RNA–Protein interactions for RNA: ENST00000215794.7

USP18-201, Transcript of ubiquitin specific peptidase 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP18, Length 2,129 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP18-201ENST00000215794 CCL25O15444 150 aa13.63□□□□□ -0.23
USP18-201ENST00000215794 GATA1P15976 413 aaPredicted RBP13.63□□□□□ -0.23
USP18-201ENST00000215794 EVI2AP22794 236 aa13.63□□□□□ -0.23
USP18-201ENST00000215794 FAM19A4Q96LR4 140 aa13.63□□□□□ -0.23
USP18-201ENST00000215794 UFC1Q9Y3C8 167 aa13.63□□□□□ -0.23
USP18-201ENST00000215794 IGHV4OR15-8A0A075B7B6 117 aa13.62□□□□□ -0.23
USP18-201ENST00000215794 A0A087WW49 117 aa13.62□□□□□ -0.23
USP18-201ENST00000215794 RNASE4P34096 147 aaKnown RBP13.61□□□□□ -0.23
USP18-201ENST00000215794 SYNJ2BPP57105 145 aa13.61□□□□□ -0.23
USP18-201ENST00000215794 RBX1P62877 108 aa13.61□□□□□ -0.23
USP18-201ENST00000215794 Q6ZSV7 163 aa13.61□□□□□ -0.23
USP18-201ENST00000215794 MAP1LC3CQ9BXW4 147 aa13.61□□□□□ -0.23
USP18-201ENST00000215794 HSPB8Q9UJY1 196 aa13.61□□□□□ -0.23
USP18-201ENST00000215794 LGALS1P09382 135 aaKnown RBP13.61□□□□□ -0.23
USP18-201ENST00000215794 IGLL1P15814 213 aa13.61□□□□□ -0.23
USP18-201ENST00000215794 MYOZ3Q8TDC0 251 aa13.61□□□□□ -0.23
USP18-201ENST00000215794 PMCHL2Q9BQD1 86 aa13.61□□□□□ -0.23
USP18-201ENST00000215794 SNAI2O43623 268 aa13.6□□□□□ -0.23
USP18-201ENST00000215794 RNASE1P07998 156 aaKnown RBP13.6□□□□□ -0.23
USP18-201ENST00000215794 C18orf65Q6ZTR6 163 aa13.6□□□□□ -0.23
USP18-201ENST00000215794 WFDC12Q8WWY7 111 aa13.6□□□□□ -0.23
USP18-201ENST00000215794 ZNF747Q9BV97 191 aa13.6□□□□□ -0.23
USP18-201ENST00000215794 C2CD3Q4AC94 2353 aa13.6□□□□□ -0.23
USP18-201ENST00000215794 TRAV21A0A0B4J279 112 aa13.6□□□□□ -0.23
USP18-201ENST00000215794 ELANEP08246 267 aa13.6□□□□□ -0.23
USP18-201ENST00000215794 MS4A6AQ9H2W1 248 aa13.6□□□□□ -0.23
USP18-201ENST00000215794 ANXA2RQ3ZCQ2 193 aa13.59□□□□□ -0.23
USP18-201ENST00000215794 SPANXN1Q5VSR9 72 aa13.59□□□□□ -0.23
USP18-201ENST00000215794 hDV102S1A0JD36 115 aa13.58□□□□□ -0.23
USP18-201ENST00000215794 TRAV26-2A0A0B4J265 109 aa13.58□□□□□ -0.24
USP18-201ENST00000215794 TNFRSF6BO95407 300 aa13.58□□□□□ -0.24
USP18-201ENST00000215794 HOXD3P31249 432 aaPredicted RBP13.58□□□□□ -0.24
USP18-201ENST00000215794 HINT1P49773 126 aaPredicted RBP13.58□□□□□ -0.24
USP18-201ENST00000215794 TP73-AS1Q9UF72 201 aa13.58□□□□□ -0.24
USP18-201ENST00000215794 ZNF688P0C7X2 276 aa13.57□□□□□ -0.24
USP18-201ENST00000215794 DEFB136Q30KP8 78 aa13.57□□□□□ -0.24
USP18-201ENST00000215794 PET117Q6UWS5 81 aa13.57□□□□□ -0.24
USP18-201ENST00000215794 OR4C5Q8NGB2 326 aa13.57□□□□□ -0.24
USP18-201ENST00000215794 RNASE8Q8TDE3 154 aaKnown RBP13.57□□□□□ -0.24
USP18-201ENST00000215794 UBE2E2Q96LR5 201 aa13.57□□□□□ -0.24
USP18-201ENST00000215794 PPBPP02775 128 aa13.57□□□□□ -0.24
USP18-201ENST00000215794 ID1P41134 155 aa13.57□□□□□ -0.24
USP18-201ENST00000215794 APRG1Q8IVJ8 170 aa13.57□□□□□ -0.24
USP18-201ENST00000215794 MAP1LC3AQ9H492 121 aa13.57□□□□□ -0.24
USP18-201ENST00000215794 IGHV4-4A0A075B6R2 117 aa13.56□□□□□ -0.24
USP18-201ENST00000215794 GNRH2O43555 120 aa13.56□□□□□ -0.24
USP18-201ENST00000215794 PSMG4Q5JS54 123 aa13.56□□□□□ -0.24
USP18-201ENST00000215794 ST20Q9HBF5 79 aa13.56□□□□□ -0.24
USP18-201ENST00000215794 M0R381 172 aa13.55□□□□□ -0.24
USP18-201ENST00000215794 RNF152Q8N8N0 203 aa13.55□□□□□ -0.24
USP18-201ENST00000215794 CACNG7P62955 275 aa13.55□□□□□ -0.24
USP18-201ENST00000215794 LINC01545Q5VT33 79 aa13.55□□□□□ -0.24
USP18-201ENST00000215794 Q8N2B8 174 aa13.55□□□□□ -0.24
USP18-201ENST00000215794 C11orf44Q8N8P7 122 aa13.55□□□□□ -0.24
USP18-201ENST00000215794 HBDP02042 147 aa13.54□□□□□ -0.24
USP18-201ENST00000215794 S100A4P26447 101 aaKnown RBP13.54□□□□□ -0.24
USP18-201ENST00000215794 ASIPP42127 132 aa13.54□□□□□ -0.24
USP18-201ENST00000215794 SMIM15Q7Z3B0 74 aa13.54□□□□□ -0.24
USP18-201ENST00000215794 SLURP1P55000 103 aa13.54□□□□□ -0.24
USP18-201ENST00000215794 JMJD8Q96S16 334 aa13.54□□□□□ -0.24
USP18-201ENST00000215794 KLLNB2CW77 178 aa13.53□□□□□ -0.24
USP18-201ENST00000215794 LGALS9O00182 355 aa13.53□□□□□ -0.24
USP18-201ENST00000215794 IGKV3-20P01619 116 aa13.53□□□□□ -0.24
USP18-201ENST00000215794 ADAMTSL5Q6ZMM2 481 aa13.53□□□□□ -0.24
USP18-201ENST00000215794 OR2K2Q8NGT1 345 aa13.53□□□□□ -0.24
USP18-201ENST00000215794 TRBV7-9A0A0J9YWB2 115 aa13.52□□□□□ -0.24
USP18-201ENST00000215794 K7EQG2 157 aa13.52□□□□□ -0.24
USP18-201ENST00000215794 RNASE3P12724 160 aaKnown RBP13.52□□□□□ -0.24
USP18-201ENST00000215794 NRACQ8N912 160 aa13.52□□□□□ -0.24
USP18-201ENST00000215794 LINC01006Q8NI28 216 aa13.52□□□□□ -0.24
USP18-201ENST00000215794 DUX3Q96PT4 197 aa13.52□□□□□ -0.24
USP18-201ENST00000215794 VAMP3Q15836 100 aa13.51□□□□□ -0.25
USP18-201ENST00000215794 TCTEX1D4Q5JR98 221 aa13.51□□□□□ -0.25
USP18-201ENST00000215794 SAMD13Q5VXD3 122 aa13.51□□□□□ -0.25
USP18-201ENST00000215794 C12orf54Q6X4T0 127 aa13.51□□□□□ -0.25
USP18-201ENST00000215794 PHLDA3Q9Y5J5 127 aa13.51□□□□□ -0.25
USP18-201ENST00000215794 IGLV2-18A0A075B6J9 118 aa13.51□□□□□ -0.25
USP18-201ENST00000215794 LINC01546A6NGU7 62 aa13.51□□□□□ -0.25
USP18-201ENST00000215794 SCRT2Q9NQ03 307 aa13.51□□□□□ -0.25
USP18-201ENST00000215794 TRAV12-3A0A0B4J271 114 aa13.5□□□□□ -0.25
USP18-201ENST00000215794 LEPP41159 167 aa13.5□□□□□ -0.25
USP18-201ENST00000215794 SNRPD3P62318 126 aaKnown RBP13.5□□□□□ -0.25
USP18-201ENST00000215794 C14orf178Q8N769 122 aaPredicted RBP13.5□□□□□ -0.25
USP18-201ENST00000215794 C18orf15Q96N68 181 aa13.5□□□□□ -0.25
USP18-201ENST00000215794 NXT2Q9NPJ8 142 aaKnown RBP13.5□□□□□ -0.25
USP18-201ENST00000215794 TRAV12-2A0A075B6T6 113 aa13.49□□□□□ -0.25
USP18-201ENST00000215794 A0A0J9YX75 114 aa13.49□□□□□ -0.25
USP18-201ENST00000215794 ATRQ13535 2644 aa13.49□□□□□ -0.25
USP18-201ENST00000215794 KHDC1LQ5JSQ8 128 aa13.49□□□□□ -0.25
USP18-201ENST00000215794 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.49□□□□□ -0.25
USP18-201ENST00000215794 FBN1P35555 2871 aaKnown RBP13.49□□□□□ -0.25
USP18-201ENST00000215794 AGRNO00468 2067 aa13.48□□□□□ -0.25
USP18-201ENST00000215794 Q8N8P6 123 aa13.48□□□□□ -0.25
USP18-201ENST00000215794 OR11H1Q8NG94 326 aa13.48□□□□□ -0.25
USP18-201ENST00000215794 IFI27L1Q96BM0 104 aa13.48□□□□□ -0.25
USP18-201ENST00000215794 TENM1Q9UKZ4 2725 aa13.48□□□□□ -0.25
USP18-201ENST00000215794 MUC4Q99102 2169 aa13.47□□□□□ -0.25
USP18-201ENST00000215794 MED14OSP0DP75 135 aa13.47□□□□□ -0.25
USP18-201ENST00000215794 SLC25A34Q6PIV7 304 aa13.47□□□□□ -0.25
USP18-201ENST00000215794 FAM159AQ6UWV7 190 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms