RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 SGK494Q96LW2 274 aa9.48□□□□□ -0.89
LINC00339-211ENST00000641009 TREM1Q9NP99 234 aa9.48□□□□□ -0.89
LINC00339-211ENST00000641009 TRAV4A0A0B4J268 109 aa9.47□□□□□ -0.89
LINC00339-211ENST00000641009 M0R2P5 195 aa9.47□□□□□ -0.89
LINC00339-211ENST00000641009 FUSP35637 526 aaKnown RBP eCLIP9.47□□□□□ -0.89
LINC00339-211ENST00000641009 CDC34P49427 236 aaPredicted RBP9.47□□□□□ -0.89
LINC00339-211ENST00000641009 WFDC10BQ8IUB3 73 aa9.47□□□□□ -0.89
LINC00339-211ENST00000641009 ARL6IP6Q8N6S5 226 aa9.47□□□□□ -0.89
LINC00339-211ENST00000641009 HSD17B11Q8NBQ5 300 aa9.47□□□□□ -0.89
LINC00339-211ENST00000641009 PCNPQ8WW12 178 aaKnown RBP9.47□□□□□ -0.89
LINC00339-211ENST00000641009 STAG3L2P0CL84 134 aa9.47□□□□□ -0.89
LINC00339-211ENST00000641009 STAG3L3P0CL85 134 aa9.47□□□□□ -0.89
LINC00339-211ENST00000641009 OR4C5Q8NGB2 326 aa9.47□□□□□ -0.89
LINC00339-211ENST00000641009 LY96Q9Y6Y9 160 aa9.47□□□□□ -0.89
LINC00339-211ENST00000641009 LOC100131303A0A0U1RQF7 123 aa9.46□□□□□ -0.9
LINC00339-211ENST00000641009 ORM1P02763 201 aa9.46□□□□□ -0.9
LINC00339-211ENST00000641009 ATP6V0CP27449 155 aa9.46□□□□□ -0.9
LINC00339-211ENST00000641009 OR2G3Q8NGZ4 309 aa9.46□□□□□ -0.9
LINC00339-211ENST00000641009 RAB24Q969Q5 203 aa9.46□□□□□ -0.9
LINC00339-211ENST00000641009 SDF2L1Q9HCN8 221 aa9.46□□□□□ -0.9
LINC00339-211ENST00000641009 C9JCJ5 164 aa9.45□□□□□ -0.9
LINC00339-211ENST00000641009 GCHFRP30047 84 aa9.45□□□□□ -0.9
LINC00339-211ENST00000641009 ZNF80P51504 273 aaPredicted RBP9.45□□□□□ -0.9
LINC00339-211ENST00000641009 ASB13Q8WXK3 278 aa9.45□□□□□ -0.9
LINC00339-211ENST00000641009 AQP10Q96PS8 301 aa9.45□□□□□ -0.9
LINC00339-211ENST00000641009 PSMG3Q9BT73 122 aaPredicted RBP9.45□□□□□ -0.9
LINC00339-211ENST00000641009 SH3BGRL3Q9H299 93 aa9.45□□□□□ -0.9
LINC00339-211ENST00000641009 TRAV9-2A0A087WT02 112 aa9.44□□□□□ -0.9
LINC00339-211ENST00000641009 TCRAP04437 139 aa9.44□□□□□ -0.9
LINC00339-211ENST00000641009 DNAH10OSP0CZ25 163 aa9.44□□□□□ -0.9
LINC00339-211ENST00000641009 ERVFC1-1P60608 527 aa9.44□□□□□ -0.9
LINC00339-211ENST00000641009 Q5BKY6 102 aa9.44□□□□□ -0.9
LINC00339-211ENST00000641009 Q8N1X5 172 aa9.44□□□□□ -0.9
LINC00339-211ENST00000641009 C5orf17Q8NAS9 161 aa9.44□□□□□ -0.9
LINC00339-211ENST00000641009 SUN5Q8TC36 379 aa9.44□□□□□ -0.9
LINC00339-211ENST00000641009 KCNS1Q96KK3 526 aa9.44□□□□□ -0.9
LINC00339-211ENST00000641009 TXNDC17Q9BRA2 123 aa9.44□□□□□ -0.9
LINC00339-211ENST00000641009 NDFIP1Q9BT67 221 aa9.44□□□□□ -0.9
LINC00339-211ENST00000641009 MED28Q9H204 178 aa9.44□□□□□ -0.9
LINC00339-211ENST00000641009 C11orf21Q9P2W6 132 aa9.44□□□□□ -0.9
LINC00339-211ENST00000641009 SERTM2A0A1B0GWG4 89 aa9.43□□□□□ -0.9
LINC00339-211ENST00000641009 PTTG1O95997 202 aa9.43□□□□□ -0.9
LINC00339-211ENST00000641009 NFE4Q86UQ8 179 aa9.43□□□□□ -0.9
LINC00339-211ENST00000641009 TMEM75Q8N9X5 138 aa9.43□□□□□ -0.9
LINC00339-211ENST00000641009 SCRT2Q9NQ03 307 aa9.43□□□□□ -0.9
LINC00339-211ENST00000641009 PSG8Q9UQ74 426 aa9.43□□□□□ -0.9
LINC00339-211ENST00000641009 GGTLC3B5MD39 225 aa9.42□□□□□ -0.9
LINC00339-211ENST00000641009 EREGO14944 169 aa9.42□□□□□ -0.9
LINC00339-211ENST00000641009 IGLV2-11P01706 119 aa9.42□□□□□ -0.9
LINC00339-211ENST00000641009 GATA1P15976 413 aaPredicted RBP9.42□□□□□ -0.9
LINC00339-211ENST00000641009 EVI2AP22794 236 aa9.42□□□□□ -0.9
LINC00339-211ENST00000641009 SUMO1P63165 101 aaKnown RBP9.42□□□□□ -0.9
LINC00339-211ENST00000641009 SERF2P84101 59 aa9.42□□□□□ -0.9
LINC00339-211ENST00000641009 ZNF876PQ49A33 203 aa9.42□□□□□ -0.9
LINC00339-211ENST00000641009 NHLRC2Q8NBF2 726 aa9.42□□□□□ -0.9
LINC00339-211ENST00000641009 PGPEP1Q9NXJ5 209 aa9.42□□□□□ -0.9
LINC00339-211ENST00000641009 MSRB1Q9NZV6 116 aa9.42□□□□□ -0.9
LINC00339-211ENST00000641009 K7EQM0 130 aa9.41□□□□□ -0.9
LINC00339-211ENST00000641009 CXorf1O96002 111 aa9.41□□□□□ -0.9
LINC00339-211ENST00000641009 GCGP01275 180 aa9.41□□□□□ -0.9
LINC00339-211ENST00000641009 MBP02144 154 aa9.41□□□□□ -0.9
LINC00339-211ENST00000641009 DPPA3Q6W0C5 159 aa9.41□□□□□ -0.9
LINC00339-211ENST00000641009 PRNTQ86SH4 94 aa9.41□□□□□ -0.9
LINC00339-211ENST00000641009 FAT1Q14517 4588 aa9.4□□□□□ -0.9
LINC00339-211ENST00000641009 A0A087WTM6 91 aa9.4□□□□□ -0.9
LINC00339-211ENST00000641009 FBLL1A6NHQ2 334 aaKnown RBP9.4□□□□□ -0.9
LINC00339-211ENST00000641009 TAAR5O14804 337 aa9.4□□□□□ -0.9
LINC00339-211ENST00000641009 CRYGDP07320 174 aa9.4□□□□□ -0.9
LINC00339-211ENST00000641009 PFN1P07737 140 aaKnown RBP9.4□□□□□ -0.9
LINC00339-211ENST00000641009 PPT1P50897 306 aa9.4□□□□□ -0.9
LINC00339-211ENST00000641009 FLI1Q01543 452 aaPredicted RBP9.4□□□□□ -0.9
LINC00339-211ENST00000641009 CFAP126Q5VTH2 177 aa9.4□□□□□ -0.9
LINC00339-211ENST00000641009 SLC25A29Q8N8R3 303 aa9.4□□□□□ -0.9
LINC00339-211ENST00000641009 ACTR3CQ9C0K3 210 aaPredicted RBP9.4□□□□□ -0.9
LINC00339-211ENST00000641009 TMEM167BQ9NRX6 74 aa9.4□□□□□ -0.9
LINC00339-211ENST00000641009 EPDR1Q9UM22 224 aa9.4□□□□□ -0.9
LINC00339-211ENST00000641009 IGHV3-73A0A0B4J1V6 119 aa9.4□□□□□ -0.91
LINC00339-211ENST00000641009 RNF222A6NCQ9 220 aa9.4□□□□□ -0.91
LINC00339-211ENST00000641009 K7EP13 123 aa9.4□□□□□ -0.91
LINC00339-211ENST00000641009 RS1O15537 224 aa9.4□□□□□ -0.91
LINC00339-211ENST00000641009 GIPP09681 153 aaPredicted RBP9.4□□□□□ -0.91
LINC00339-211ENST00000641009 ZFP69Q49AA0 526 aa9.4□□□□□ -0.91
LINC00339-211ENST00000641009 SMUG1Q53HV7 270 aa9.4□□□□□ -0.91
LINC00339-211ENST00000641009 RPL7L1Q6DKI1 246 aaKnown RBP9.4□□□□□ -0.91
LINC00339-211ENST00000641009 SH2D6Q7Z4S9 175 aa9.4□□□□□ -0.91
LINC00339-211ENST00000641009 CYB561D1Q8N8Q1 229 aa9.4□□□□□ -0.91
LINC00339-211ENST00000641009 C9orf85Q96MD7 179 aa9.4□□□□□ -0.91
LINC00339-211ENST00000641009 TNFSF18Q9UNG2 199 aa9.4□□□□□ -0.91
LINC00339-211ENST00000641009 FXYD6-FXYD2A0A087WZ82 144 aa9.39□□□□□ -0.91
LINC00339-211ENST00000641009 PGPEP1LA6NFU8 196 aa9.39□□□□□ -0.91
LINC00339-211ENST00000641009 ZNF726P1Q15940 193 aa9.39□□□□□ -0.91
LINC00339-211ENST00000641009 ZNF506Q5JVG8 444 aa9.39□□□□□ -0.91
LINC00339-211ENST00000641009 CDPF1Q6NVV7 123 aa9.39□□□□□ -0.91
LINC00339-211ENST00000641009 INO80EQ8NBZ0 244 aaPredicted RBP9.39□□□□□ -0.91
LINC00339-211ENST00000641009 LINC00479Q96M42 142 aa9.39□□□□□ -0.91
LINC00339-211ENST00000641009 TRAV34A0A0B4J273 112 aa9.38□□□□□ -0.91
LINC00339-211ENST00000641009 IGHV3-38A0A0C4DH36 116 aa9.38□□□□□ -0.91
LINC00339-211ENST00000641009 RNASE3P12724 160 aaKnown RBP9.38□□□□□ -0.91
LINC00339-211ENST00000641009 TIRAPP58753 221 aa9.38□□□□□ -0.91
LINC00339-211ENST00000641009 C10orf126Q8N4M7 172 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms