RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 PRB4P10163 310 aaPredicted RBP5.92□□□□□ -1.46
CXCR4-201ENST00000241393 UBE2V1Q13404 147 aa5.92□□□□□ -1.46
CXCR4-201ENST00000241393 MPV17L2Q567V2 206 aa5.92□□□□□ -1.46
CXCR4-201ENST00000241393 PAPPA-AS1Q5QFB9 102 aa5.92□□□□□ -1.46
CXCR4-201ENST00000241393 SAMD13Q5VXD3 122 aa5.92□□□□□ -1.46
CXCR4-201ENST00000241393 CLEC2AQ6UVW9 174 aa5.92□□□□□ -1.46
CXCR4-201ENST00000241393 PRSS57Q6UWY2 283 aa5.92□□□□□ -1.46
CXCR4-201ENST00000241393 TMEM219Q86XT9 240 aa5.92□□□□□ -1.46
CXCR4-201ENST00000241393 Q8N8P6 123 aa5.92□□□□□ -1.46
CXCR4-201ENST00000241393 OR9G4Q8NGQ1 327 aa5.92□□□□□ -1.46
CXCR4-201ENST00000241393 TRAV40A0A0B4J280 105 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 IGHV3-66A0A0C4DH42 116 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 A0A0G2JLM5 398 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 IGHV7-4-1A0A0J9YVY3 117 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 H0Y8G0 127 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 SMKR1H3BMG3 65 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 CD5LO43866 347 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 FGF6P10767 208 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 SEC11AP67812 179 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 BOD1L2Q8IYS8 172 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 MRAP2Q96G30 205 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 CCL19Q99731 98 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 SMPXQ9UHP9 88 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 IGLV2-18A0A075B6J9 118 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 TRAV21A0A0B4J279 112 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 MUC21A0A0G2JKD1 596 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 MUC21A0A140T8X8 626 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 SOCS3O14543 225 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 ATP5LO75964 103 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 DSCR9P59020 149 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 MUC21Q5SSG8 566 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 C2orf91Q6ZV80 131 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 APRG1Q8IVJ8 170 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 NEXN-AS1Q8NBZ9 246 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 OR2K2Q8NGT1 345 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 OR10J6PQ8NGY7 276 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 MCRIP2Q9BUT9 160 aaKnown RBP5.91□□□□□ -1.46
CXCR4-201ENST00000241393 TIMM8BQ9Y5J9 83 aaPredicted RBP5.91□□□□□ -1.46
CXCR4-201ENST00000241393 PKD1L2Q7Z442 2459 aa5.91□□□□□ -1.46
CXCR4-201ENST00000241393 DCHS2Q6V1P9 2916 aa5.9□□□□□ -1.46
CXCR4-201ENST00000241393 LRBAP50851 2863 aa5.9□□□□□ -1.46
CXCR4-201ENST00000241393 K7EMI3 77 aa5.9□□□□□ -1.47
CXCR4-201ENST00000241393 TAX1BP3O14907 124 aa5.9□□□□□ -1.47
CXCR4-201ENST00000241393 ZNF207O43670 478 aaKnown RBP5.9□□□□□ -1.47
CXCR4-201ENST00000241393 MSMBP08118 114 aa5.9□□□□□ -1.47
CXCR4-201ENST00000241393 OR4X2Q8NGF9 303 aa5.9□□□□□ -1.47
CXCR4-201ENST00000241393 IGHV3OR16-13A0A075B7E8 117 aa5.89□□□□□ -1.47
CXCR4-201ENST00000241393 IGHV3-49A0A0A0MS15 119 aa5.89□□□□□ -1.47
CXCR4-201ENST00000241393 IGHV3-74A0A0B4J1X5 117 aa5.89□□□□□ -1.47
CXCR4-201ENST00000241393 K7EMT4 169 aa5.89□□□□□ -1.47
CXCR4-201ENST00000241393 IGHV4-38-2P0DP08 117 aa5.89□□□□□ -1.47
CXCR4-201ENST00000241393 HLA-DRB4P13762 266 aa5.89□□□□□ -1.47
CXCR4-201ENST00000241393 LEPP41159 167 aa5.89□□□□□ -1.47
CXCR4-201ENST00000241393 ATP5J2P56134 94 aa5.89□□□□□ -1.47
CXCR4-201ENST00000241393 TMEM97Q5BJF2 176 aa5.89□□□□□ -1.47
CXCR4-201ENST00000241393 SPANXN1Q5VSR9 72 aa5.89□□□□□ -1.47
CXCR4-201ENST00000241393 BRD3OSQ6XYD6 125 aa5.89□□□□□ -1.47
CXCR4-201ENST00000241393 GPHB5Q86YW7 130 aa5.89□□□□□ -1.47
CXCR4-201ENST00000241393 ZFAND2AQ8N6M9 145 aa5.89□□□□□ -1.47
CXCR4-201ENST00000241393 ZNF479Q96JC4 524 aa5.89□□□□□ -1.47
CXCR4-201ENST00000241393 FAM19A4Q96LR4 140 aa5.89□□□□□ -1.47
CXCR4-201ENST00000241393 HLA-DRB4X5D2U9 266 aa5.89□□□□□ -1.47
CXCR4-201ENST00000241393 TACC2O95359 2948 aa5.89□□□□□ -1.47
CXCR4-201ENST00000241393 IGHV3OR16-10A0A075B7F0 116 aa5.88□□□□□ -1.47
CXCR4-201ENST00000241393 TMEM89A2RUT3 159 aa5.88□□□□□ -1.47
CXCR4-201ENST00000241393 B4DSR2 109 aa5.88□□□□□ -1.47
CXCR4-201ENST00000241393 H3BUX3 64 aa5.88□□□□□ -1.47
CXCR4-201ENST00000241393 CCL25O15444 150 aa5.88□□□□□ -1.47
CXCR4-201ENST00000241393 EVI2AP22794 236 aa5.88□□□□□ -1.47
CXCR4-201ENST00000241393 HSD52Q0P140 79 aa5.88□□□□□ -1.47
CXCR4-201ENST00000241393 UNQ9165/PRO28630Q6UXU0 137 aa5.88□□□□□ -1.47
CXCR4-201ENST00000241393 CACNA1BQ00975 2339 aa5.88□□□□□ -1.47
CXCR4-201ENST00000241393 ABCA2Q9BZC7 2435 aa5.88□□□□□ -1.47
CXCR4-201ENST00000241393 IGHV4-30-2A0A087WSY4 118 aa5.88□□□□□ -1.47
CXCR4-201ENST00000241393 A6NDN8 102 aa5.88□□□□□ -1.47
CXCR4-201ENST00000241393 K7EP13 123 aa5.88□□□□□ -1.47
CXCR4-201ENST00000241393 M0R381 172 aa5.88□□□□□ -1.47
CXCR4-201ENST00000241393 PPP1R17O96001 155 aa5.88□□□□□ -1.47
CXCR4-201ENST00000241393 ASIPP42127 132 aa5.88□□□□□ -1.47
CXCR4-201ENST00000241393 LAGE3Q14657 143 aa5.88□□□□□ -1.47
CXCR4-201ENST00000241393 C20orf78Q9BR46 151 aa5.88□□□□□ -1.47
CXCR4-201ENST00000241393 DAZ1Q9NQZ3 744 aaKnown RBP5.88□□□□□ -1.47
CXCR4-201ENST00000241393 HIGD1BQ9P298 99 aa5.88□□□□□ -1.47
CXCR4-201ENST00000241393 PEF1Q9UBV8 284 aaKnown RBP5.88□□□□□ -1.47
CXCR4-201ENST00000241393 TP73-AS1Q9UF72 201 aa5.88□□□□□ -1.47
CXCR4-201ENST00000241393 LINC00527Q9UJ94 153 aa5.88□□□□□ -1.47
CXCR4-201ENST00000241393 ITPR1Q14643 2758 aa5.88□□□□□ -1.47
CXCR4-201ENST00000241393 H3BVH4 76 aa5.87□□□□□ -1.47
CXCR4-201ENST00000241393 DPM2O94777 84 aa5.87□□□□□ -1.47
CXCR4-201ENST00000241393 GAS8-AS1O95177 125 aa5.87□□□□□ -1.47
CXCR4-201ENST00000241393 TRBV12-3P01733 135 aa5.87□□□□□ -1.47
CXCR4-201ENST00000241393 SLC25A16P16260 332 aa5.87□□□□□ -1.47
CXCR4-201ENST00000241393 VAMP3Q15836 100 aa5.87□□□□□ -1.47
CXCR4-201ENST00000241393 PRR9Q5T870 116 aa5.87□□□□□ -1.47
CXCR4-201ENST00000241393 MYOZ3Q8TDC0 251 aa5.87□□□□□ -1.47
CXCR4-201ENST00000241393 TMEM158Q8WZ71 300 aa5.87□□□□□ -1.47
CXCR4-201ENST00000241393 SMIM2Q9BVW6 85 aa5.87□□□□□ -1.47
CXCR4-201ENST00000241393 DPH3P1Q9H4G8 78 aa5.87□□□□□ -1.47
CXCR4-201ENST00000241393 UFC1Q9Y3C8 167 aa5.87□□□□□ -1.47
CXCR4-201ENST00000241393 H3BRM9 83 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms