RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 OR10J4P0C629 311 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 OR4E1P0C645 316 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 PYYP10082 97 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 BCL2P10415 239 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 NEFHP12036 1026 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 IL7P13232 177 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 IDO1P14902 403 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 FABP4P15090 132 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 S100A4P26447 101 aaKnown RBP-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 ERP29P30040 261 aaKnown RBP-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 CAPZBP47756 277 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 RAB5CP51148 216 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 CDC42P60953 191 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 YPEL3P61236 119 aaPredicted RBP-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 RPS29P62273 56 aaKnown RBP-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 ARF6P62330 175 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 RPS28P62857 69 aaKnown RBP-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 UBE2BP63146 152 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 DYNLT1P63172 113 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 MYL5Q02045 173 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 SSBP1Q04837 148 aaKnown RBP-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 AESQ08117 197 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 MIR22HGQ0VDD5 57 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 OR2F1Q13607 317 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 DIAPH2-AS1Q14236 149 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 POU6F1Q14863 301 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 TSNQ15631 228 aaKnown RBP-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 IAH1Q2TAA2 248 aaPredicted RBP-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 VMA21Q3ZAQ7 101 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 AKR1C8PQ5T2L2 129 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 C1orf134Q5TEV5 83 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 LRRN1Q6UXK5 716 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 HEPN1Q6WQI6 88 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 ATP11AUNQ6ZP68 121 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 GOLT1AQ6ZVE7 132 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 BAGE3Q86Y29 109 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 TCTEX1D1Q8N7M0 179 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 OR4B1Q8NGF8 309 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 OR8J3Q8NGG0 315 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 OR4K15Q8NH41 348 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 VSTM2AQ8TAG5 236 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 SLC25A40Q8TBP6 338 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 CT55Q8WUE5 264 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 CHCHD1Q96BP2 118 aaKnown RBP-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 SLAMF6Q96DU3 332 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 ZHX1-C8orf76Q96EF9 292 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 DMAC1Q96GE9 116 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 SPRR4Q96PI1 79 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 GPX7Q96SL4 187 aaPredicted RBP-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 SIGMAR1Q99720 223 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 HIST1H2BLQ99880 126 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 SELENOSQ9BQE4 189 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 LINC00467Q9BRT7 94 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 LXNQ9BS40 222 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 PRADC1Q9BSG0 188 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 PBDC1Q9BVG4 233 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 MED11Q9P086 117 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 COMMD3Q9UBI1 195 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 LAMTOR3Q9UHA4 124 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 ERGIC3Q9Y282 383 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 TAF1LQ8IZX4 1826 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 POLA1P09884 1462 aaPredicted RBP-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 MAGI1Q96QZ7 1491 aaPredicted RBP-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 BCORL1Q5H9F3 1711 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 KNDC1Q76NI1 1749 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 BLMP54132 1417 aaPredicted RBP-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 NSD3Q9BZ95 1437 aa-0.3□□□□□ -2.46
CCDC7-211ENST00000638889 CPDO75976 1380 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 SBF1O95248 1867 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 TRGV10A0A0A0MS01 117 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 TRAV1-2A0A0B4J238 106 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 TRBV10-1A0A0K0K1A3 114 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 CTXND1A0A1B0GTU2 59 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 hADV38S2A0JD32 116 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 hDV103S1A0JD37 113 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 CLDN24A6NM45 220 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 C1orf196B1AJZ1 125 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 C5orf58C9J3I9 102 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 I3L3M4 83 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 CCL22O00626 93 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 KPNA4O00629 521 aaPredicted RBP-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 NDUFB3O43676 98 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 ATP5HO75947 161 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 LYPLA2O95372 231 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 TFF1P04155 84 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 MGPP08493 103 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 RPS17P08708 135 aaKnown RBP-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 TNP1P09430 55 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 COX5BP10606 129 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 PIPP12273 146 aaPredicted RBP-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 CYBAP13498 195 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 CCL3L1P16619 93 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 CMPK1P30085 196 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 SRP14P37108 136 aaKnown RBP-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 RPL5P46777 297 aaKnown RBP-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 POLR2JP52435 117 aaKnown RBP-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 BLVRAP53004 296 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 DNAJB13P59910 316 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 HIST1H3AP68431 136 aa-0.31□□□□□ -2.46
CCDC7-211ENST00000638889 PRLHP81277 87 aa-0.31□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms