RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 K7EQG2 157 aa16.45■□□□□ 0.22
SMARCD2-201ENST00000225742 LGALS1P09382 135 aaKnown RBP16.45■□□□□ 0.22
SMARCD2-201ENST00000225742 COX6B1P14854 86 aa16.45■□□□□ 0.22
SMARCD2-201ENST00000225742 EDN2P20800 178 aa16.45■□□□□ 0.22
SMARCD2-201ENST00000225742 GTF2H5Q6ZYL4 71 aa16.45■□□□□ 0.22
SMARCD2-201ENST00000225742 NEXN-AS1Q8NBZ9 246 aa16.45■□□□□ 0.22
SMARCD2-201ENST00000225742 NRGNQ92686 78 aa16.45■□□□□ 0.22
SMARCD2-201ENST00000225742 CHAC1Q9BUX1 264 aa16.45■□□□□ 0.22
SMARCD2-201ENST00000225742 VPREB3Q9UKI3 123 aa16.45■□□□□ 0.22
SMARCD2-201ENST00000225742 TGFAP01135 160 aa16.44■□□□□ 0.22
SMARCD2-201ENST00000225742 FSHBP01225 129 aa16.44■□□□□ 0.22
SMARCD2-201ENST00000225742 LINC00315P59091 139 aa16.44■□□□□ 0.22
SMARCD2-201ENST00000225742 TAL2Q16559 108 aa16.44■□□□□ 0.22
SMARCD2-201ENST00000225742 CHTOPQ9Y3Y2 248 aaKnown RBP16.44■□□□□ 0.22
SMARCD2-201ENST00000225742 DOPEY1Q5JWR5 2465 aa16.44■□□□□ 0.22
SMARCD2-201ENST00000225742 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.43■□□□□ 0.221e-7■■■■□ 24.6
SMARCD2-201ENST00000225742 TRBV25-1A0A075B6N4 114 aa16.43■□□□□ 0.22
SMARCD2-201ENST00000225742 A0A0J9YX75 114 aa16.43■□□□□ 0.22
SMARCD2-201ENST00000225742 SPRY2O43597 315 aa16.43■□□□□ 0.22
SMARCD2-201ENST00000225742 SPTAN1Q13813 2472 aaKnown RBP16.43■□□□□ 0.22
SMARCD2-201ENST00000225742 C2orf66Q6UXQ4 117 aa16.42■□□□□ 0.22
SMARCD2-201ENST00000225742 CSTL1Q9H114 145 aa16.42■□□□□ 0.22
SMARCD2-201ENST00000225742 GAGE10A6NGK3 116 aa16.42■□□□□ 0.22
SMARCD2-201ENST00000225742 DUSP14O95147 198 aaKnown RBP16.42■□□□□ 0.22
SMARCD2-201ENST00000225742 SMIM13P0DJ93 91 aa16.42■□□□□ 0.22
SMARCD2-201ENST00000225742 Q6YL49 198 aa16.42■□□□□ 0.22
SMARCD2-201ENST00000225742 RNF152Q8N8N0 203 aa16.41■□□□□ 0.22
SMARCD2-201ENST00000225742 C9orf85Q96MD7 179 aa16.41■□□□□ 0.22
SMARCD2-201ENST00000225742 TM2D2Q9BX73 214 aa16.41■□□□□ 0.22
SMARCD2-201ENST00000225742 TRAV12-3A0A0B4J271 114 aa16.4■□□□□ 0.22
SMARCD2-201ENST00000225742 CD7P09564 240 aa16.4■□□□□ 0.22
SMARCD2-201ENST00000225742 RNASE8Q8TDE3 154 aaKnown RBP16.4■□□□□ 0.22
SMARCD2-201ENST00000225742 UBE2E2Q96LR5 201 aa16.4■□□□□ 0.22
SMARCD2-201ENST00000225742 CSMD1Q96PZ7 3565 aa16.4■□□□□ 0.22
SMARCD2-201ENST00000225742 LINC01619G3V211 115 aa16.4■□□□□ 0.22
SMARCD2-201ENST00000225742 ZNF688P0C7X2 276 aa16.4■□□□□ 0.22
SMARCD2-201ENST00000225742 UFSP1Q6NVU6 142 aa16.4■□□□□ 0.22
SMARCD2-201ENST00000225742 SYT8Q8NBV8 401 aa16.4■□□□□ 0.22
SMARCD2-201ENST00000225742 IGHV3-16A0A0C4DH30 117 aa16.39■□□□□ 0.21
SMARCD2-201ENST00000225742 CACNA1AO00555 2505 aa16.39■□□□□ 0.21
SMARCD2-201ENST00000225742 GCSHP23434 173 aa16.39■□□□□ 0.21
SMARCD2-201ENST00000225742 C10orf99Q6UWK7 81 aa16.39■□□□□ 0.21
SMARCD2-201ENST00000225742 H3BUT2 72 aa16.38■□□□□ 0.21
SMARCD2-201ENST00000225742 K7EP34 96 aa16.38■□□□□ 0.21
SMARCD2-201ENST00000225742 VCYO14598 125 aa16.38■□□□□ 0.21
SMARCD2-201ENST00000225742 POLR2KP53803 58 aaKnown RBP16.38■□□□□ 0.21
SMARCD2-201ENST00000225742 BAALCQ8WXS3 180 aa16.38■□□□□ 0.21
SMARCD2-201ENST00000225742 ZNF702PQ9H963 129 aa16.38■□□□□ 0.21
SMARCD2-201ENST00000225742 CYSLTR1Q9Y271 337 aa16.38■□□□□ 0.21
SMARCD2-201ENST00000225742 SELENOKQ9Y6D0 94 aa16.38■□□□□ 0.21
SMARCD2-201ENST00000225742 TRBV6-5A0A0K0K1A5 114 aa16.38■□□□□ 0.21
SMARCD2-201ENST00000225742 SUMO4Q6EEV6 95 aa16.38■□□□□ 0.21
SMARCD2-201ENST00000225742 CEND1Q8N111 149 aa16.38■□□□□ 0.21
SMARCD2-201ENST00000225742 TTTY13Q9BZ97 58 aa16.38■□□□□ 0.21
SMARCD2-201ENST00000225742 MUC4Q99102 2169 aa16.37■□□□□ 0.21
SMARCD2-201ENST00000225742 CDKN1BP46527 198 aa16.37■□□□□ 0.21
SMARCD2-201ENST00000225742 SYNJ2BPP57105 145 aa16.36■□□□□ 0.21
SMARCD2-201ENST00000225742 MAPKAPK5-AS1Q8N8E1 139 aa16.36■□□□□ 0.21
SMARCD2-201ENST00000225742 JMJD8Q96S16 334 aa16.36■□□□□ 0.21
SMARCD2-201ENST00000225742 CST9LQ9H4G1 147 aa16.36■□□□□ 0.21
SMARCD2-201ENST00000225742 GAGE12BA1L429 117 aa16.35■□□□□ 0.21
SMARCD2-201ENST00000225742 OR11H12B2RN74 326 aa16.35■□□□□ 0.21
SMARCD2-201ENST00000225742 IGHV4-31P0DP07 118 aa16.35■□□□□ 0.21
SMARCD2-201ENST00000225742 FXYD2P54710 66 aa16.35■□□□□ 0.21
SMARCD2-201ENST00000225742 PAPPA-AS1Q5QFB9 102 aa16.35■□□□□ 0.21
SMARCD2-201ENST00000225742 FOXI2Q6ZQN5 318 aa16.35■□□□□ 0.21
SMARCD2-201ENST00000225742 OR11H1Q8NG94 326 aa16.35■□□□□ 0.21
SMARCD2-201ENST00000225742 OR11H2Q8NH07 326 aa16.35■□□□□ 0.21
SMARCD2-201ENST00000225742 TMEM141Q96I45 108 aa16.35■□□□□ 0.21
SMARCD2-201ENST00000225742 BEX4Q9NWD9 120 aaPredicted RBP16.35■□□□□ 0.21
SMARCD2-201ENST00000225742 ASH1LQ9NR48 2969 aaKnown RBP16.35■□□□□ 0.21
SMARCD2-201ENST00000225742 IGHV1OR15-1A0A075B7D0 117 aa16.35■□□□□ 0.21
SMARCD2-201ENST00000225742 A0A1W2PPM0 123 aa16.35■□□□□ 0.21
SMARCD2-201ENST00000225742 PRSS29PA6NIE9 313 aa16.35■□□□□ 0.21
SMARCD2-201ENST00000225742 RBX1P62877 108 aa16.35■□□□□ 0.21
SMARCD2-201ENST00000225742 OR5A1Q8NGJ0 315 aa16.35■□□□□ 0.21
SMARCD2-201ENST00000225742 KIR2DL4Q99706 377 aa16.35■□□□□ 0.21
SMARCD2-201ENST00000225742 HOXD3P31249 432 aaPredicted RBP16.34■□□□□ 0.21
SMARCD2-201ENST00000225742 RIPPLY3P57055 190 aa16.33■□□□□ 0.21
SMARCD2-201ENST00000225742 ZFP2Q6ZN57 461 aa16.33■□□□□ 0.21
SMARCD2-201ENST00000225742 RAB37Q96AX2 223 aa16.33■□□□□ 0.21
SMARCD2-201ENST00000225742 MYMXA0A1B0GTQ4 84 aa16.33■□□□□ 0.2
SMARCD2-201ENST00000225742 E9PLD3 99 aa16.33■□□□□ 0.2
SMARCD2-201ENST00000225742 F5H697 171 aa16.33■□□□□ 0.2
SMARCD2-201ENST00000225742 LRRC75A-AS1Q8N1F1 130 aa16.33■□□□□ 0.2
SMARCD2-201ENST00000225742 TRBV27A0A0K0K1C4 114 aa16.32■□□□□ 0.2
SMARCD2-201ENST00000225742 FABP2P12104 132 aa16.32■□□□□ 0.2
SMARCD2-201ENST00000225742 WFDC12Q8WWY7 111 aa16.32■□□□□ 0.2
SMARCD2-201ENST00000225742 TIMM17AQ99595 171 aa16.32■□□□□ 0.2
SMARCD2-201ENST00000225742 JPT2Q9H910 190 aa16.32■□□□□ 0.2
SMARCD2-201ENST00000225742 PIEZO1Q92508 2521 aa16.32■□□□□ 0.2
SMARCD2-201ENST00000225742 TRGV11A0A075B6L2 103 aa16.31■□□□□ 0.2
SMARCD2-201ENST00000225742 A0A087WWL8 130 aa16.31■□□□□ 0.2
SMARCD2-201ENST00000225742 IGIPA6NJ69 53 aa16.31■□□□□ 0.2
SMARCD2-201ENST00000225742 OCIAD2Q56VL3 154 aa16.31■□□□□ 0.2
SMARCD2-201ENST00000225742 SAMD5Q5TGI4 173 aa16.31■□□□□ 0.2
SMARCD2-201ENST00000225742 Q8N1Y9 231 aa16.31■□□□□ 0.2
SMARCD2-201ENST00000225742 Q8N2B8 174 aa16.31■□□□□ 0.2
SMARCD2-201ENST00000225742 TRAV2A0A0B4J234 112 aa16.3■□□□□ 0.2
SMARCD2-201ENST00000225742 MAPK1IP1LQ8NDC0 245 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms