ8NGN7 298 aa13.6□□□□□ -0.23
TNFSF9-201ENST00000245817 CHCHD1Q96BP2 118 aaKnown RBP13.6□□□□□ -0.23
TNFSF9-201ENST00000245817 PACRGQ96M98 296 aaPredicted RBP13.6□□□□□ -0.23
TNFSF9-201ENST00000245817 LOC389332A0A1B0GUA5 103 aa13.59□□□□□ -0.23
TNFSF9-201ENST00000245817 NPYP01303 97 aa13.59□□□□□ -0.23
TNFSF9-201ENST00000245817 FA2HQ7L5A8 372 aa13.59□□□□□ -0.23
TNFSF9-201ENST00000245817 C11orf72Q8NBR9 251 aa13.59□□□□□ -0.23
TNFSF9-201ENST00000245817 TMEM263Q8WUH6 116 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms