RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 COX11Q9Y6N1 276 aa12.11□□□□□ -0.47
UBE3D-201ENST00000237186 K7EQG2 157 aa12.1□□□□□ -0.47
UBE3D-201ENST00000237186 SIVA1O15304 175 aa12.1□□□□□ -0.47
UBE3D-201ENST00000237186 NPSP0C0P6 89 aa12.1□□□□□ -0.47
UBE3D-201ENST00000237186 WFDC3Q8IUB2 231 aa12.1□□□□□ -0.47
UBE3D-201ENST00000237186 RASL10AQ92737 203 aa12.1□□□□□ -0.47
UBE3D-201ENST00000237186 TENM4Q6N022 2769 aa12.1□□□□□ -0.47
UBE3D-201ENST00000237186 Q8N2B8 174 aa12.1□□□□□ -0.47
UBE3D-201ENST00000237186 HHLA3Q9XRX5 114 aa12.1□□□□□ -0.47
UBE3D-201ENST00000237186 A0A0J9YX75 114 aa12.09□□□□□ -0.47
UBE3D-201ENST00000237186 HOXA3O43365 443 aaPredicted RBP12.09□□□□□ -0.47
UBE3D-201ENST00000237186 PPP1R17O96001 155 aa12.09□□□□□ -0.47
UBE3D-201ENST00000237186 PRSS1P07477 247 aa12.09□□□□□ -0.47
UBE3D-201ENST00000237186 SUMO2P61956 95 aaKnown RBP12.09□□□□□ -0.47
UBE3D-201ENST00000237186 SNRPD3P62318 126 aaKnown RBP12.09□□□□□ -0.47
UBE3D-201ENST00000237186 FAM159AQ6UWV7 190 aa12.09□□□□□ -0.47
UBE3D-201ENST00000237186 C14orf178Q8N769 122 aaPredicted RBP12.09□□□□□ -0.47
UBE3D-201ENST00000237186 AP1S3Q96PC3 154 aa12.09□□□□□ -0.47
UBE3D-201ENST00000237186 DOPEY2Q9Y3R5 2298 aa12.08□□□□□ -0.47
UBE3D-201ENST00000237186 IGHV4OR15-8A0A075B7B6 117 aa12.08□□□□□ -0.48
UBE3D-201ENST00000237186 A0A087WW49 117 aa12.08□□□□□ -0.48
UBE3D-201ENST00000237186 ORMDL2Q53FV1 153 aa12.08□□□□□ -0.48
UBE3D-201ENST00000237186 HIST2H2BCQ6DN03 193 aa12.08□□□□□ -0.48
UBE3D-201ENST00000237186 OR9G4Q8NGQ1 327 aa12.08□□□□□ -0.48
UBE3D-201ENST00000237186 SELENOKQ9Y6D0 94 aa12.08□□□□□ -0.48
UBE3D-201ENST00000237186 KIF25-AS1Q9Y6Z4 181 aa12.08□□□□□ -0.48
UBE3D-201ENST00000237186 SYNJ2BPP57105 145 aa12.08□□□□□ -0.48
UBE3D-201ENST00000237186 LINC00315P59091 139 aa12.08□□□□□ -0.48
UBE3D-201ENST00000237186 ZNF124Q15973 351 aa12.08□□□□□ -0.48
UBE3D-201ENST00000237186 SPRY2O43597 315 aa12.07□□□□□ -0.48
UBE3D-201ENST00000237186 ZNF688P0C7X2 276 aa12.07□□□□□ -0.48
UBE3D-201ENST00000237186 HOXD3P31249 432 aaPredicted RBP12.07□□□□□ -0.48
UBE3D-201ENST00000237186 C7orf71A4D174 169 aa12.06□□□□□ -0.48
UBE3D-201ENST00000237186 IGKCP01834 107 aa12.06□□□□□ -0.48
UBE3D-201ENST00000237186 RPL32P62910 135 aaKnown RBP12.06□□□□□ -0.48
UBE3D-201ENST00000237186 Q96MF0 132 aa12.06□□□□□ -0.48
UBE3D-201ENST00000237186 FOXC2Q99958 501 aa12.06□□□□□ -0.48
UBE3D-201ENST00000237186 NBPF19A0A087WUL8 3843 aa12.06□□□□□ -0.48
UBE3D-201ENST00000237186 TAX1BP3O14907 124 aa12.06□□□□□ -0.48
UBE3D-201ENST00000237186 DPM2O94777 84 aa12.06□□□□□ -0.48
UBE3D-201ENST00000237186 TMEM97Q5BJF2 176 aa12.05□□□□□ -0.48
UBE3D-201ENST00000237186 KRTAP1-3Q8IUG1 177 aa12.05□□□□□ -0.48
UBE3D-201ENST00000237186 TOMM6Q96B49 74 aa12.05□□□□□ -0.48
UBE3D-201ENST00000237186 PRRC2AP48634 2157 aaKnown RBP12.05□□□□□ -0.48
UBE3D-201ENST00000237186 APCP25054 2843 aa12.05□□□□□ -0.48
UBE3D-201ENST00000237186 A0A087WX48 190 aa12.04□□□□□ -0.48
UBE3D-201ENST00000237186 TRAV12-1A0A0B4J245 112 aa12.04□□□□□ -0.48
UBE3D-201ENST00000237186 TRAV12-3A0A0B4J271 114 aa12.04□□□□□ -0.48
UBE3D-201ENST00000237186 DUSP14O95147 198 aaKnown RBP12.04□□□□□ -0.48
UBE3D-201ENST00000237186 SEC11AP67812 179 aa12.04□□□□□ -0.48
UBE3D-201ENST00000237186 RPL39LQ96EH5 51 aaKnown RBP12.04□□□□□ -0.48
UBE3D-201ENST00000237186 ZANQ9Y493 2812 aa12.04□□□□□ -0.48
UBE3D-201ENST00000237186 Q6ZVH6 145 aa12.04□□□□□ -0.48
UBE3D-201ENST00000237186 C9orf85Q96MD7 179 aa12.04□□□□□ -0.48
UBE3D-201ENST00000237186 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.03□□□□□ -0.48
UBE3D-201ENST00000237186 CD7P09564 240 aa12.03□□□□□ -0.48
UBE3D-201ENST00000237186 HLA-DRB4P13762 266 aa12.03□□□□□ -0.48
UBE3D-201ENST00000237186 CDKN1BP46527 198 aa12.03□□□□□ -0.48
UBE3D-201ENST00000237186 UBE2V1Q13404 147 aa12.03□□□□□ -0.48
UBE3D-201ENST00000237186 ADAMTSL5Q6ZMM2 481 aa12.03□□□□□ -0.48
UBE3D-201ENST00000237186 FOXI2Q6ZQN5 318 aa12.03□□□□□ -0.48
UBE3D-201ENST00000237186 PCP2Q8IVA1 136 aa12.03□□□□□ -0.48
UBE3D-201ENST00000237186 HLA-DRB4X5D2U9 266 aa12.03□□□□□ -0.48
UBE3D-201ENST00000237186 IGHV3-16A0A0C4DH30 117 aa12.02□□□□□ -0.48
UBE3D-201ENST00000237186 MGPP08493 103 aa12.02□□□□□ -0.48
UBE3D-201ENST00000237186 NMUP48645 174 aa12.02□□□□□ -0.48
UBE3D-201ENST00000237186 HSD52Q0P140 79 aa12.02□□□□□ -0.48
UBE3D-201ENST00000237186 MRPL35Q9NZE8 188 aaKnown RBP12.02□□□□□ -0.48
UBE3D-201ENST00000237186 CR1P17927 2039 aa12.02□□□□□ -0.49
UBE3D-201ENST00000237186 HELZ2Q9BYK8 2649 aaKnown RBP12.02□□□□□ -0.49
UBE3D-201ENST00000237186 TMEM86BQ8N661 226 aa12.02□□□□□ -0.49
UBE3D-201ENST00000237186 WFDC12Q8WWY7 111 aa12.02□□□□□ -0.49
UBE3D-201ENST00000237186 CREBBPQ92793 2442 aa12.01□□□□□ -0.49
UBE3D-201ENST00000237186 TCTEX1D4Q5JR98 221 aa12.01□□□□□ -0.49
UBE3D-201ENST00000237186 AMTNQ6UX39 209 aa12.01□□□□□ -0.49
UBE3D-201ENST00000237186 DUX5Q96PT3 197 aa12.01□□□□□ -0.49
UBE3D-201ENST00000237186 HIGD1BQ9P298 99 aa12.01□□□□□ -0.49
UBE3D-201ENST00000237186 TRAV2A0A0B4J234 112 aa12□□□□□ -0.49
UBE3D-201ENST00000237186 CCL25O15444 150 aa12□□□□□ -0.49
UBE3D-201ENST00000237186 POLR2KP53803 58 aaKnown RBP12□□□□□ -0.49
UBE3D-201ENST00000237186 IGHV1OR15-1A0A075B7D0 117 aa12□□□□□ -0.49
UBE3D-201ENST00000237186 IGKV2D-26A0A0A0MRZ7 120 aa12□□□□□ -0.49
UBE3D-201ENST00000237186 CBY3A6NI87 242 aa12□□□□□ -0.49
UBE3D-201ENST00000237186 LINC01549A6NIU2 74 aa12□□□□□ -0.49
UBE3D-201ENST00000237186 PLNP26678 52 aa12□□□□□ -0.49
UBE3D-201ENST00000237186 ZC2HC1BQ5TFG8 222 aa12□□□□□ -0.49
UBE3D-201ENST00000237186 TEX29Q8N6K0 151 aa12□□□□□ -0.49
UBE3D-201ENST00000237186 SCGB3A1Q96QR1 104 aa12□□□□□ -0.49
UBE3D-201ENST00000237186 CSTL1Q9H114 145 aa12□□□□□ -0.49
UBE3D-201ENST00000237186 TRBV6-5A0A0K0K1A5 114 aa11.99□□□□□ -0.49
UBE3D-201ENST00000237186 A8MTW9 85 aa11.99□□□□□ -0.49
UBE3D-201ENST00000237186 H7C1H1 209 aa11.99□□□□□ -0.49
UBE3D-201ENST00000237186 PTTG1IPP53801 180 aa11.99□□□□□ -0.49
UBE3D-201ENST00000237186 NEXN-AS1Q8NBZ9 246 aa11.99□□□□□ -0.49
UBE3D-201ENST00000237186 TMEM160Q9NX00 188 aa11.99□□□□□ -0.49
UBE3D-201ENST00000237186 MXRA5Q9NR99 2828 aa11.99□□□□□ -0.49
UBE3D-201ENST00000237186 F8VRH5 84 aa11.98□□□□□ -0.49
UBE3D-201ENST00000237186 LINC01619G3V211 115 aa11.98□□□□□ -0.49
UBE3D-201ENST00000237186 TCTAP57738 103 aa11.98□□□□□ -0.49
UBE3D-201ENST00000237186 SUMO4Q6EEV6 95 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms