RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 PLA2G2AP14555 144 aa9.32□□□□□ -0.92
CHPF2-201ENST00000035307 RNF114Q9Y508 228 aa9.32□□□□□ -0.92
CHPF2-201ENST00000035307 HTN3P15516 51 aa9.32□□□□□ -0.92
CHPF2-201ENST00000035307 LOXL1Q08397 574 aaPredicted RBP9.32□□□□□ -0.92
CHPF2-201ENST00000035307 NF1P21359 2839 aa9.32□□□□□ -0.92
CHPF2-201ENST00000035307 HRNRQ86YZ3 2850 aaPredicted RBP9.32□□□□□ -0.92
CHPF2-201ENST00000035307 UNQ9165/PRO28630Q6UXU0 137 aa9.31□□□□□ -0.92
CHPF2-201ENST00000035307 SVEP1Q4LDE5 3571 aa9.31□□□□□ -0.92
CHPF2-201ENST00000035307 SRSF8Q9BRL6 282 aaKnown RBP9.31□□□□□ -0.92
CHPF2-201ENST00000035307 XCL2Q9UBD3 114 aa9.31□□□□□ -0.92
CHPF2-201ENST00000035307 TP53TG3Q9ULZ0 132 aa9.31□□□□□ -0.92
CHPF2-201ENST00000035307 C5orf56Q8N8D9 126 aa9.31□□□□□ -0.92
CHPF2-201ENST00000035307 GFRA4Q9GZZ7 299 aa9.31□□□□□ -0.92
CHPF2-201ENST00000035307 TRGV2A0A075B6R0 118 aa9.31□□□□□ -0.92
CHPF2-201ENST00000035307 RPL35AP18077 110 aaKnown RBP9.31□□□□□ -0.92
CHPF2-201ENST00000035307 CT83Q5H943 113 aa9.31□□□□□ -0.92
CHPF2-201ENST00000035307 PCP2Q8IVA1 136 aa9.31□□□□□ -0.92
CHPF2-201ENST00000035307 MS4A6AQ9H2W1 248 aa9.31□□□□□ -0.92
CHPF2-201ENST00000035307 RNASE13Q5GAN3 156 aaKnown RBP9.3□□□□□ -0.92
CHPF2-201ENST00000035307 LINC00574Q9H8X3 128 aa9.3□□□□□ -0.92
CHPF2-201ENST00000035307 STAB1Q9NY15 2570 aa9.3□□□□□ -0.92
CHPF2-201ENST00000035307 ZNF80P51504 273 aaPredicted RBP9.3□□□□□ -0.92
CHPF2-201ENST00000035307 C8orf31Q8N9H6 132 aa9.3□□□□□ -0.92
CHPF2-201ENST00000035307 TRAV2A0A0B4J234 112 aa9.3□□□□□ -0.92
CHPF2-201ENST00000035307 VCX2Q9H322 139 aa9.3□□□□□ -0.92
CHPF2-201ENST00000035307 DPH3P1Q9H4G8 78 aa9.3□□□□□ -0.92
CHPF2-201ENST00000035307 MRPL35Q9NZE8 188 aaKnown RBP9.3□□□□□ -0.92
CHPF2-201ENST00000035307 AGRNO00468 2067 aa9.29□□□□□ -0.92
CHPF2-201ENST00000035307 A0A1B0GWB2 263 aa9.29□□□□□ -0.92
CHPF2-201ENST00000035307 CFHR3Q02985 330 aa9.29□□□□□ -0.92
CHPF2-201ENST00000035307 KIR3DS1Q14943 382 aa9.29□□□□□ -0.92
CHPF2-201ENST00000035307 MEIG1Q5JSS6 88 aa9.29□□□□□ -0.92
CHPF2-201ENST00000035307 IGHV3-38A0A0C4DH36 116 aa9.29□□□□□ -0.92
CHPF2-201ENST00000035307 ODF3BA8MYP8 253 aa9.29□□□□□ -0.92
CHPF2-201ENST00000035307 BUB3O43684 328 aa9.29□□□□□ -0.92
CHPF2-201ENST00000035307 CIDEAO60543 219 aa9.29□□□□□ -0.92
CHPF2-201ENST00000035307 CRYGCP07315 174 aa9.29□□□□□ -0.92
CHPF2-201ENST00000035307 IGHV4-31P0DP07 118 aa9.29□□□□□ -0.92
CHPF2-201ENST00000035307 TMEM262E9PQX1 116 aa9.29□□□□□ -0.92
CHPF2-201ENST00000035307 SAP30O75446 220 aa9.29□□□□□ -0.92
CHPF2-201ENST00000035307 SLURP1P55000 103 aa9.29□□□□□ -0.92
CHPF2-201ENST00000035307 STHQ8IWL8 128 aa9.29□□□□□ -0.92
CHPF2-201ENST00000035307 NBEAL1Q6ZS30 2694 aa9.28□□□□□ -0.92
CHPF2-201ENST00000035307 MRAP2Q96G30 205 aa9.28□□□□□ -0.92
CHPF2-201ENST00000035307 K7ERJ3 54 aa9.28□□□□□ -0.92
CHPF2-201ENST00000035307 UBE2L6O14933 153 aa9.28□□□□□ -0.92
CHPF2-201ENST00000035307 IGF1P05019 195 aa9.28□□□□□ -0.92
CHPF2-201ENST00000035307 ANKRD39Q53RE8 183 aa9.28□□□□□ -0.92
CHPF2-201ENST00000035307 RPL39LQ96EH5 51 aaKnown RBP9.28□□□□□ -0.92
CHPF2-201ENST00000035307 AJUBAQ96IF1 538 aa9.28□□□□□ -0.92
CHPF2-201ENST00000035307 COL6A5A8TX70 2615 aa9.28□□□□□ -0.92
CHPF2-201ENST00000035307 KIR2DL5BA0A0G2JN68 375 aa9.28□□□□□ -0.92
CHPF2-201ENST00000035307 KIR2DL5BA0A0G2JPC4 375 aa9.28□□□□□ -0.92
CHPF2-201ENST00000035307 FAM223BA6NKX1 122 aa9.28□□□□□ -0.92
CHPF2-201ENST00000035307 ORMDL2Q53FV1 153 aa9.28□□□□□ -0.92
CHPF2-201ENST00000035307 FAM223AQ8IWN6 122 aa9.28□□□□□ -0.92
CHPF2-201ENST00000035307 KIR2DL5AQ8N109 375 aa9.28□□□□□ -0.92
CHPF2-201ENST00000035307 USMG5Q96IX5 58 aa9.28□□□□□ -0.92
CHPF2-201ENST00000035307 ZNF747Q9BV97 191 aa9.28□□□□□ -0.92
CHPF2-201ENST00000035307 BAHCC1Q9P281 2608 aa9.28□□□□□ -0.92
CHPF2-201ENST00000035307 TMEM238LA0A1B0GVL6 79 aa9.27□□□□□ -0.92
CHPF2-201ENST00000035307 A6NJY4 79 aa9.27□□□□□ -0.92
CHPF2-201ENST00000035307 LY6LH3BQJ8 138 aa9.27□□□□□ -0.92
CHPF2-201ENST00000035307 CD28P10747 220 aa9.27□□□□□ -0.92
CHPF2-201ENST00000035307 C19orf54Q5BKX5 351 aa9.27□□□□□ -0.92
CHPF2-201ENST00000035307 TCTEX1D4Q5JR98 221 aa9.27□□□□□ -0.92
CHPF2-201ENST00000035307 ZNF625Q96I27 306 aaPredicted RBP9.27□□□□□ -0.92
CHPF2-201ENST00000035307 VPREB3Q9UKI3 123 aa9.27□□□□□ -0.92
CHPF2-201ENST00000035307 TRGV1A0A0A0MS02 117 aa9.27□□□□□ -0.93
CHPF2-201ENST00000035307 FAM231BA6NCW3 169 aa9.27□□□□□ -0.93
CHPF2-201ENST00000035307 C2orf66Q6UXQ4 117 aa9.27□□□□□ -0.93
CHPF2-201ENST00000035307 COTL1Q14019 142 aa9.27□□□□□ -0.93
CHPF2-201ENST00000035307 NPBQ8NG41 125 aa9.27□□□□□ -0.93
CHPF2-201ENST00000035307 SMIM12Q96EX1 92 aa9.27□□□□□ -0.93
CHPF2-201ENST00000035307 COX11Q9Y6N1 276 aa9.27□□□□□ -0.93
CHPF2-201ENST00000035307 GATA3P23771 443 aa9.26□□□□□ -0.93
CHPF2-201ENST00000035307 TP53TG1Q9Y2A0 90 aa9.26□□□□□ -0.93
CHPF2-201ENST00000035307 INAFM1C9JVW0 142 aa9.25□□□□□ -0.93
CHPF2-201ENST00000035307 HSD52Q0P140 79 aa9.25□□□□□ -0.93
CHPF2-201ENST00000035307 SAMD5Q5TGI4 173 aa9.25□□□□□ -0.93
CHPF2-201ENST00000035307 ZNF479Q96JC4 524 aa9.25□□□□□ -0.93
CHPF2-201ENST00000035307 VWC2LB2RUY7 222 aa9.25□□□□□ -0.93
CHPF2-201ENST00000035307 SPXQ9BT56 116 aa9.25□□□□□ -0.93
CHPF2-201ENST00000035307 JPT2Q9H910 190 aa9.25□□□□□ -0.93
CHPF2-201ENST00000035307 CELSR1Q9NYQ6 3014 aa9.25□□□□□ -0.93
CHPF2-201ENST00000035307 CHAC1Q9BUX1 264 aa9.25□□□□□ -0.93
CHPF2-201ENST00000035307 C11orf68Q9H3H3 251 aaKnown RBP9.25□□□□□ -0.93
CHPF2-201ENST00000035307 KLF12Q9Y4X4 402 aa9.25□□□□□ -0.93
CHPF2-201ENST00000035307 NOTCH1P46531 2555 aa9.25□□□□□ -0.93
CHPF2-201ENST00000035307 RNASE1P07998 156 aaKnown RBP9.24□□□□□ -0.93
CHPF2-201ENST00000035307 UBE2V1Q13404 147 aa9.24□□□□□ -0.93
CHPF2-201ENST00000035307 C18orf65Q6ZTR6 163 aa9.24□□□□□ -0.93
CHPF2-201ENST00000035307 ADARB2-AS1A8MUL3 147 aa9.24□□□□□ -0.93
CHPF2-201ENST00000035307 PPP1R17O96001 155 aa9.24□□□□□ -0.93
CHPF2-201ENST00000035307 Q6ZQT7 251 aa9.24□□□□□ -0.93
CHPF2-201ENST00000035307 SDHAF1A6NFY7 115 aa9.24□□□□□ -0.93
CHPF2-201ENST00000035307 GAGE1Q13065 139 aa9.24□□□□□ -0.93
CHPF2-201ENST00000035307 MBD6Q96DN6 1003 aa9.24□□□□□ -0.93
CHPF2-201ENST00000035307 CCDC140Q96MF4 163 aa9.24□□□□□ -0.93
CHPF2-201ENST00000035307 PEMTQ9UBM1 199 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms