RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 CYB561D1Q8N8Q1 229 aa10.62□□□□□ -0.71
ERCC1-201ENST00000013807 GTSF1LQ9H1H1 148 aa10.62□□□□□ -0.71
ERCC1-201ENST00000013807 FLG2Q5D862 2391 aaPredicted RBP10.62□□□□□ -0.71
ERCC1-201ENST00000013807 INAFM2P0DMQ5 153 aa10.61□□□□□ -0.71
ERCC1-201ENST00000013807 ZFP69Q49AA0 526 aa10.61□□□□□ -0.71
ERCC1-201ENST00000013807 Q5VSD8 79 aa10.61□□□□□ -0.71
ERCC1-201ENST00000013807 TMEM70Q9BUB7 260 aa10.61□□□□□ -0.71
ERCC1-201ENST00000013807 ACTR3CQ9C0K3 210 aaPredicted RBP10.61□□□□□ -0.71
ERCC1-201ENST00000013807 LINC00694P0DN24 101 aa10.6□□□□□ -0.71
ERCC1-201ENST00000013807 OR10J3Q5JRS4 329 aa10.6□□□□□ -0.71
ERCC1-201ENST00000013807 ATP6V0E2Q8NHE4 81 aa10.6□□□□□ -0.71
ERCC1-201ENST00000013807 FRZBQ92765 325 aa10.6□□□□□ -0.71
ERCC1-201ENST00000013807 SH3BGRL3Q9H299 93 aa10.6□□□□□ -0.71
ERCC1-201ENST00000013807 IGKV3D-20A0A0C4DH25 116 aa10.59□□□□□ -0.71
ERCC1-201ENST00000013807 A8MWV9 139 aa10.59□□□□□ -0.71
ERCC1-201ENST00000013807 PSCAO43653 123 aa10.59□□□□□ -0.71
ERCC1-201ENST00000013807 PTTG1O95997 202 aa10.59□□□□□ -0.71
ERCC1-201ENST00000013807 DNLZQ5SXM8 178 aa10.59□□□□□ -0.71
ERCC1-201ENST00000013807 COX8CQ7Z4L0 72 aa10.59□□□□□ -0.71
ERCC1-201ENST00000013807 PRNTQ86SH4 94 aa10.59□□□□□ -0.71
ERCC1-201ENST00000013807 Q8N814 137 aa10.59□□□□□ -0.71
ERCC1-201ENST00000013807 VPS13BQ7Z7G8 4022 aa10.59□□□□□ -0.71
ERCC1-201ENST00000013807 HERC1Q15751 4861 aa10.58□□□□□ -0.72
ERCC1-201ENST00000013807 FABP5P3A8MUU1 101 aa10.58□□□□□ -0.72
ERCC1-201ENST00000013807 C1QBP02746 253 aa10.58□□□□□ -0.72
ERCC1-201ENST00000013807 Q5BKY6 102 aa10.58□□□□□ -0.72
ERCC1-201ENST00000013807 UFSP1Q6NVU6 142 aa10.58□□□□□ -0.72
ERCC1-201ENST00000013807 LINC00479Q96M42 142 aa10.58□□□□□ -0.72
ERCC1-201ENST00000013807 NKX6-2Q9C056 277 aaPredicted RBP10.58□□□□□ -0.72
ERCC1-201ENST00000013807 MED28Q9H204 178 aa10.58□□□□□ -0.72
ERCC1-201ENST00000013807 PARLQ9H300 379 aa10.58□□□□□ -0.72
ERCC1-201ENST00000013807 IGLV5-52A0A0A0MRZ9 124 aa10.57□□□□□ -0.72
ERCC1-201ENST00000013807 GIPP09681 153 aaPredicted RBP10.57□□□□□ -0.72
ERCC1-201ENST00000013807 Q6ZSN1 163 aa10.57□□□□□ -0.72
ERCC1-201ENST00000013807 BATF3Q9NR55 127 aa10.57□□□□□ -0.72
ERCC1-201ENST00000013807 IL36BQ9NZH7 164 aa10.57□□□□□ -0.72
ERCC1-201ENST00000013807 IGHV3-73A0A0B4J1V6 119 aa10.56□□□□□ -0.72
ERCC1-201ENST00000013807 CTXND1A0A1B0GTU2 59 aa10.56□□□□□ -0.72
ERCC1-201ENST00000013807 RNF222A6NCQ9 220 aa10.56□□□□□ -0.72
ERCC1-201ENST00000013807 ZNF726P1Q15940 193 aa10.56□□□□□ -0.72
ERCC1-201ENST00000013807 TM2D2Q9BX73 214 aa10.56□□□□□ -0.72
ERCC1-201ENST00000013807 ARL2-SNX15V9GYD0 113 aa10.56□□□□□ -0.72
ERCC1-201ENST00000013807 IGHV3-30P01768 117 aa10.55□□□□□ -0.72
ERCC1-201ENST00000013807 IGHV3-33P01772 117 aa10.55□□□□□ -0.72
ERCC1-201ENST00000013807 IGHV3-30-3P0DP02 117 aa10.55□□□□□ -0.72
ERCC1-201ENST00000013807 IGHV3-30-5P0DP03 117 aa10.55□□□□□ -0.72
ERCC1-201ENST00000013807 RPL7L1Q6DKI1 246 aaKnown RBP10.55□□□□□ -0.72
ERCC1-201ENST00000013807 INO80EQ8NBZ0 244 aaPredicted RBP10.55□□□□□ -0.72
ERCC1-201ENST00000013807 HIST1H2BAQ96A08 127 aa10.55□□□□□ -0.72
ERCC1-201ENST00000013807 A0A087WWC5 75 aa10.54□□□□□ -0.72
ERCC1-201ENST00000013807 SMR3BP02814 79 aaPredicted RBP10.54□□□□□ -0.72
ERCC1-201ENST00000013807 S100A4P26447 101 aaKnown RBP10.54□□□□□ -0.72
ERCC1-201ENST00000013807 CRIP1P50238 77 aa10.54□□□□□ -0.72
ERCC1-201ENST00000013807 FGF8P55075 233 aaPredicted RBP10.54□□□□□ -0.72
ERCC1-201ENST00000013807 Q9HAA7 133 aa10.54□□□□□ -0.72
ERCC1-201ENST00000013807 MYCBP2O75592 4640 aa10.54□□□□□ -0.72
ERCC1-201ENST00000013807 TRAV8-3A0A0A6YYJ7 113 aa10.53□□□□□ -0.72
ERCC1-201ENST00000013807 BORCS7-ASMTA0A0B4J1R7 106 aa10.53□□□□□ -0.72
ERCC1-201ENST00000013807 TRAV34A0A0B4J273 112 aa10.53□□□□□ -0.72
ERCC1-201ENST00000013807 FAM74A7A6NL05 159 aa10.53□□□□□ -0.72
ERCC1-201ENST00000013807 FAM229AH3BQW9 127 aa10.53□□□□□ -0.72
ERCC1-201ENST00000013807 PEX7O00628 323 aa10.53□□□□□ -0.72
ERCC1-201ENST00000013807 ASIPP42127 132 aa10.53□□□□□ -0.72
ERCC1-201ENST00000013807 Q6ZSA8 131 aa10.53□□□□□ -0.72
ERCC1-201ENST00000013807 Q9UF83 564 aa10.53□□□□□ -0.72
ERCC1-201ENST00000013807 ZFP30Q9Y2G7 519 aa10.53□□□□□ -0.72
ERCC1-201ENST00000013807 KRBOX1C9JBD0 128 aa10.52□□□□□ -0.73
ERCC1-201ENST00000013807 RHODO00212 210 aa10.52□□□□□ -0.73
ERCC1-201ENST00000013807 LGALSLQ3ZCW2 172 aaPredicted RBP10.52□□□□□ -0.73
ERCC1-201ENST00000013807 DMRTA1Q5VZB9 504 aa10.52□□□□□ -0.73
ERCC1-201ENST00000013807 Q86TA4 180 aa10.52□□□□□ -0.73
ERCC1-201ENST00000013807 SAMD10Q9BYL1 202 aa10.52□□□□□ -0.73
ERCC1-201ENST00000013807 TRBV6-1A0A0K0K1D8 114 aa10.51□□□□□ -0.73
ERCC1-201ENST00000013807 B4DEV8 164 aa10.51□□□□□ -0.73
ERCC1-201ENST00000013807 IFNA7P01567 189 aa10.51□□□□□ -0.73
ERCC1-201ENST00000013807 TOR2AQ5JU69 321 aa10.51□□□□□ -0.73
ERCC1-201ENST00000013807 TCEAL7Q9BRU2 100 aa10.51□□□□□ -0.73
ERCC1-201ENST00000013807 JPT2Q9H910 190 aa10.51□□□□□ -0.73
ERCC1-201ENST00000013807 FAM30AQ9NZY2 134 aa10.51□□□□□ -0.73
ERCC1-201ENST00000013807 COX11Q9Y6N1 276 aa10.51□□□□□ -0.73
ERCC1-201ENST00000013807 DNAH8Q96JB1 4490 aa10.5□□□□□ -0.73
ERCC1-201ENST00000013807 GAGE12JA6NER3 117 aa10.5□□□□□ -0.73
ERCC1-201ENST00000013807 G3V3Q6 166 aa10.5□□□□□ -0.73
ERCC1-201ENST00000013807 FHITP49789 147 aa10.5□□□□□ -0.73
ERCC1-201ENST00000013807 GAGE1Q13065 139 aa10.5□□□□□ -0.73
ERCC1-201ENST00000013807 GAGE4Q13068 117 aa10.5□□□□□ -0.73
ERCC1-201ENST00000013807 GAGE5Q13069 117 aa10.5□□□□□ -0.73
ERCC1-201ENST00000013807 WFDC2Q14508 124 aa10.5□□□□□ -0.73
ERCC1-201ENST00000013807 ZNF674Q2M3X9 581 aa10.5□□□□□ -0.73
ERCC1-201ENST00000013807 GAGE13Q4V321 117 aa10.5□□□□□ -0.73
ERCC1-201ENST00000013807 Q8N3U1 123 aa10.5□□□□□ -0.73
ERCC1-201ENST00000013807 C14orf178Q8N769 122 aaPredicted RBP10.5□□□□□ -0.73
ERCC1-201ENST00000013807 OR2T35Q8NGX2 323 aa10.5□□□□□ -0.73
ERCC1-201ENST00000013807 ZC2HC1AQ96GY0 325 aa10.5□□□□□ -0.73
ERCC1-201ENST00000013807 ARMS2P0C7Q2 107 aa10.49□□□□□ -0.73
ERCC1-201ENST00000013807 UBE2G2P60604 165 aa10.49□□□□□ -0.73
ERCC1-201ENST00000013807 LINC01559Q495D7 138 aa10.49□□□□□ -0.73
ERCC1-201ENST00000013807 DAZ4Q86SG3 579 aaKnown RBP10.49□□□□□ -0.73
ERCC1-201ENST00000013807 SYT8Q8NBV8 401 aa10.49□□□□□ -0.73
ERCC1-201ENST00000013807 SFRP2Q96HF1 295 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms