RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 PPDPFLQ8WWR9 84 aa11.69□□□□□ -0.54
VTN-201ENST00000226218 PTH2Q96A98 100 aa11.69□□□□□ -0.54
VTN-201ENST00000226218 FAM19A4Q96LR4 140 aa11.69□□□□□ -0.54
VTN-201ENST00000226218 LINC00477Q96M19 166 aa11.69□□□□□ -0.54
VTN-201ENST00000226218 EP300Q09472 2414 aaPredicted RBP11.68□□□□□ -0.54
VTN-201ENST00000226218 SPINK8P0C7L1 97 aa11.68□□□□□ -0.54
VTN-201ENST00000226218 RPL32P62910 135 aaKnown RBP11.68□□□□□ -0.54
VTN-201ENST00000226218 APRG1Q8IVJ8 170 aa11.68□□□□□ -0.54
VTN-201ENST00000226218 MAP1BP46821 2468 aaKnown RBP11.68□□□□□ -0.54
VTN-201ENST00000226218 LOC107984156A0A0G2JMH3 177 aa11.68□□□□□ -0.54
VTN-201ENST00000226218 IGIPA6NJ69 53 aa11.68□□□□□ -0.54
VTN-201ENST00000226218 SOCS3O14543 225 aa11.68□□□□□ -0.54
VTN-201ENST00000226218 TCL1BO95988 128 aa11.68□□□□□ -0.54
VTN-201ENST00000226218 ASIPP42127 132 aa11.68□□□□□ -0.54
VTN-201ENST00000226218 ANXA2RQ3ZCQ2 193 aa11.68□□□□□ -0.54
VTN-201ENST00000226218 LYRM7Q5U5X0 104 aa11.68□□□□□ -0.54
VTN-201ENST00000226218 ARL17AQ8IVW1 177 aa11.68□□□□□ -0.54
VTN-201ENST00000226218 WFDC12Q8WWY7 111 aa11.68□□□□□ -0.54
VTN-201ENST00000226218 KIF25-AS1Q9Y6Z4 181 aa11.68□□□□□ -0.54
VTN-201ENST00000226218 PIEZO2Q9H5I5 2752 aa11.67□□□□□ -0.54
VTN-201ENST00000226218 NXPH4O95158 308 aa11.67□□□□□ -0.54
VTN-201ENST00000226218 IGHV3-30P01768 117 aa11.67□□□□□ -0.54
VTN-201ENST00000226218 IGHV3-30-5P0DP03 117 aa11.67□□□□□ -0.54
VTN-201ENST00000226218 LINC00315P59091 139 aa11.67□□□□□ -0.54
VTN-201ENST00000226218 PHLDA3Q9Y5J5 127 aa11.67□□□□□ -0.54
VTN-201ENST00000226218 ATMQ13315 3056 aa11.67□□□□□ -0.54
VTN-201ENST00000226218 MUC4Q99102 2169 aa11.67□□□□□ -0.54
VTN-201ENST00000226218 PPP1R17O96001 155 aa11.66□□□□□ -0.54
VTN-201ENST00000226218 RNASE3P12724 160 aaKnown RBP11.66□□□□□ -0.54
VTN-201ENST00000226218 SFTA2Q6UW10 78 aa11.66□□□□□ -0.54
VTN-201ENST00000226218 Q6ZS46 218 aa11.66□□□□□ -0.54
VTN-201ENST00000226218 IGHV4OR15-8A0A075B7B6 117 aa11.66□□□□□ -0.54
VTN-201ENST00000226218 A0A087WW49 117 aa11.66□□□□□ -0.54
VTN-201ENST00000226218 MGPP08493 103 aa11.66□□□□□ -0.54
VTN-201ENST00000226218 CFC1BP0CG36 223 aa11.66□□□□□ -0.54
VTN-201ENST00000226218 CFC1P0CG37 223 aa11.66□□□□□ -0.54
VTN-201ENST00000226218 TSPEAR-AS2P59090 65 aa11.66□□□□□ -0.54
VTN-201ENST00000226218 PAPPA-AS1Q5QFB9 102 aa11.66□□□□□ -0.54
VTN-201ENST00000226218 AMELXQ99217 191 aa11.66□□□□□ -0.54
VTN-201ENST00000226218 AKAP13Q12802 2813 aa11.66□□□□□ -0.54
VTN-201ENST00000226218 TRBV20-1A0A075B6N2 111 aa11.65□□□□□ -0.54
VTN-201ENST00000226218 J3KRW8 73 aa11.65□□□□□ -0.54
VTN-201ENST00000226218 S100A4P26447 101 aaKnown RBP11.65□□□□□ -0.54
VTN-201ENST00000226218 ACACAQ13085 2346 aa11.65□□□□□ -0.54
VTN-201ENST00000226218 ANKRD11Q6UB99 2663 aaPredicted RBP11.65□□□□□ -0.54
VTN-201ENST00000226218 FAM90A27PA6NNH2 459 aa11.65□□□□□ -0.55
VTN-201ENST00000226218 OVOL1O14753 267 aa11.65□□□□□ -0.55
VTN-201ENST00000226218 POLR2KP53803 58 aaKnown RBP11.65□□□□□ -0.55
VTN-201ENST00000226218 C19orf54Q5BKX5 351 aa11.65□□□□□ -0.55
VTN-201ENST00000226218 SLC25A29Q8N8R3 303 aa11.65□□□□□ -0.55
VTN-201ENST00000226218 VCX2Q9H322 139 aa11.65□□□□□ -0.55
VTN-201ENST00000226218 HERVK_113P61574 105 aa11.64□□□□□ -0.55
VTN-201ENST00000226218 C10orf126Q8N4M7 172 aa11.64□□□□□ -0.55
VTN-201ENST00000226218 TP53TG1Q9Y2A0 90 aa11.64□□□□□ -0.55
VTN-201ENST00000226218 UBE2E1P51965 193 aa11.63□□□□□ -0.55
VTN-201ENST00000226218 PMVKQ15126 192 aa11.63□□□□□ -0.55
VTN-201ENST00000226218 GNRH2O43555 120 aa11.63□□□□□ -0.55
VTN-201ENST00000226218 DEFB1P60022 68 aa11.63□□□□□ -0.55
VTN-201ENST00000226218 OR10J6PQ8NGY7 276 aa11.63□□□□□ -0.55
VTN-201ENST00000226218 ABCA4P78363 2273 aa11.62□□□□□ -0.55
VTN-201ENST00000226218 Q5PR19 223 aa11.62□□□□□ -0.55
VTN-201ENST00000226218 TMEM141Q96I45 108 aa11.62□□□□□ -0.55
VTN-201ENST00000226218 TIMM17AQ99595 171 aa11.62□□□□□ -0.55
VTN-201ENST00000226218 A8MWV9 139 aa11.62□□□□□ -0.55
VTN-201ENST00000226218 M0QXV9 152 aa11.62□□□□□ -0.55
VTN-201ENST00000226218 ZNF688P0C7X2 276 aa11.62□□□□□ -0.55
VTN-201ENST00000226218 EMP1P54849 157 aa11.62□□□□□ -0.55
VTN-201ENST00000226218 C5orf56Q8N8D9 126 aa11.62□□□□□ -0.55
VTN-201ENST00000226218 ZNRF2Q8NHG8 242 aa11.62□□□□□ -0.55
VTN-201ENST00000226218 TRBV7-9A0A0J9YWB2 115 aa11.61□□□□□ -0.55
VTN-201ENST00000226218 EIF4EBP3O60516 100 aaPredicted RBP11.61□□□□□ -0.55
VTN-201ENST00000226218 SAA4P35542 130 aa11.61□□□□□ -0.55
VTN-201ENST00000226218 ZNF876PQ49A33 203 aa11.61□□□□□ -0.55
VTN-201ENST00000226218 ANKRD29Q8N6D5 301 aa11.61□□□□□ -0.55
VTN-201ENST00000226218 LRBAP50851 2863 aa11.61□□□□□ -0.55
VTN-201ENST00000226218 CDSNQ15517 529 aa11.6□□□□□ -0.55
VTN-201ENST00000226218 UNQ9165/PRO28630Q6UXU0 137 aa11.6□□□□□ -0.55
VTN-201ENST00000226218 ERG28Q9UKR5 140 aa11.6□□□□□ -0.55
VTN-201ENST00000226218 ANKHD1Q8IWZ3 2542 aaKnown RBP11.6□□□□□ -0.55
VTN-201ENST00000226218 FAM223BA6NKX1 122 aa11.6□□□□□ -0.55
VTN-201ENST00000226218 RNASE4P34096 147 aaKnown RBP11.6□□□□□ -0.55
VTN-201ENST00000226218 CRIP2P52943 208 aaPredicted RBP11.6□□□□□ -0.55
VTN-201ENST00000226218 RPL39P62891 51 aaKnown RBP11.6□□□□□ -0.55
VTN-201ENST00000226218 FAM223AQ8IWN6 122 aa11.6□□□□□ -0.55
VTN-201ENST00000226218 PRO1854Q9UHT4 67 aa11.6□□□□□ -0.55
VTN-201ENST00000226218 SUMO4Q6EEV6 95 aa11.59□□□□□ -0.55
VTN-201ENST00000226218 NDUFA4O00483 81 aa11.58□□□□□ -0.56
VTN-201ENST00000226218 ARL3P36405 182 aa11.58□□□□□ -0.56
VTN-201ENST00000226218 KIR2DL4Q99706 377 aa11.58□□□□□ -0.56
VTN-201ENST00000226218 TRAV41A0A0B4J266 112 aa11.57□□□□□ -0.56
VTN-201ENST00000226218 F6UB75 175 aa11.57□□□□□ -0.56
VTN-201ENST00000226218 J3QQQ9 107 aa11.57□□□□□ -0.56
VTN-201ENST00000226218 VCYO14598 125 aa11.57□□□□□ -0.56
VTN-201ENST00000226218 TRBV12-3P01733 135 aa11.57□□□□□ -0.56
VTN-201ENST00000226218 CITED1Q99966 193 aa11.57□□□□□ -0.56
VTN-201ENST00000226218 TRBV6-5A0A0K0K1A5 114 aa11.57□□□□□ -0.56
VTN-201ENST00000226218 IGHV3-33P01772 117 aa11.57□□□□□ -0.56
VTN-201ENST00000226218 TMEM263Q8WUH6 116 aaKnown RBP11.57□□□□□ -0.56
VTN-201ENST00000226218 RNF183Q96D59 192 aa11.57□□□□□ -0.56
VTN-201ENST00000226218 JPT2Q9H910 190 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms