RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 CTSGP08311 255 aa11.23□□□□□ -0.61
PRDM4-201ENST00000228437 LINC01559Q495D7 138 aa11.23□□□□□ -0.61
PRDM4-201ENST00000228437 C15orf53Q8NAA6 179 aa11.23□□□□□ -0.61
PRDM4-201ENST00000228437 TRAV8-3A0A0A6YYJ7 113 aa11.23□□□□□ -0.61
PRDM4-201ENST00000228437 ZNF883P0CG24 379 aa11.23□□□□□ -0.61
PRDM4-201ENST00000228437 U3KQK5 164 aa11.23□□□□□ -0.61
PRDM4-201ENST00000228437 NUP37Q8NFH4 326 aa11.22□□□□□ -0.61
PRDM4-201ENST00000228437 SETD2Q9BYW2 2564 aaPredicted RBP11.22□□□□□ -0.61
PRDM4-201ENST00000228437 A4D1N5 150 aa11.22□□□□□ -0.61
PRDM4-201ENST00000228437 C11orf86A6NJI1 115 aa11.22□□□□□ -0.61
PRDM4-201ENST00000228437 VMO1Q7Z5L0 202 aa11.22□□□□□ -0.61
PRDM4-201ENST00000228437 FANCD2OSQ96PS1 177 aa11.22□□□□□ -0.61
PRDM4-201ENST00000228437 GAGE12JA6NER3 117 aa11.22□□□□□ -0.61
PRDM4-201ENST00000228437 GAGE7O76087 117 aa11.22□□□□□ -0.61
PRDM4-201ENST00000228437 GAGE12FP0CL80 117 aa11.22□□□□□ -0.61
PRDM4-201ENST00000228437 GAGE12GP0CL81 117 aa11.22□□□□□ -0.61
PRDM4-201ENST00000228437 GAGE12IP0CL82 117 aa11.22□□□□□ -0.61
PRDM4-201ENST00000228437 GAGE4Q13068 117 aa11.22□□□□□ -0.61
PRDM4-201ENST00000228437 TCTEX1D4Q5JR98 221 aa11.22□□□□□ -0.61
PRDM4-201ENST00000228437 OPRPNQ99935 248 aaPredicted RBP11.22□□□□□ -0.61
PRDM4-201ENST00000228437 VCX2Q9H322 139 aa11.22□□□□□ -0.61
PRDM4-201ENST00000228437 MYO9AB2RTY4 2548 aa11.22□□□□□ -0.61
PRDM4-201ENST00000228437 LINC01548A6NM66 108 aa11.21□□□□□ -0.61
PRDM4-201ENST00000228437 NFE4Q86UQ8 179 aa11.21□□□□□ -0.61
PRDM4-201ENST00000228437 C10orf126Q8N4M7 172 aa11.21□□□□□ -0.61
PRDM4-201ENST00000228437 ZNF625Q96I27 306 aaPredicted RBP11.21□□□□□ -0.61
PRDM4-201ENST00000228437 C11orf21Q9P2W6 132 aa11.21□□□□□ -0.61
PRDM4-201ENST00000228437 IGLV1-47P01700 117 aa11.21□□□□□ -0.61
PRDM4-201ENST00000228437 KLRB1Q12918 225 aa11.21□□□□□ -0.61
PRDM4-201ENST00000228437 BAALCQ8WXS3 180 aa11.21□□□□□ -0.61
PRDM4-201ENST00000228437 SHISA9B4DS77 424 aa11.21□□□□□ -0.62
PRDM4-201ENST00000228437 ATP6V0E1O15342 81 aa11.21□□□□□ -0.62
PRDM4-201ENST00000228437 JPT2Q9H910 190 aa11.21□□□□□ -0.62
PRDM4-201ENST00000228437 HERV-K104P63124 156 aa11.2□□□□□ -0.62
PRDM4-201ENST00000228437 IFITM1P13164 125 aa11.2□□□□□ -0.62
PRDM4-201ENST00000228437 PRR30Q53SZ7 412 aaPredicted RBP11.2□□□□□ -0.62
PRDM4-201ENST00000228437 LINC00574Q9H8X3 128 aa11.2□□□□□ -0.62
PRDM4-201ENST00000228437 J3QQQ9 107 aa11.2□□□□□ -0.62
PRDM4-201ENST00000228437 RS1O15537 224 aa11.2□□□□□ -0.62
PRDM4-201ENST00000228437 FCN3O75636 299 aa11.2□□□□□ -0.62
PRDM4-201ENST00000228437 SONP18583 2426 aaKnown RBP11.2□□□□□ -0.62
PRDM4-201ENST00000228437 PHLDA1Q8WV24 401 aaPredicted RBP11.19□□□□□ -0.62
PRDM4-201ENST00000228437 SDHAF1A6NFY7 115 aa11.19□□□□□ -0.62
PRDM4-201ENST00000228437 IGLV11-55A0A075B6I3 123 aa11.18□□□□□ -0.62
PRDM4-201ENST00000228437 CCL21O00585 134 aa11.18□□□□□ -0.62
PRDM4-201ENST00000228437 PAX8Q06710 450 aa11.18□□□□□ -0.62
PRDM4-201ENST00000228437 PMVKQ15126 192 aa11.18□□□□□ -0.62
PRDM4-201ENST00000228437 MEIG1Q5JSS6 88 aa11.18□□□□□ -0.62
PRDM4-201ENST00000228437 CFAP126Q5VTH2 177 aa11.18□□□□□ -0.62
PRDM4-201ENST00000228437 MORN3Q6PF18 240 aaPredicted RBP11.18□□□□□ -0.62
PRDM4-201ENST00000228437 SMAD5-AS1Q9Y6J3 95 aa11.18□□□□□ -0.62
PRDM4-201ENST00000228437 ZNF876PQ49A33 203 aa11.18□□□□□ -0.62
PRDM4-201ENST00000228437 PAPPA-AS1Q5QFB9 102 aa11.18□□□□□ -0.62
PRDM4-201ENST00000228437 NDUFA11Q86Y39 141 aa11.18□□□□□ -0.62
PRDM4-201ENST00000228437 LOC400499M0QZD8 3231 aa11.17□□□□□ -0.62
PRDM4-201ENST00000228437 TNRC6BQ9UPQ9 1833 aaKnown RBP11.17□□□□□ -0.62
PRDM4-201ENST00000228437 TRBV7-3A0A075B6L6 115 aa11.17□□□□□ -0.62
PRDM4-201ENST00000228437 KHDC1LQ5JSQ8 128 aa11.17□□□□□ -0.62
PRDM4-201ENST00000228437 ATXN8Q156A1 80 aa11.17□□□□□ -0.62
PRDM4-201ENST00000228437 Q6ZS46 218 aa11.17□□□□□ -0.62
PRDM4-201ENST00000228437 ZFYVE26Q68DK2 2539 aa11.17□□□□□ -0.62
PRDM4-201ENST00000228437 TRBV6-1A0A0K0K1D8 114 aa11.17□□□□□ -0.62
PRDM4-201ENST00000228437 THBDP07204 575 aa11.17□□□□□ -0.62
PRDM4-201ENST00000228437 ASPMQ8IZT6 3477 aa11.17□□□□□ -0.62
PRDM4-201ENST00000228437 KALRNO60229 2985 aa11.16□□□□□ -0.62
PRDM4-201ENST00000228437 CFC1BP0CG36 223 aa11.16□□□□□ -0.62
PRDM4-201ENST00000228437 CFC1P0CG37 223 aa11.16□□□□□ -0.62
PRDM4-201ENST00000228437 RNF5Q99942 180 aa11.16□□□□□ -0.62
PRDM4-201ENST00000228437 BUB3O43684 328 aa11.16□□□□□ -0.62
PRDM4-201ENST00000228437 CD28P10747 220 aa11.16□□□□□ -0.62
PRDM4-201ENST00000228437 TRAV12-2A0A075B6T6 113 aa11.16□□□□□ -0.62
PRDM4-201ENST00000228437 TEX49A0A1B0GTD5 131 aa11.16□□□□□ -0.62
PRDM4-201ENST00000228437 RBAKDNA6NC62 111 aa11.16□□□□□ -0.62
PRDM4-201ENST00000228437 H3BMM0 161 aa11.16□□□□□ -0.62
PRDM4-201ENST00000228437 MUSTN1Q8IVN3 82 aa11.16□□□□□ -0.62
PRDM4-201ENST00000228437 UBE2WQ96B02 151 aa11.16□□□□□ -0.62
PRDM4-201ENST00000228437 DUX3Q96PT4 197 aa11.16□□□□□ -0.62
PRDM4-201ENST00000228437 IGKV3OR2-268A0A0C4DH90 116 aa11.15□□□□□ -0.62
PRDM4-201ENST00000228437 TRAV4A0A0B4J268 109 aa11.15□□□□□ -0.62
PRDM4-201ENST00000228437 KNCNA6PVL3 124 aa11.15□□□□□ -0.62
PRDM4-201ENST00000228437 M0R2P5 195 aa11.15□□□□□ -0.62
PRDM4-201ENST00000228437 VCYO14598 125 aa11.15□□□□□ -0.62
PRDM4-201ENST00000228437 MRGPRG-AS1Q2M3A8 158 aa11.15□□□□□ -0.62
PRDM4-201ENST00000228437 GATD1Q8NB37 220 aa11.15□□□□□ -0.62
PRDM4-201ENST00000228437 CCDC179H3BU77 68 aa11.14□□□□□ -0.63
PRDM4-201ENST00000228437 CRYGBP07316 175 aa11.14□□□□□ -0.63
PRDM4-201ENST00000228437 GRNP28799 593 aaKnown RBP11.14□□□□□ -0.63
PRDM4-201ENST00000228437 DMXL2Q8TDJ6 3036 aa11.14□□□□□ -0.63
PRDM4-201ENST00000228437 TACC2O95359 2948 aa11.14□□□□□ -0.63
PRDM4-201ENST00000228437 PPP1R17O96001 155 aa11.14□□□□□ -0.63
PRDM4-201ENST00000228437 CRIP2P52943 208 aaPredicted RBP11.14□□□□□ -0.63
PRDM4-201ENST00000228437 CDIP1Q9H305 208 aa11.14□□□□□ -0.63
PRDM4-201ENST00000228437 BRD3OSQ6XYD6 125 aa11.14□□□□□ -0.63
PRDM4-201ENST00000228437 DAND5Q8N907 189 aa11.14□□□□□ -0.63
PRDM4-201ENST00000228437 RASL10AQ92737 203 aa11.14□□□□□ -0.63
PRDM4-201ENST00000228437 NRACQ8N912 160 aa11.13□□□□□ -0.63
PRDM4-201ENST00000228437 KAAG1Q9UBP8 84 aa11.13□□□□□ -0.63
PRDM4-201ENST00000228437 KLK9Q9UKQ9 250 aa11.13□□□□□ -0.63
PRDM4-201ENST00000228437 IGHV3OR16-12A0A075B7B8 117 aa11.13□□□□□ -0.63
PRDM4-201ENST00000228437 A0A0J9YXV3 536 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms