RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 NDUFA4O00483 81 aa6.9□□□□□ -1.31
SYDE2-201ENST00000234668 DEFB112Q30KQ8 113 aa6.9□□□□□ -1.31
SYDE2-201ENST00000234668 RASL10AQ92737 203 aa6.9□□□□□ -1.31
SYDE2-201ENST00000234668 JMJD1CQ15652 2540 aa6.89□□□□□ -1.31
SYDE2-201ENST00000234668 SOCS3O14543 225 aa6.89□□□□□ -1.31
SYDE2-201ENST00000234668 HTN1P15515 57 aa6.89□□□□□ -1.31
SYDE2-201ENST00000234668 AP1S3Q96PC3 154 aa6.89□□□□□ -1.31
SYDE2-201ENST00000234668 GAGE12BA1L429 117 aa6.89□□□□□ -1.31
SYDE2-201ENST00000234668 GAGE10A6NGK3 116 aa6.89□□□□□ -1.31
SYDE2-201ENST00000234668 PRM2P04554 102 aa6.89□□□□□ -1.31
SYDE2-201ENST00000234668 RBX1P62877 108 aa6.89□□□□□ -1.31
SYDE2-201ENST00000234668 SRSF2Q01130 221 aaKnown RBP6.89□□□□□ -1.31
SYDE2-201ENST00000234668 TRAV21A0A0B4J279 112 aa6.88□□□□□ -1.31
SYDE2-201ENST00000234668 DPM2O94777 84 aa6.88□□□□□ -1.31
SYDE2-201ENST00000234668 TGFAP01135 160 aa6.88□□□□□ -1.31
SYDE2-201ENST00000234668 ASIPP42127 132 aa6.88□□□□□ -1.31
SYDE2-201ENST00000234668 FAM74A4Q5TZK3 123 aa6.88□□□□□ -1.31
SYDE2-201ENST00000234668 OR1N2Q8NGR9 330 aa6.88□□□□□ -1.31
SYDE2-201ENST00000234668 TMEM190Q8WZ59 177 aa6.88□□□□□ -1.31
SYDE2-201ENST00000234668 LINC00477Q96M19 166 aa6.88□□□□□ -1.31
SYDE2-201ENST00000234668 F5H697 171 aa6.88□□□□□ -1.31
SYDE2-201ENST00000234668 SFTPCP11686 197 aa6.88□□□□□ -1.31
SYDE2-201ENST00000234668 RNASE3P12724 160 aaKnown RBP6.88□□□□□ -1.31
SYDE2-201ENST00000234668 PCP4P48539 62 aa6.88□□□□□ -1.31
SYDE2-201ENST00000234668 SRSF1Q07955 248 aaKnown RBP eCLIP6.88□□□□□ -1.31
SYDE2-201ENST00000234668 KLK9Q2XQG4 91 aa6.88□□□□□ -1.31
SYDE2-201ENST00000234668 PEF1Q9UBV8 284 aaKnown RBP6.88□□□□□ -1.31
SYDE2-201ENST00000234668 KLK9Q9UKQ9 250 aa6.88□□□□□ -1.31
SYDE2-201ENST00000234668 TRBV25-1A0A075B6N4 114 aa6.87□□□□□ -1.31
SYDE2-201ENST00000234668 SAP30O75446 220 aa6.87□□□□□ -1.31
SYDE2-201ENST00000234668 PSMG4Q5JS54 123 aa6.87□□□□□ -1.31
SYDE2-201ENST00000234668 SCGB3A1Q96QR1 104 aa6.87□□□□□ -1.31
SYDE2-201ENST00000234668 CST9LQ9H4G1 147 aa6.87□□□□□ -1.31
SYDE2-201ENST00000234668 A0A0G2JLM5 398 aa6.87□□□□□ -1.31
SYDE2-201ENST00000234668 CD7P09564 240 aa6.87□□□□□ -1.31
SYDE2-201ENST00000234668 SUMO2P61956 95 aaKnown RBP6.87□□□□□ -1.31
SYDE2-201ENST00000234668 SMIM2Q9BVW6 85 aa6.87□□□□□ -1.31
SYDE2-201ENST00000234668 DAZ1Q9NQZ3 744 aaKnown RBP6.87□□□□□ -1.31
SYDE2-201ENST00000234668 OVOL1O14753 267 aa6.87□□□□□ -1.31
SYDE2-201ENST00000234668 SYNJ2BPP57105 145 aa6.87□□□□□ -1.31
SYDE2-201ENST00000234668 HSD52Q0P140 79 aa6.87□□□□□ -1.31
SYDE2-201ENST00000234668 MRPL53Q96EL3 112 aaKnown RBP6.87□□□□□ -1.31
SYDE2-201ENST00000234668 NHP2Q9NX24 153 aaKnown RBP6.87□□□□□ -1.31
SYDE2-201ENST00000234668 SMPXQ9UHP9 88 aa6.87□□□□□ -1.31
SYDE2-201ENST00000234668 SEC11AP67812 179 aa6.86□□□□□ -1.31
SYDE2-201ENST00000234668 USMG5Q96IX5 58 aa6.86□□□□□ -1.31
SYDE2-201ENST00000234668 DUX3Q96PT4 197 aa6.86□□□□□ -1.31
SYDE2-201ENST00000234668 CHAC1Q9BUX1 264 aa6.86□□□□□ -1.31
SYDE2-201ENST00000234668 CSTL1Q9H114 145 aa6.86□□□□□ -1.31
SYDE2-201ENST00000234668 ZMAT4Q9H898 229 aa6.86□□□□□ -1.31
SYDE2-201ENST00000234668 BEX4Q9NWD9 120 aaPredicted RBP6.86□□□□□ -1.31
SYDE2-201ENST00000234668 PPP1R14DQ9NXH3 145 aa6.86□□□□□ -1.31
SYDE2-201ENST00000234668 A6NDN8 102 aa6.86□□□□□ -1.31
SYDE2-201ENST00000234668 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.86□□□□□ -1.31
SYDE2-201ENST00000234668 DEFB136Q30KP8 78 aa6.86□□□□□ -1.31
SYDE2-201ENST00000234668 MDFICQ9P1T7 246 aa6.86□□□□□ -1.31
SYDE2-201ENST00000234668 CBY1Q9Y3M2 126 aa6.86□□□□□ -1.31
SYDE2-201ENST00000234668 AKAP9Q99996 3911 aa6.86□□□□□ -1.31
SYDE2-201ENST00000234668 C9orf118A6NHY6 69 aa6.85□□□□□ -1.31
SYDE2-201ENST00000234668 RPL39P62891 51 aaKnown RBP6.85□□□□□ -1.31
SYDE2-201ENST00000234668 C18orf65Q6ZTR6 163 aa6.85□□□□□ -1.31
SYDE2-201ENST00000234668 MTURNQ8N3F0 131 aa6.85□□□□□ -1.31
SYDE2-201ENST00000234668 OR9G4Q8NGQ1 327 aa6.85□□□□□ -1.31
SYDE2-201ENST00000234668 DPH3P1Q9H4G8 78 aa6.85□□□□□ -1.31
SYDE2-201ENST00000234668 B4DSR2 109 aa6.85□□□□□ -1.31
SYDE2-201ENST00000234668 ATP5LO75964 103 aa6.85□□□□□ -1.31
SYDE2-201ENST00000234668 DUSP14O95147 198 aaKnown RBP6.85□□□□□ -1.31
SYDE2-201ENST00000234668 IGLV1-40P01703 118 aa6.85□□□□□ -1.31
SYDE2-201ENST00000234668 SPINK13Q1W4C9 94 aa6.85□□□□□ -1.31
SYDE2-201ENST00000234668 SFTA2Q6UW10 78 aa6.85□□□□□ -1.31
SYDE2-201ENST00000234668 FAM159AQ6UWV7 190 aa6.85□□□□□ -1.31
SYDE2-201ENST00000234668 C2orf66Q6UXQ4 117 aa6.85□□□□□ -1.31
SYDE2-201ENST00000234668 VPS25Q9BRG1 176 aa6.85□□□□□ -1.31
SYDE2-201ENST00000234668 A0A087WX48 190 aa6.84□□□□□ -1.31
SYDE2-201ENST00000234668 RNF223E7ERA6 249 aa6.84□□□□□ -1.31
SYDE2-201ENST00000234668 H3BRM9 83 aa6.84□□□□□ -1.31
SYDE2-201ENST00000234668 KRTAP10-9P60411 292 aa6.84□□□□□ -1.31
SYDE2-201ENST00000234668 OCIAD2Q56VL3 154 aa6.84□□□□□ -1.31
SYDE2-201ENST00000234668 KLHL30-AS1Q8NEE0 82 aa6.84□□□□□ -1.31
SYDE2-201ENST00000234668 ZNF256Q9Y2P7 627 aaPredicted RBP6.84□□□□□ -1.31
SYDE2-201ENST00000234668 IGHV4-4A0A075B6R2 117 aa6.84□□□□□ -1.31
SYDE2-201ENST00000234668 LINC01546A6NGU7 62 aa6.84□□□□□ -1.31
SYDE2-201ENST00000234668 CRIP2P52943 208 aaPredicted RBP6.84□□□□□ -1.31
SYDE2-201ENST00000234668 CHTOPQ9Y3Y2 248 aaKnown RBP6.84□□□□□ -1.31
SYDE2-201ENST00000234668 APCP25054 2843 aa6.84□□□□□ -1.31
SYDE2-201ENST00000234668 IGHV3-73A0A0B4J1V6 119 aa6.84□□□□□ -1.32
SYDE2-201ENST00000234668 PRSS29PA6NIE9 313 aa6.84□□□□□ -1.32
SYDE2-201ENST00000234668 CD300EQ496F6 205 aaPredicted RBP6.84□□□□□ -1.32
SYDE2-201ENST00000234668 DCANP1Q8TF63 244 aa6.84□□□□□ -1.32
SYDE2-201ENST00000234668 OPRPNQ99935 248 aaPredicted RBP6.84□□□□□ -1.32
SYDE2-201ENST00000234668 SPCS1Q9Y6A9 102 aa6.84□□□□□ -1.32
SYDE2-201ENST00000234668 CYSLTR1Q9Y271 337 aa6.83□□□□□ -1.32
SYDE2-201ENST00000234668 NOTCH2Q04721 2471 aa6.83□□□□□ -1.32
SYDE2-201ENST00000234668 SMIM13P0DJ93 91 aa6.83□□□□□ -1.32
SYDE2-201ENST00000234668 MRAP2Q96G30 205 aa6.83□□□□□ -1.32
SYDE2-201ENST00000234668 PSMB8P28062 276 aa6.82□□□□□ -1.32
SYDE2-201ENST00000234668 SAMD5Q5TGI4 173 aa6.82□□□□□ -1.32
SYDE2-201ENST00000234668 BAALCQ8WXS3 180 aa6.82□□□□□ -1.32
SYDE2-201ENST00000234668 HIST1H4GQ99525 98 aa6.82□□□□□ -1.32
SYDE2-201ENST00000234668 LENEPQ9Y5L5 61 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms