RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 COX8CQ7Z4L0 72 aa9.44□□□□□ -0.9
PHGDH-218ENST00000641491 MLST8Q9BVC4 326 aa9.44□□□□□ -0.9
PHGDH-218ENST00000641491 RPP21Q9H633 154 aaKnown RBP9.44□□□□□ -0.9
PHGDH-218ENST00000641491 TIMM8BQ9Y5J9 83 aaPredicted RBP9.44□□□□□ -0.9
PHGDH-218ENST00000641491 TRBV20OR9-2A0A075B6H5 130 aa9.43□□□□□ -0.9
PHGDH-218ENST00000641491 TEX48A0A1B0GUV7 120 aa9.43□□□□□ -0.9
PHGDH-218ENST00000641491 APOC3P02656 99 aa9.43□□□□□ -0.9
PHGDH-218ENST00000641491 EMP1P54849 157 aa9.43□□□□□ -0.9
PHGDH-218ENST00000641491 RPL23P62829 140 aaKnown RBP9.43□□□□□ -0.9
PHGDH-218ENST00000641491 ANXA2RQ3ZCQ2 193 aa9.43□□□□□ -0.9
PHGDH-218ENST00000641491 ZNF493Q6ZR52 646 aa9.43□□□□□ -0.9
PHGDH-218ENST00000641491 SLC7A5P1Q8MH63 180 aa9.43□□□□□ -0.9
PHGDH-218ENST00000641491 SVBPQ8N300 66 aa9.43□□□□□ -0.9
PHGDH-218ENST00000641491 TMEM263Q8WUH6 116 aaKnown RBP9.43□□□□□ -0.9
PHGDH-218ENST00000641491 SFRP2Q96HF1 295 aa9.43□□□□□ -0.9
PHGDH-218ENST00000641491 TPPP3Q9BW30 176 aa9.43□□□□□ -0.9
PHGDH-218ENST00000641491 ZNF324O75467 553 aaPredicted RBP9.42□□□□□ -0.9
PHGDH-218ENST00000641491 ZNF80P51504 273 aaPredicted RBP9.42□□□□□ -0.9
PHGDH-218ENST00000641491 LINC01559Q495D7 138 aa9.42□□□□□ -0.9
PHGDH-218ENST00000641491 ZNF705AQ6ZN79 300 aaPredicted RBP9.42□□□□□ -0.9
PHGDH-218ENST00000641491 C1orf158Q8N1D5 194 aa9.42□□□□□ -0.9
PHGDH-218ENST00000641491 OR10G8Q8NGN5 311 aa9.42□□□□□ -0.9
PHGDH-218ENST00000641491 ISOC2Q96AB3 205 aa9.42□□□□□ -0.9
PHGDH-218ENST00000641491 NEU1Q99519 415 aa9.42□□□□□ -0.9
PHGDH-218ENST00000641491 RNASE7Q9H1E1 156 aaKnown RBP9.42□□□□□ -0.9
PHGDH-218ENST00000641491 RETNQ9HD89 108 aa9.42□□□□□ -0.9
PHGDH-218ENST00000641491 A8MWL6 223 aa9.41□□□□□ -0.9
PHGDH-218ENST00000641491 K7EN84 100 aa9.41□□□□□ -0.9
PHGDH-218ENST00000641491 SNAPINO95295 136 aa9.41□□□□□ -0.9
PHGDH-218ENST00000641491 IGLV2-8P01709 118 aa9.41□□□□□ -0.9
PHGDH-218ENST00000641491 GIG44P09565 113 aaPredicted RBP9.41□□□□□ -0.9
PHGDH-218ENST00000641491 FAM231DQ6ZW35 169 aa9.41□□□□□ -0.9
PHGDH-218ENST00000641491 SYT8Q8NBV8 401 aa9.41□□□□□ -0.9
PHGDH-218ENST00000641491 CSNK1G2-AS1Q8NCQ2 148 aa9.41□□□□□ -0.9
PHGDH-218ENST00000641491 OVOL2Q9BRP0 275 aa9.41□□□□□ -0.9
PHGDH-218ENST00000641491 LINC00467Q9BRT7 94 aa9.41□□□□□ -0.9
PHGDH-218ENST00000641491 OSTCQ9NRP0 149 aa9.41□□□□□ -0.9
PHGDH-218ENST00000641491 TYMSP04818 313 aa9.4□□□□□ -0.9
PHGDH-218ENST00000641491 RPL19P84098 196 aaKnown RBP9.4□□□□□ -0.9
PHGDH-218ENST00000641491 NUDT10Q8NFP7 164 aa9.4□□□□□ -0.9
PHGDH-218ENST00000641491 ANAPC16Q96DE5 110 aa9.4□□□□□ -0.9
PHGDH-218ENST00000641491 NUDT11Q96G61 164 aa9.4□□□□□ -0.9
PHGDH-218ENST00000641491 TM2D3Q9BRN9 247 aa9.4□□□□□ -0.9
PHGDH-218ENST00000641491 PHLDA3Q9Y5J5 127 aa9.4□□□□□ -0.9
PHGDH-218ENST00000641491 IGHV4-28A0A0C4DH34 117 aa9.39□□□□□ -0.91
PHGDH-218ENST00000641491 A0A1W2PPQ1 181 aa9.39□□□□□ -0.91
PHGDH-218ENST00000641491 GRIFINA4D1Z8 144 aa9.39□□□□□ -0.91
PHGDH-218ENST00000641491 RBMY1A1P0DJD3 496 aaKnown RBP9.39□□□□□ -0.91
PHGDH-218ENST00000641491 RBMY1CP0DJD4 496 aa9.39□□□□□ -0.91
PHGDH-218ENST00000641491 S100PP25815 95 aa9.39□□□□□ -0.91
PHGDH-218ENST00000641491 RHEBQ15382 184 aa9.39□□□□□ -0.91
PHGDH-218ENST00000641491 RBMY1FQ15415 496 aaKnown RBP9.39□□□□□ -0.91
PHGDH-218ENST00000641491 TDRG1Q3Y452 100 aa9.39□□□□□ -0.91
PHGDH-218ENST00000641491 CT83Q5H943 113 aa9.39□□□□□ -0.91
PHGDH-218ENST00000641491 KCNIP4Q6PIL6 250 aa9.39□□□□□ -0.91
PHGDH-218ENST00000641491 SPXQ9BT56 116 aa9.39□□□□□ -0.91
PHGDH-218ENST00000641491 CARHSP1Q9Y2V2 147 aaKnown RBP9.39□□□□□ -0.91
PHGDH-218ENST00000641491 C19orf71A6NCJ1 209 aa9.38□□□□□ -0.91
PHGDH-218ENST00000641491 H3BVH4 76 aa9.38□□□□□ -0.91
PHGDH-218ENST00000641491 CXCL1P09341 107 aa9.38□□□□□ -0.91
PHGDH-218ENST00000641491 ADCYAP1P18509 176 aa9.38□□□□□ -0.91
PHGDH-218ENST00000641491 CRIP1P50238 77 aa9.38□□□□□ -0.91
PHGDH-218ENST00000641491 SPANXN1Q5VSR9 72 aa9.38□□□□□ -0.91
PHGDH-218ENST00000641491 SMIM15Q7Z3B0 74 aa9.38□□□□□ -0.91
PHGDH-218ENST00000641491 FER1L6-AS1Q8NA97 138 aa9.38□□□□□ -0.91
PHGDH-218ENST00000641491 RPS10P5Q9NQ39 176 aa9.38□□□□□ -0.91
PHGDH-218ENST00000641491 DNAH3Q8TD57 4116 aa9.37□□□□□ -0.91
PHGDH-218ENST00000641491 AGRNO00468 2067 aa9.37□□□□□ -0.91
PHGDH-218ENST00000641491 TRGV1A0A0A0MS02 117 aa9.37□□□□□ -0.91
PHGDH-218ENST00000641491 GNRH2O43555 120 aa9.37□□□□□ -0.91
PHGDH-218ENST00000641491 SPART-AS1P0CW21 52 aa9.37□□□□□ -0.91
PHGDH-218ENST00000641491 ZFP82Q8N141 532 aa9.37□□□□□ -0.91
PHGDH-218ENST00000641491 CTDSP1Q9GZU7 261 aa9.37□□□□□ -0.91
PHGDH-218ENST00000641491 C11orf68Q9H3H3 251 aaKnown RBP9.37□□□□□ -0.91
PHGDH-218ENST00000641491 NOP10Q9NPE3 64 aaKnown RBP9.37□□□□□ -0.91
PHGDH-218ENST00000641491 GSN-AS1Q9NRJ2 163 aa9.37□□□□□ -0.91
PHGDH-218ENST00000641491 X6R8D5 127 aa9.37□□□□□ -0.91
PHGDH-218ENST00000641491 TRGV2A0A075B6R0 118 aa9.36□□□□□ -0.91
PHGDH-218ENST00000641491 IGKV3D-20A0A0C4DH25 116 aa9.36□□□□□ -0.91
PHGDH-218ENST00000641491 IGHV3-16A0A0C4DH30 117 aa9.36□□□□□ -0.91
PHGDH-218ENST00000641491 CXorf65A6NEN9 183 aa9.36□□□□□ -0.91
PHGDH-218ENST00000641491 LYRM9A8MSI8 78 aa9.36□□□□□ -0.91
PHGDH-218ENST00000641491 F2Z2F3 143 aa9.36□□□□□ -0.91
PHGDH-218ENST00000641491 DEFB4AO15263 64 aa9.36□□□□□ -0.91
PHGDH-218ENST00000641491 SMIM17P0DL12 118 aa9.36□□□□□ -0.91
PHGDH-218ENST00000641491 MED14OSP0DP75 135 aa9.36□□□□□ -0.91
PHGDH-218ENST00000641491 TCL1AP56279 114 aa9.36□□□□□ -0.91
PHGDH-218ENST00000641491 RNF212Q495C1 297 aa9.36□□□□□ -0.91
PHGDH-218ENST00000641491 Q6ZQT7 251 aa9.36□□□□□ -0.91
PHGDH-218ENST00000641491 CLRN3Q8NCR9 226 aa9.36□□□□□ -0.91
PHGDH-218ENST00000641491 RNASE8Q8TDE3 154 aaKnown RBP9.36□□□□□ -0.91
PHGDH-218ENST00000641491 TSKUQ8WUA8 353 aa9.36□□□□□ -0.91
PHGDH-218ENST00000641491 NAT8BQ9UHF3 227 aa9.36□□□□□ -0.91
PHGDH-218ENST00000641491 TP53TG3Q9ULZ0 132 aa9.36□□□□□ -0.91
PHGDH-218ENST00000641491 U3KQK5 164 aa9.36□□□□□ -0.91
PHGDH-218ENST00000641491 A0A0J9YWU9 116 aa9.35□□□□□ -0.91
PHGDH-218ENST00000641491 M0R2P5 195 aa9.35□□□□□ -0.91
PHGDH-218ENST00000641491 ARMS2P0C7Q2 107 aa9.35□□□□□ -0.91
PHGDH-218ENST00000641491 AZU1P20160 251 aa9.35□□□□□ -0.91
PHGDH-218ENST00000641491 DAD1P61803 113 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms