RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 M0R381 172 aa10.76□□□□□ -0.69
SF1-201ENST00000227503 RPL7P18124 248 aaKnown RBP10.76□□□□□ -0.69
SF1-201ENST00000227503 MFAP4P55083 255 aa10.76□□□□□ -0.69
SF1-201ENST00000227503 BAALCQ8WXS3 180 aa10.76□□□□□ -0.69
SF1-201ENST00000227503 ANKHD1Q8IWZ3 2542 aaKnown RBP10.76□□□□□ -0.69
SF1-201ENST00000227503 IGHV7-4-1A0A0J9YVY3 117 aa10.75□□□□□ -0.69
SF1-201ENST00000227503 NEXN-AS1Q8NBZ9 246 aa10.75□□□□□ -0.69
SF1-201ENST00000227503 SMIM2Q9BVW6 85 aa10.75□□□□□ -0.69
SF1-201ENST00000227503 CELSR1Q9NYQ6 3014 aa10.75□□□□□ -0.69
SF1-201ENST00000227503 SPTAN1Q13813 2472 aaKnown RBP10.75□□□□□ -0.69
SF1-201ENST00000227503 M0R1W7 72 aa10.75□□□□□ -0.69
SF1-201ENST00000227503 IGF1P05019 195 aa10.75□□□□□ -0.69
SF1-201ENST00000227503 CFC1BP0CG36 223 aa10.75□□□□□ -0.69
SF1-201ENST00000227503 CFC1P0CG37 223 aa10.75□□□□□ -0.69
SF1-201ENST00000227503 LINC01559Q495D7 138 aa10.75□□□□□ -0.69
SF1-201ENST00000227503 TRBV7-9A0A0J9YWB2 115 aa10.75□□□□□ -0.69
SF1-201ENST00000227503 CDSNQ15517 529 aa10.75□□□□□ -0.69
SF1-201ENST00000227503 COX8CQ7Z4L0 72 aa10.75□□□□□ -0.69
SF1-201ENST00000227503 AGPAT4-IT1Q9H0P7 198 aa10.75□□□□□ -0.69
SF1-201ENST00000227503 HIF1ANQ9NWT6 349 aa10.75□□□□□ -0.69
SF1-201ENST00000227503 A6NJY4 79 aa10.74□□□□□ -0.69
SF1-201ENST00000227503 TSPEAR-AS2P59090 65 aa10.74□□□□□ -0.69
SF1-201ENST00000227503 CITED1Q99966 193 aa10.74□□□□□ -0.69
SF1-201ENST00000227503 DEFB1P60022 68 aa10.74□□□□□ -0.69
SF1-201ENST00000227503 C2orf66Q6UXQ4 117 aa10.74□□□□□ -0.69
SF1-201ENST00000227503 C21orf62Q9NYP8 219 aa10.74□□□□□ -0.69
SF1-201ENST00000227503 ELANEP08246 267 aa10.73□□□□□ -0.69
SF1-201ENST00000227503 FOXC1Q12948 553 aa10.73□□□□□ -0.69
SF1-201ENST00000227503 Q8N6K4 173 aa10.73□□□□□ -0.69
SF1-201ENST00000227503 MSRB2Q9Y3D2 182 aa10.73□□□□□ -0.69
SF1-201ENST00000227503 C11orf86A6NJI1 115 aa10.73□□□□□ -0.69
SF1-201ENST00000227503 DUSP14O95147 198 aaKnown RBP10.73□□□□□ -0.69
SF1-201ENST00000227503 MGPP08493 103 aa10.73□□□□□ -0.69
SF1-201ENST00000227503 COX6B1P14854 86 aa10.73□□□□□ -0.69
SF1-201ENST00000227503 NDUFV3P56181 108 aaKnown RBP10.73□□□□□ -0.69
SF1-201ENST00000227503 C14orf178Q8N769 122 aaPredicted RBP10.73□□□□□ -0.69
SF1-201ENST00000227503 TIMD4Q96H15 378 aa10.73□□□□□ -0.69
SF1-201ENST00000227503 BEX4Q9NWD9 120 aaPredicted RBP10.73□□□□□ -0.69
SF1-201ENST00000227503 SLC25A20O43772 301 aa10.72□□□□□ -0.69
SF1-201ENST00000227503 GAGE2BQ13066 116 aa10.72□□□□□ -0.69
SF1-201ENST00000227503 GAGE2EQ4V326 116 aa10.72□□□□□ -0.69
SF1-201ENST00000227503 GAGE2DQ9UEU5 116 aa10.72□□□□□ -0.69
SF1-201ENST00000227503 AKAP6Q13023 2319 aa10.72□□□□□ -0.69
SF1-201ENST00000227503 MAP1AP78559 2803 aaPredicted RBP10.72□□□□□ -0.69
SF1-201ENST00000227503 PRR9Q5T870 116 aa10.72□□□□□ -0.69
SF1-201ENST00000227503 TRAV12-1A0A0B4J245 112 aa10.71□□□□□ -0.69
SF1-201ENST00000227503 A0A0J9YY99 117 aa10.71□□□□□ -0.69
SF1-201ENST00000227503 CTSGP08311 255 aa10.71□□□□□ -0.69
SF1-201ENST00000227503 C11orf71Q6IPW1 123 aa10.71□□□□□ -0.69
SF1-201ENST00000227503 NTN5Q8WTR8 489 aaPredicted RBP10.71□□□□□ -0.69
SF1-201ENST00000227503 IGHV3-64A0A075B6Q5 118 aa10.71□□□□□ -0.69
SF1-201ENST00000227503 CCL21O00585 134 aa10.71□□□□□ -0.69
SF1-201ENST00000227503 RPL32P62910 135 aaKnown RBP10.71□□□□□ -0.69
SF1-201ENST00000227503 FAM159AQ6UWV7 190 aa10.71□□□□□ -0.69
SF1-201ENST00000227503 VMO1Q7Z5L0 202 aa10.71□□□□□ -0.69
SF1-201ENST00000227503 EIF4EBP3O60516 100 aaPredicted RBP10.71□□□□□ -0.7
SF1-201ENST00000227503 SNCGO76070 127 aa10.71□□□□□ -0.7
SF1-201ENST00000227503 ARL3P36405 182 aa10.71□□□□□ -0.7
SF1-201ENST00000227503 SUMO2P61956 95 aaKnown RBP10.71□□□□□ -0.7
SF1-201ENST00000227503 TOMM6Q96B49 74 aa10.71□□□□□ -0.7
SF1-201ENST00000227503 LINC01619G3V211 115 aa10.7□□□□□ -0.7
SF1-201ENST00000227503 IGHV4-39P01824 125 aa10.7□□□□□ -0.7
SF1-201ENST00000227503 EBI3Q14213 229 aa10.7□□□□□ -0.7
SF1-201ENST00000227503 TEX49A0A1B0GTD5 131 aa10.7□□□□□ -0.7
SF1-201ENST00000227503 RHODO00212 210 aa10.7□□□□□ -0.7
SF1-201ENST00000227503 CRYGDP07320 174 aa10.7□□□□□ -0.7
SF1-201ENST00000227503 ADORA2A-AS1P86434 159 aa10.7□□□□□ -0.7
SF1-201ENST00000227503 HRNRQ86YZ3 2850 aaPredicted RBP10.7□□□□□ -0.7
SF1-201ENST00000227503 MUC4Q99102 2169 aa10.69□□□□□ -0.7
SF1-201ENST00000227503 RPL39P62891 51 aaKnown RBP10.69□□□□□ -0.7
SF1-201ENST00000227503 GAGE12JA6NER3 117 aa10.69□□□□□ -0.7
SF1-201ENST00000227503 GAGE7O76087 117 aa10.69□□□□□ -0.7
SF1-201ENST00000227503 GAGE12FP0CL80 117 aa10.69□□□□□ -0.7
SF1-201ENST00000227503 GAGE12GP0CL81 117 aa10.69□□□□□ -0.7
SF1-201ENST00000227503 GAGE12IP0CL82 117 aa10.69□□□□□ -0.7
SF1-201ENST00000227503 GAGE4Q13068 117 aa10.69□□□□□ -0.7
SF1-201ENST00000227503 TTC32Q5I0X7 151 aa10.69□□□□□ -0.7
SF1-201ENST00000227503 TMEM170BQ5T4T1 132 aa10.69□□□□□ -0.7
SF1-201ENST00000227503 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.69□□□□□ -0.7
SF1-201ENST00000227503 C10orf126Q8N4M7 172 aa10.69□□□□□ -0.7
SF1-201ENST00000227503 IGHV7-81A0A0B4J1V7 117 aa10.68□□□□□ -0.7
SF1-201ENST00000227503 BRI3O95415 125 aa10.68□□□□□ -0.7
SF1-201ENST00000227503 IGHV3-30P01768 117 aa10.68□□□□□ -0.7
SF1-201ENST00000227503 IGHV3-30-5P0DP03 117 aa10.68□□□□□ -0.7
SF1-201ENST00000227503 OOSP1A8MZH6 123 aa10.68□□□□□ -0.7
SF1-201ENST00000227503 SCGB2A1O75556 95 aa10.68□□□□□ -0.7
SF1-201ENST00000227503 ZFP36P26651 326 aaKnown RBP10.68□□□□□ -0.7
SF1-201ENST00000227503 TSHBP01222 138 aa10.67□□□□□ -0.7
SF1-201ENST00000227503 SRD5A1P18405 259 aa10.67□□□□□ -0.7
SF1-201ENST00000227503 SBSPONQ8IVN8 264 aa10.67□□□□□ -0.7
SF1-201ENST00000227503 IGLV4-69A0A075B6H9 119 aa10.67□□□□□ -0.7
SF1-201ENST00000227503 A4D1N5 150 aa10.67□□□□□ -0.7
SF1-201ENST00000227503 ORMDL2Q53FV1 153 aa10.67□□□□□ -0.7
SF1-201ENST00000227503 MINOS1Q5TGZ0 78 aa10.67□□□□□ -0.7
SF1-201ENST00000227503 Q8N1Y9 231 aa10.67□□□□□ -0.7
SF1-201ENST00000227503 PRO1854Q9UHT4 67 aa10.67□□□□□ -0.7
SF1-201ENST00000227503 MINOS1-NBL1R4GNA1 71 aa10.67□□□□□ -0.7
SF1-201ENST00000227503 RNF223E7ERA6 249 aa10.67□□□□□ -0.7
SF1-201ENST00000227503 SRSF2Q01130 221 aaKnown RBP10.66□□□□□ -0.7
SF1-201ENST00000227503 Q8N9W7 124 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms