RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 ZMAT4Q9H898 229 aa9.88□□□□□ -0.83
LMCD1-201ENST00000157600 CR1LQ2VPA4 569 aa9.87□□□□□ -0.83
LMCD1-201ENST00000157600 COL5A1P20908 1838 aaPredicted RBP9.87□□□□□ -0.83
LMCD1-201ENST00000157600 LRRK2Q5S007 2527 aa9.87□□□□□ -0.83
LMCD1-201ENST00000157600 CARD19Q96LW7 228 aa9.87□□□□□ -0.83
LMCD1-201ENST00000157600 HIGD1BQ9P298 99 aa9.87□□□□□ -0.83
LMCD1-201ENST00000157600 ORMDL1Q9P0S3 153 aa9.87□□□□□ -0.83
LMCD1-201ENST00000157600 C22orf46C9J442 243 aa9.87□□□□□ -0.83
LMCD1-201ENST00000157600 ANKRD29Q8N6D5 301 aa9.87□□□□□ -0.83
LMCD1-201ENST00000157600 SCRT2Q9NQ03 307 aa9.87□□□□□ -0.83
LMCD1-201ENST00000157600 TRACP01848 142 aa9.87□□□□□ -0.83
LMCD1-201ENST00000157600 ZNF503-AS2A6NEH8 195 aa9.86□□□□□ -0.83
LMCD1-201ENST00000157600 K7EN84 100 aa9.86□□□□□ -0.83
LMCD1-201ENST00000157600 PFN2P35080 140 aa9.86□□□□□ -0.83
LMCD1-201ENST00000157600 ETDBQ3ZM63 59 aa9.86□□□□□ -0.83
LMCD1-201ENST00000157600 ZNRD1Q9P1U0 126 aa9.86□□□□□ -0.83
LMCD1-201ENST00000157600 TRAV12-1A0A0B4J245 112 aa9.86□□□□□ -0.83
LMCD1-201ENST00000157600 TRAV25A0A0B4J276 109 aa9.86□□□□□ -0.83
LMCD1-201ENST00000157600 C11orf53Q8IXP5 236 aa9.86□□□□□ -0.83
LMCD1-201ENST00000157600 RSPO3Q9BXY4 272 aaPredicted RBP9.86□□□□□ -0.83
LMCD1-201ENST00000157600 IGLV11-55A0A075B6I3 123 aa9.86□□□□□ -0.83
LMCD1-201ENST00000157600 GP9P14770 177 aa9.86□□□□□ -0.83
LMCD1-201ENST00000157600 COL4A4P53420 1690 aaPredicted RBP9.86□□□□□ -0.83
LMCD1-201ENST00000157600 PIEZO2Q9H5I5 2752 aa9.86□□□□□ -0.83
LMCD1-201ENST00000157600 ANGP03950 147 aaKnown RBP9.85□□□□□ -0.83
LMCD1-201ENST00000157600 FUSP35637 526 aaKnown RBP eCLIP9.85□□□□□ -0.83
LMCD1-201ENST00000157600 TPSG1Q9NRR2 321 aa9.85□□□□□ -0.83
LMCD1-201ENST00000157600 CXCL5P42830 114 aa9.85□□□□□ -0.83
LMCD1-201ENST00000157600 DYNAPQ8N1N2 210 aa9.85□□□□□ -0.83
LMCD1-201ENST00000157600 ADAMTS20P59510 1910 aa9.85□□□□□ -0.83
LMCD1-201ENST00000157600 EGR2P11161 476 aaPredicted RBP9.85□□□□□ -0.83
LMCD1-201ENST00000157600 C12orf74Q32Q52 190 aa9.85□□□□□ -0.83
LMCD1-201ENST00000157600 NAV2Q8IVL1 2488 aa9.85□□□□□ -0.83
LMCD1-201ENST00000157600 PTPRBP23467 1997 aa9.85□□□□□ -0.83
LMCD1-201ENST00000157600 TRAV26-2A0A0B4J265 109 aa9.85□□□□□ -0.83
LMCD1-201ENST00000157600 K7EMT4 169 aa9.85□□□□□ -0.83
LMCD1-201ENST00000157600 GAGE7O76087 117 aa9.84□□□□□ -0.83
LMCD1-201ENST00000157600 GAGE12FP0CL80 117 aa9.84□□□□□ -0.83
LMCD1-201ENST00000157600 GAGE12GP0CL81 117 aa9.84□□□□□ -0.83
LMCD1-201ENST00000157600 GAGE12IP0CL82 117 aa9.84□□□□□ -0.83
LMCD1-201ENST00000157600 DEFB125Q8N687 156 aa9.84□□□□□ -0.83
LMCD1-201ENST00000157600 PRSS29PA6NIE9 313 aa9.84□□□□□ -0.83
LMCD1-201ENST00000157600 CFC1BP0CG36 223 aa9.84□□□□□ -0.83
LMCD1-201ENST00000157600 CFC1P0CG37 223 aa9.84□□□□□ -0.83
LMCD1-201ENST00000157600 ZNF625Q96I27 306 aaPredicted RBP9.84□□□□□ -0.83
LMCD1-201ENST00000157600 TMEM258P61165 79 aa9.84□□□□□ -0.83
LMCD1-201ENST00000157600 HIVEP3Q5T1R4 2406 aa9.84□□□□□ -0.83
LMCD1-201ENST00000157600 CCL24O00175 119 aa9.84□□□□□ -0.83
LMCD1-201ENST00000157600 CENPVL3A0A0U1RRI6 287 aa9.84□□□□□ -0.83
LMCD1-201ENST00000157600 GAGE6Q13070 117 aa9.84□□□□□ -0.83
LMCD1-201ENST00000157600 C9orf66Q5T8R8 295 aa9.84□□□□□ -0.83
LMCD1-201ENST00000157600 C9orf47Q6ZRZ4 202 aa9.84□□□□□ -0.83
LMCD1-201ENST00000157600 PRR30Q53SZ7 412 aaPredicted RBP9.83□□□□□ -0.84
LMCD1-201ENST00000157600 TRAV12-2A0A075B6T6 113 aa9.83□□□□□ -0.84
LMCD1-201ENST00000157600 I3L2K1 104 aa9.83□□□□□ -0.84
LMCD1-201ENST00000157600 CTRLP40313 264 aa9.83□□□□□ -0.84
LMCD1-201ENST00000157600 MORN5Q5VZ52 161 aa9.83□□□□□ -0.84
LMCD1-201ENST00000157600 AGPAT4-IT1Q9H0P7 198 aa9.83□□□□□ -0.84
LMCD1-201ENST00000157600 TLN2Q9Y4G6 2542 aa9.82□□□□□ -0.84
LMCD1-201ENST00000157600 SMIM20Q8N5G0 67 aa9.82□□□□□ -0.84
LMCD1-201ENST00000157600 RAI1Q7Z5J4 1906 aaPredicted RBP9.82□□□□□ -0.84
LMCD1-201ENST00000157600 KNCNA6PVL3 124 aa9.82□□□□□ -0.84
LMCD1-201ENST00000157600 K7EIM0 57 aa9.82□□□□□ -0.84
LMCD1-201ENST00000157600 H3BMG7 143 aa9.82□□□□□ -0.84
LMCD1-201ENST00000157600 IGHV3-16A0A0C4DH30 117 aa9.82□□□□□ -0.84
LMCD1-201ENST00000157600 BUB3O43684 328 aa9.82□□□□□ -0.84
LMCD1-201ENST00000157600 MRPL23Q16540 153 aaKnown RBP9.82□□□□□ -0.84
LMCD1-201ENST00000157600 TIMM17AQ99595 171 aa9.81□□□□□ -0.84
LMCD1-201ENST00000157600 PDE6GP18545 87 aa9.81□□□□□ -0.84
LMCD1-201ENST00000157600 K7EQD1 137 aa9.81□□□□□ -0.84
LMCD1-201ENST00000157600 CRYGCP07315 174 aa9.81□□□□□ -0.84
LMCD1-201ENST00000157600 C16orf54Q6UWD8 224 aa9.81□□□□□ -0.84
LMCD1-201ENST00000157600 FAM120AOSQ5T036 256 aa9.81□□□□□ -0.84
LMCD1-201ENST00000157600 IGF2BP2-AS1Q96M15 143 aa9.81□□□□□ -0.84
LMCD1-201ENST00000157600 GPHB5Q86YW7 130 aa9.81□□□□□ -0.84
LMCD1-201ENST00000157600 TRBV7-3A0A075B6L6 115 aa9.8□□□□□ -0.84
LMCD1-201ENST00000157600 IGHV7-81A0A0B4J1V7 117 aa9.8□□□□□ -0.84
LMCD1-201ENST00000157600 HAMPP81172 84 aa9.8□□□□□ -0.84
LMCD1-201ENST00000157600 DUX4L9Q6RFH8 374 aaPredicted RBP9.8□□□□□ -0.84
LMCD1-201ENST00000157600 FSTL3O95633 263 aa9.8□□□□□ -0.84
LMCD1-201ENST00000157600 Q9H8V8 135 aa9.8□□□□□ -0.84
LMCD1-201ENST00000157600 DKK2Q9UBU2 259 aa9.8□□□□□ -0.84
LMCD1-201ENST00000157600 PTPRSQ13332 1948 aa9.8□□□□□ -0.84
LMCD1-201ENST00000157600 J3QKU1 62 aa9.8□□□□□ -0.84
LMCD1-201ENST00000157600 IGKV1-17P01599 117 aa9.8□□□□□ -0.84
LMCD1-201ENST00000157600 ZNF524Q96C55 264 aa9.8□□□□□ -0.84
LMCD1-201ENST00000157600 FBXL19-AS1Q494R0 122 aa9.79□□□□□ -0.84
LMCD1-201ENST00000157600 C1orf43Q9BWL3 253 aa9.79□□□□□ -0.84
LMCD1-201ENST00000157600 U3KQE9 123 aa9.79□□□□□ -0.84
LMCD1-201ENST00000157600 LYPD6Q86Y78 171 aa9.79□□□□□ -0.84
LMCD1-201ENST00000157600 NOP10Q9NPE3 64 aaKnown RBP9.79□□□□□ -0.84
LMCD1-201ENST00000157600 TEN1Q86WV5 123 aa9.79□□□□□ -0.84
LMCD1-201ENST00000157600 JMJD7-PLA2G4BH0Y9G9 81 aa9.78□□□□□ -0.84
LMCD1-201ENST00000157600 CTSZQ9UBR2 303 aa9.78□□□□□ -0.84
LMCD1-201ENST00000157600 C5orf56Q8N8D9 126 aa9.78□□□□□ -0.84
LMCD1-201ENST00000157600 CTSGP08311 255 aa9.78□□□□□ -0.84
LMCD1-201ENST00000157600 CFHR3Q02985 330 aa9.78□□□□□ -0.84
LMCD1-201ENST00000157600 WI2-2373I1.2A0A1W2PRP0 233 aa9.78□□□□□ -0.84
LMCD1-201ENST00000157600 ATOX1O00244 68 aa9.78□□□□□ -0.84
LMCD1-201ENST00000157600 ATP5G1P05496 136 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms