RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 ZNF56Q15929 161 aa8.17□□□□□ -1.1
TNFAIP3-201ENST00000237289 TSKUQ8WUA8 353 aa8.17□□□□□ -1.1
TNFAIP3-201ENST00000237289 CLUHP3Q96NS8 147 aa8.17□□□□□ -1.1
TNFAIP3-201ENST00000237289 A0A1B0GUT8 65 aa8.16□□□□□ -1.1
TNFAIP3-201ENST00000237289 K7EIL1 84 aa8.16□□□□□ -1.1
TNFAIP3-201ENST00000237289 AZU1P20160 251 aa8.16□□□□□ -1.1
TNFAIP3-201ENST00000237289 FAM3BP58499 235 aaPredicted RBP8.16□□□□□ -1.1
TNFAIP3-201ENST00000237289 TMEM263Q8WUH6 116 aaKnown RBP8.16□□□□□ -1.1
TNFAIP3-201ENST00000237289 KLLNB2CW77 178 aa8.16□□□□□ -1.1
TNFAIP3-201ENST00000237289 COTL1Q14019 142 aa8.16□□□□□ -1.1
TNFAIP3-201ENST00000237289 PACRGQ96M98 296 aaPredicted RBP8.16□□□□□ -1.1
TNFAIP3-201ENST00000237289 IL36BQ9NZH7 164 aa8.16□□□□□ -1.1
TNFAIP3-201ENST00000237289 CARHSP1Q9Y2V2 147 aaKnown RBP8.16□□□□□ -1.1
TNFAIP3-201ENST00000237289 IGHV3-53P01767 116 aa8.15□□□□□ -1.1
TNFAIP3-201ENST00000237289 IGLV2-11P01706 119 aa8.15□□□□□ -1.1
TNFAIP3-201ENST00000237289 FAM231DQ6ZW35 169 aa8.15□□□□□ -1.11
TNFAIP3-201ENST00000237289 H0Y8G0 127 aa8.15□□□□□ -1.11
TNFAIP3-201ENST00000237289 ZNF80P51504 273 aaPredicted RBP8.15□□□□□ -1.11
TNFAIP3-201ENST00000237289 LYZL1Q6UWQ5 148 aa8.15□□□□□ -1.11
TNFAIP3-201ENST00000237289 M0R2P5 195 aa8.14□□□□□ -1.11
TNFAIP3-201ENST00000237289 NHLRC4P0CG21 123 aaPredicted RBP8.14□□□□□ -1.11
TNFAIP3-201ENST00000237289 VAMP3Q15836 100 aa8.14□□□□□ -1.11
TNFAIP3-201ENST00000237289 FAM210BQ96KR6 192 aa8.14□□□□□ -1.11
TNFAIP3-201ENST00000237289 RETNQ9HD89 108 aa8.14□□□□□ -1.11
TNFAIP3-201ENST00000237289 F5H768 121 aa8.14□□□□□ -1.11
TNFAIP3-201ENST00000237289 TYMSP04818 313 aa8.14□□□□□ -1.11
TNFAIP3-201ENST00000237289 RNF183Q96D59 192 aa8.14□□□□□ -1.11
TNFAIP3-201ENST00000237289 TRBV20OR9-2A0A075B6H5 130 aa8.14□□□□□ -1.11
TNFAIP3-201ENST00000237289 AMTNQ6UX39 209 aa8.14□□□□□ -1.11
TNFAIP3-201ENST00000237289 TMEM18Q96B42 140 aa8.14□□□□□ -1.11
TNFAIP3-201ENST00000237289 C19orf73Q9NVV2 129 aa8.14□□□□□ -1.11
TNFAIP3-201ENST00000237289 MRPL16Q9NX20 251 aaKnown RBP8.14□□□□□ -1.11
TNFAIP3-201ENST00000237289 NTF3P20783 257 aa8.13□□□□□ -1.11
TNFAIP3-201ENST00000237289 LINC01559Q495D7 138 aa8.13□□□□□ -1.11
TNFAIP3-201ENST00000237289 COX19Q49B96 90 aa8.13□□□□□ -1.11
TNFAIP3-201ENST00000237289 WDR73Q6P4I2 378 aa8.13□□□□□ -1.11
TNFAIP3-201ENST00000237289 AGRNO00468 2067 aa8.13□□□□□ -1.11
TNFAIP3-201ENST00000237289 K7EN84 100 aa8.13□□□□□ -1.11
TNFAIP3-201ENST00000237289 CT83Q5H943 113 aa8.13□□□□□ -1.11
TNFAIP3-201ENST00000237289 DDTP30046 118 aa8.13□□□□□ -1.11
TNFAIP3-201ENST00000237289 IGHV4-28A0A0C4DH34 117 aa8.13□□□□□ -1.11
TNFAIP3-201ENST00000237289 H7C1H1 209 aa8.13□□□□□ -1.11
TNFAIP3-201ENST00000237289 TRGC2P03986 189 aa8.13□□□□□ -1.11
TNFAIP3-201ENST00000237289 SBSPONQ8IVN8 264 aa8.13□□□□□ -1.11
TNFAIP3-201ENST00000237289 C11orf45Q8TAV5 145 aa8.13□□□□□ -1.11
TNFAIP3-201ENST00000237289 MLST8Q9BVC4 326 aa8.13□□□□□ -1.11
TNFAIP3-201ENST00000237289 TP53TG1Q9Y2A0 90 aa8.13□□□□□ -1.11
TNFAIP3-201ENST00000237289 KRTDAPP60985 99 aa8.12□□□□□ -1.11
TNFAIP3-201ENST00000237289 PRR9Q5T870 116 aa8.12□□□□□ -1.11
TNFAIP3-201ENST00000237289 IL17DQ8TAD2 202 aa8.12□□□□□ -1.11
TNFAIP3-201ENST00000237289 IGHV3-73A0A0B4J1V6 119 aa8.12□□□□□ -1.11
TNFAIP3-201ENST00000237289 A8MWV9 139 aa8.12□□□□□ -1.11
TNFAIP3-201ENST00000237289 HBBP68871 147 aa8.12□□□□□ -1.11
TNFAIP3-201ENST00000237289 A0A1B0GW15 77 aa8.12□□□□□ -1.11
TNFAIP3-201ENST00000237289 M0R143 59 aa8.12□□□□□ -1.11
TNFAIP3-201ENST00000237289 MDFICQ9P1T7 246 aa8.12□□□□□ -1.11
TNFAIP3-201ENST00000237289 PTTG1IPP53801 180 aa8.11□□□□□ -1.11
TNFAIP3-201ENST00000237289 C1orf158Q8N1D5 194 aa8.11□□□□□ -1.11
TNFAIP3-201ENST00000237289 GFRA4Q9GZZ7 299 aa8.11□□□□□ -1.11
TNFAIP3-201ENST00000237289 TP53TG3Q9ULZ0 132 aa8.11□□□□□ -1.11
TNFAIP3-201ENST00000237289 PKIAP61925 76 aa8.11□□□□□ -1.11
TNFAIP3-201ENST00000237289 FAM222AQ5U5X8 452 aa8.11□□□□□ -1.11
TNFAIP3-201ENST00000237289 NOTCH1P46531 2555 aa8.11□□□□□ -1.11
TNFAIP3-201ENST00000237289 FAM231BA6NCW3 169 aa8.11□□□□□ -1.11
TNFAIP3-201ENST00000237289 B9D2Q9BPU9 175 aa8.11□□□□□ -1.11
TNFAIP3-201ENST00000237289 PRADC1Q9BSG0 188 aa8.11□□□□□ -1.11
TNFAIP3-201ENST00000237289 ATP5G1P05496 136 aa8.11□□□□□ -1.11
TNFAIP3-201ENST00000237289 LYRM9A8MSI8 78 aa8.1□□□□□ -1.11
TNFAIP3-201ENST00000237289 A8MZ25 164 aa8.1□□□□□ -1.11
TNFAIP3-201ENST00000237289 RHODO00212 210 aa8.1□□□□□ -1.11
TNFAIP3-201ENST00000237289 C14orf178Q8N769 122 aaPredicted RBP8.1□□□□□ -1.11
TNFAIP3-201ENST00000237289 TRAPPC1Q9Y5R8 145 aa8.1□□□□□ -1.11
TNFAIP3-201ENST00000237289 A0A087WWC5 75 aa8.1□□□□□ -1.11
TNFAIP3-201ENST00000237289 IGKV3D-20A0A0C4DH25 116 aa8.1□□□□□ -1.11
TNFAIP3-201ENST00000237289 A0A087WWL8 130 aa8.1□□□□□ -1.11
TNFAIP3-201ENST00000237289 IGLV2-8P01709 118 aa8.1□□□□□ -1.11
TNFAIP3-201ENST00000237289 ADCYAP1P18509 176 aa8.1□□□□□ -1.11
TNFAIP3-201ENST00000237289 CKS2P33552 79 aa8.1□□□□□ -1.11
TNFAIP3-201ENST00000237289 PAM16Q9Y3D7 125 aa8.1□□□□□ -1.11
TNFAIP3-201ENST00000237289 TNFRSF18Q9Y5U5 241 aa8.1□□□□□ -1.11
TNFAIP3-201ENST00000237289 U3KQK5 164 aa8.1□□□□□ -1.11
TNFAIP3-201ENST00000237289 CRXO43186 299 aaPredicted RBP8.09□□□□□ -1.11
TNFAIP3-201ENST00000237289 ZNF324O75467 553 aaPredicted RBP8.09□□□□□ -1.11
TNFAIP3-201ENST00000237289 PRM2P04554 102 aa8.09□□□□□ -1.11
TNFAIP3-201ENST00000237289 NUP35Q8NFH5 326 aa8.09□□□□□ -1.11
TNFAIP3-201ENST00000237289 A0A0J9YWU9 116 aa8.09□□□□□ -1.11
TNFAIP3-201ENST00000237289 RAB4AP20338 218 aa8.09□□□□□ -1.11
TNFAIP3-201ENST00000237289 CRIP1P50238 77 aa8.09□□□□□ -1.11
TNFAIP3-201ENST00000237289 SLAQ13239 276 aa8.09□□□□□ -1.11
TNFAIP3-201ENST00000237289 IQCJQ1A5X6 159 aa8.09□□□□□ -1.11
TNFAIP3-201ENST00000237289 LINC00322Q6ZN03 302 aaPredicted RBP8.09□□□□□ -1.11
TNFAIP3-201ENST00000237289 OR10AG1Q8NH19 301 aa8.09□□□□□ -1.11
TNFAIP3-201ENST00000237289 V9GYV3 84 aa8.09□□□□□ -1.11
TNFAIP3-201ENST00000237289 IGHV3-16A0A0C4DH30 117 aa8.09□□□□□ -1.11
TNFAIP3-201ENST00000237289 DPH3P1Q9H4G8 78 aa8.09□□□□□ -1.11
TNFAIP3-201ENST00000237289 C19orf71A6NCJ1 209 aa8.09□□□□□ -1.12
TNFAIP3-201ENST00000237289 C20orf202A1L168 122 aa8.08□□□□□ -1.12
TNFAIP3-201ENST00000237289 CXCL1P09341 107 aa8.08□□□□□ -1.12
TNFAIP3-201ENST00000237289 TDRG1Q3Y452 100 aa8.08□□□□□ -1.12
TNFAIP3-201ENST00000237289 KPRPQ5T749 579 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms