RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 NPBQ8NG41 125 aa8.85□□□□□ -0.99
MSH6-201ENST00000234420 DAZ1Q9NQZ3 744 aaKnown RBP8.85□□□□□ -0.99
MSH6-201ENST00000234420 RAI1Q7Z5J4 1906 aaPredicted RBP8.85□□□□□ -0.99
MSH6-201ENST00000234420 YPEL3P61236 119 aaPredicted RBP8.85□□□□□ -0.99
MSH6-201ENST00000234420 Q6ZUT4 128 aa8.85□□□□□ -0.99
MSH6-201ENST00000234420 C20orf197Q8N268 126 aa8.85□□□□□ -0.99
MSH6-201ENST00000234420 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.85□□□□□ -0.99
MSH6-201ENST00000234420 FAM236DA0A1B0GTK5 79 aa8.85□□□□□ -0.99
MSH6-201ENST00000234420 FAM236CP0DP71 79 aa8.85□□□□□ -0.99
MSH6-201ENST00000234420 LRRC37AA6NMS7 1700 aa8.85□□□□□ -0.99
MSH6-201ENST00000234420 IGKV1-27A0A075B6S5 117 aa8.85□□□□□ -0.99
MSH6-201ENST00000234420 LOXL1Q08397 574 aaPredicted RBP8.85□□□□□ -0.99
MSH6-201ENST00000234420 RNF144BQ7Z419 303 aa8.85□□□□□ -0.99
MSH6-201ENST00000234420 TMEM75Q8N9X5 138 aa8.85□□□□□ -0.99
MSH6-201ENST00000234420 OBSL1O75147 1896 aa8.85□□□□□ -0.99
MSH6-201ENST00000234420 COL5A1P20908 1838 aaPredicted RBP8.84□□□□□ -0.99
MSH6-201ENST00000234420 UBE2D1P51668 147 aa8.84□□□□□ -0.99
MSH6-201ENST00000234420 PTH2Q96A98 100 aa8.84□□□□□ -0.99
MSH6-201ENST00000234420 A0A0G2JRQ6 117 aa8.84□□□□□ -0.99
MSH6-201ENST00000234420 DEFB112Q30KQ8 113 aa8.84□□□□□ -0.99
MSH6-201ENST00000234420 DYNAPQ8N1N2 210 aa8.84□□□□□ -0.99
MSH6-201ENST00000234420 PLXNB1O43157 2135 aa8.84□□□□□ -0.99
MSH6-201ENST00000234420 TEX22C9J3V5 150 aa8.84□□□□□ -0.99
MSH6-201ENST00000234420 C5orf64Q2M2E5 130 aa8.84□□□□□ -0.99
MSH6-201ENST00000234420 DEFB135Q30KP9 77 aa8.84□□□□□ -0.99
MSH6-201ENST00000234420 MINOS1Q5TGZ0 78 aa8.84□□□□□ -0.99
MSH6-201ENST00000234420 C10orf105Q8TEF2 133 aa8.84□□□□□ -0.99
MSH6-201ENST00000234420 Q9H8V8 135 aa8.84□□□□□ -0.99
MSH6-201ENST00000234420 MINOS1-NBL1R4GNA1 71 aa8.84□□□□□ -0.99
MSH6-201ENST00000234420 MALRD1Q5VYJ5 2156 aa8.84□□□□□ -0.99
MSH6-201ENST00000234420 IGKV1-12A0A0C4DH73 117 aa8.84□□□□□ -0.99
MSH6-201ENST00000234420 CRYGSP22914 178 aa8.84□□□□□ -0.99
MSH6-201ENST00000234420 CSRP3P50461 194 aa8.84□□□□□ -0.99
MSH6-201ENST00000234420 ZNF492Q9P255 531 aa8.84□□□□□ -0.99
MSH6-201ENST00000234420 ETDCA0A1B0GVM5 59 aa8.84□□□□□ -1
MSH6-201ENST00000234420 TRAV4A0A0B4J268 109 aa8.83□□□□□ -1
MSH6-201ENST00000234420 H0Y9J4 135 aa8.83□□□□□ -1
MSH6-201ENST00000234420 LINC01620Q4KN68 170 aa8.83□□□□□ -1
MSH6-201ENST00000234420 HS3ST6Q96QI5 342 aa8.83□□□□□ -1
MSH6-201ENST00000234420 INAFM1C9JVW0 142 aa8.83□□□□□ -1
MSH6-201ENST00000234420 MT-ATP8P03928 68 aa8.83□□□□□ -1
MSH6-201ENST00000234420 FXYD2P54710 66 aa8.83□□□□□ -1
MSH6-201ENST00000234420 LINC00473A8K010 186 aa8.83□□□□□ -1
MSH6-201ENST00000234420 PLXNB3Q9ULL4 1909 aa8.83□□□□□ -1
MSH6-201ENST00000234420 GRNP28799 593 aaKnown RBP8.83□□□□□ -1
MSH6-201ENST00000234420 TMEM190Q8WZ59 177 aa8.83□□□□□ -1
MSH6-201ENST00000234420 SPTAN1Q13813 2472 aaKnown RBP8.82□□□□□ -1
MSH6-201ENST00000234420 HERVK_113P63121 156 aa8.82□□□□□ -1
MSH6-201ENST00000234420 TMEM61Q8N0U2 210 aa8.82□□□□□ -1
MSH6-201ENST00000234420 A4D1N5 150 aa8.82□□□□□ -1
MSH6-201ENST00000234420 SMIM10L1P0DMW3 83 aa8.82□□□□□ -1
MSH6-201ENST00000234420 SMIM10Q96HG1 83 aa8.82□□□□□ -1
MSH6-201ENST00000234420 SIP14410 1827 aa8.82□□□□□ -1
MSH6-201ENST00000234420 NUP210LQ5VU65 1888 aa8.82□□□□□ -1
MSH6-201ENST00000234420 J3QRE1 110 aa8.82□□□□□ -1
MSH6-201ENST00000234420 NDUFB1O75438 58 aa8.82□□□□□ -1
MSH6-201ENST00000234420 GYPEP15421 78 aa8.82□□□□□ -1
MSH6-201ENST00000234420 Q6ZRM9 215 aa8.82□□□□□ -1
MSH6-201ENST00000234420 CLEC2BQ92478 149 aa8.81□□□□□ -1
MSH6-201ENST00000234420 ZNF747Q9BV97 191 aa8.81□□□□□ -1
MSH6-201ENST00000234420 SPRY2O43597 315 aa8.81□□□□□ -1
MSH6-201ENST00000234420 C3orf22Q8N5N4 141 aa8.81□□□□□ -1
MSH6-201ENST00000234420 SLC25A29Q8N8R3 303 aa8.81□□□□□ -1
MSH6-201ENST00000234420 TEX36Q5VZQ5 186 aa8.81□□□□□ -1
MSH6-201ENST00000234420 WDR90Q96KV7 1748 aa8.81□□□□□ -1
MSH6-201ENST00000234420 UQCRQO14949 82 aa8.81□□□□□ -1
MSH6-201ENST00000234420 CD177Q8N6Q3 437 aa8.81□□□□□ -1
MSH6-201ENST00000234420 ELANEP08246 267 aa8.81□□□□□ -1
MSH6-201ENST00000234420 C10orf91Q5T1B1 145 aa8.81□□□□□ -1
MSH6-201ENST00000234420 NCR3O14931 201 aa8.8□□□□□ -1
MSH6-201ENST00000234420 C20orf78Q9BR46 151 aa8.8□□□□□ -1
MSH6-201ENST00000234420 CLUHP3Q96NS8 147 aa8.8□□□□□ -1
MSH6-201ENST00000234420 ARHGAP32A7KAX9 2087 aa8.8□□□□□ -1
MSH6-201ENST00000234420 RBAKDNA6NC62 111 aa8.8□□□□□ -1
MSH6-201ENST00000234420 A6NED7 52 aa8.8□□□□□ -1
MSH6-201ENST00000234420 CXCL5P42830 114 aa8.8□□□□□ -1
MSH6-201ENST00000234420 ARTNQ5T4W7 220 aa8.8□□□□□ -1
MSH6-201ENST00000234420 C5orf38Q86SI9 138 aa8.8□□□□□ -1
MSH6-201ENST00000234420 C20orf173Q96LM9 149 aa8.8□□□□□ -1
MSH6-201ENST00000234420 PRR25Q96S07 402 aa8.8□□□□□ -1
MSH6-201ENST00000234420 CREBBPQ92793 2442 aa8.79□□□□□ -1
MSH6-201ENST00000234420 SLX1AQ9BQ83 275 aa8.79□□□□□ -1
MSH6-201ENST00000234420 SHANK2-AS3Q9BTD1 123 aa8.79□□□□□ -1
MSH6-201ENST00000234420 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.79□□□□□ -1
MSH6-201ENST00000234420 IGKV2-29A2NJV5 120 aaPredicted RBP8.79□□□□□ -1
MSH6-201ENST00000234420 EIF4EBP2Q13542 120 aaPredicted RBP8.79□□□□□ -1
MSH6-201ENST00000234420 LGALS9O00182 355 aa8.79□□□□□ -1
MSH6-201ENST00000234420 ZNF726P1Q15940 193 aa8.79□□□□□ -1
MSH6-201ENST00000234420 DAND5Q8N907 189 aa8.79□□□□□ -1
MSH6-201ENST00000234420 H0YJW9 148 aa8.79□□□□□ -1
MSH6-201ENST00000234420 IGKV4-1P06312 121 aa8.79□□□□□ -1
MSH6-201ENST00000234420 GATA3P23771 443 aa8.79□□□□□ -1
MSH6-201ENST00000234420 GAFA1Q96PS6 74 aa8.79□□□□□ -1
MSH6-201ENST00000234420 UPK3BQ9BT76 320 aa8.79□□□□□ -1
MSH6-201ENST00000234420 M0QXV9 152 aa8.79□□□□□ -1
MSH6-201ENST00000234420 LINC00114Q6XXX2 140 aa8.79□□□□□ -1
MSH6-201ENST00000234420 SDIM1Q6ZPB5 146 aa8.79□□□□□ -1
MSH6-201ENST00000234420 LINC00173Q6ZV60 143 aa8.79□□□□□ -1
MSH6-201ENST00000234420 PRSS33Q8NF86 280 aa8.79□□□□□ -1
MSH6-201ENST00000234420 CAMK2N2Q96S95 79 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms