RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 LOC100131303A0A0U1RQF7 123 aa11.4□□□□□ -0.58
SMN2-216ENST00000638794 F6UZH7 168 aa11.4□□□□□ -0.58
SMN2-216ENST00000638794 K7EP13 123 aa11.4□□□□□ -0.58
SMN2-216ENST00000638794 TYMSP04818 313 aa11.4□□□□□ -0.58
SMN2-216ENST00000638794 XGP55808 180 aa11.4□□□□□ -0.58
SMN2-216ENST00000638794 FAM74A1Q5RGS3 127 aa11.4□□□□□ -0.58
SMN2-216ENST00000638794 TVP23CQ96ET8 276 aa11.4□□□□□ -0.58
SMN2-216ENST00000638794 TRAV21A0A0B4J279 112 aa11.39□□□□□ -0.59
SMN2-216ENST00000638794 KRTAP10-1P60331 282 aa11.39□□□□□ -0.59
SMN2-216ENST00000638794 RAB2AP61019 212 aa11.39□□□□□ -0.59
SMN2-216ENST00000638794 ACOT6Q3I5F7 207 aaPredicted RBP11.39□□□□□ -0.59
SMN2-216ENST00000638794 PQLC2Q6ZP29 291 aa11.39□□□□□ -0.59
SMN2-216ENST00000638794 A0A1W2PPV4 95 aa11.38□□□□□ -0.59
SMN2-216ENST00000638794 HMGB3O15347 200 aaKnown RBP11.38□□□□□ -0.59
SMN2-216ENST00000638794 CRYGDP07320 174 aa11.38□□□□□ -0.59
SMN2-216ENST00000638794 GNG5P63218 68 aa11.38□□□□□ -0.59
SMN2-216ENST00000638794 ARL6IP6Q8N6S5 226 aa11.38□□□□□ -0.59
SMN2-216ENST00000638794 TREM1Q9NP99 234 aa11.38□□□□□ -0.59
SMN2-216ENST00000638794 GATA1P15976 413 aaPredicted RBP11.37□□□□□ -0.59
SMN2-216ENST00000638794 NHLRC2Q8NBF2 726 aa11.37□□□□□ -0.59
SMN2-216ENST00000638794 SDF2L1Q9HCN8 221 aa11.37□□□□□ -0.59
SMN2-216ENST00000638794 VPS13BQ7Z7G8 4022 aa11.37□□□□□ -0.59
SMN2-216ENST00000638794 C10orf126Q8N4M7 172 aa11.36□□□□□ -0.59
SMN2-216ENST00000638794 ASB13Q8WXK3 278 aa11.36□□□□□ -0.59
SMN2-216ENST00000638794 KCNS1Q96KK3 526 aa11.36□□□□□ -0.59
SMN2-216ENST00000638794 SGK494Q96LW2 274 aa11.36□□□□□ -0.59
SMN2-216ENST00000638794 ARL14EPLP0DKL9 152 aa11.35□□□□□ -0.59
SMN2-216ENST00000638794 SH2D6Q7Z4S9 175 aa11.35□□□□□ -0.59
SMN2-216ENST00000638794 OR10G9Q8NGN4 311 aa11.35□□□□□ -0.59
SMN2-216ENST00000638794 OR10G7Q8NGN6 311 aa11.35□□□□□ -0.59
SMN2-216ENST00000638794 DNAH8Q96JB1 4490 aa11.34□□□□□ -0.59
SMN2-216ENST00000638794 IGHV3-38A0A0C4DH36 116 aa11.34□□□□□ -0.59
SMN2-216ENST00000638794 FBLL1A6NHQ2 334 aaKnown RBP11.34□□□□□ -0.59
SMN2-216ENST00000638794 PPT1P50897 306 aa11.34□□□□□ -0.59
SMN2-216ENST00000638794 TIRAPP58753 221 aa11.34□□□□□ -0.59
SMN2-216ENST00000638794 DEFA1P59665 94 aa11.34□□□□□ -0.59
SMN2-216ENST00000638794 DEFA3P59666 94 aa11.34□□□□□ -0.59
SMN2-216ENST00000638794 Q5VSD8 79 aa11.34□□□□□ -0.59
SMN2-216ENST00000638794 SLC25A29Q8N8R3 303 aa11.34□□□□□ -0.59
SMN2-216ENST00000638794 MYCBP2O75592 4640 aa11.34□□□□□ -0.59
SMN2-216ENST00000638794 DMBT1Q9UGM3 2413 aaPredicted RBP11.33□□□□□ -0.6
SMN2-216ENST00000638794 A6NHS1 94 aa11.33□□□□□ -0.6
SMN2-216ENST00000638794 GCSHP23434 173 aa11.33□□□□□ -0.6
SMN2-216ENST00000638794 CDC34P49427 236 aaPredicted RBP11.33□□□□□ -0.6
SMN2-216ENST00000638794 ZNF80P51504 273 aaPredicted RBP11.33□□□□□ -0.6
SMN2-216ENST00000638794 ZNF876PQ49A33 203 aa11.33□□□□□ -0.6
SMN2-216ENST00000638794 DPPA3Q6W0C5 159 aa11.33□□□□□ -0.6
SMN2-216ENST00000638794 NDFIP1Q9BT67 221 aa11.33□□□□□ -0.6
SMN2-216ENST00000638794 C11orf21Q9P2W6 132 aa11.33□□□□□ -0.6
SMN2-216ENST00000638794 TCRAP04437 139 aa11.32□□□□□ -0.6
SMN2-216ENST00000638794 STAG3L2P0CL84 134 aa11.32□□□□□ -0.6
SMN2-216ENST00000638794 STAG3L3P0CL85 134 aa11.32□□□□□ -0.6
SMN2-216ENST00000638794 INAFM2P0DMQ5 153 aa11.32□□□□□ -0.6
SMN2-216ENST00000638794 LINC01556Q5JQF7 62 aa11.32□□□□□ -0.6
SMN2-216ENST00000638794 CFAP126Q5VTH2 177 aa11.32□□□□□ -0.6
SMN2-216ENST00000638794 C5orf17Q8NAS9 161 aa11.32□□□□□ -0.6
SMN2-216ENST00000638794 SERTM2A0A1B0GWG4 89 aa11.31□□□□□ -0.6
SMN2-216ENST00000638794 RS1O15537 224 aa11.31□□□□□ -0.6
SMN2-216ENST00000638794 PSCAO43653 123 aa11.31□□□□□ -0.6
SMN2-216ENST00000638794 GCGP01275 180 aa11.31□□□□□ -0.6
SMN2-216ENST00000638794 PFN1P07737 140 aaKnown RBP11.31□□□□□ -0.6
SMN2-216ENST00000638794 TMEM75Q8N9X5 138 aa11.31□□□□□ -0.6
SMN2-216ENST00000638794 HSD17B11Q8NBQ5 300 aa11.31□□□□□ -0.6
SMN2-216ENST00000638794 OR2G3Q8NGZ4 309 aa11.31□□□□□ -0.6
SMN2-216ENST00000638794 FRZBQ92765 325 aa11.31□□□□□ -0.6
SMN2-216ENST00000638794 IGHV3-73A0A0B4J1V6 119 aa11.3□□□□□ -0.6
SMN2-216ENST00000638794 TRAV8-6A0A0B4J262 113 aa11.3□□□□□ -0.6
SMN2-216ENST00000638794 LRCOL1A6NCL2 159 aa11.3□□□□□ -0.6
SMN2-216ENST00000638794 IBA57-AS1B1ANH7 110 aa11.3□□□□□ -0.6
SMN2-216ENST00000638794 GCHFRP30047 84 aa11.3□□□□□ -0.6
SMN2-216ENST00000638794 RHOHQ15669 191 aa11.3□□□□□ -0.6
SMN2-216ENST00000638794 OR10J3Q5JRS4 329 aa11.3□□□□□ -0.6
SMN2-216ENST00000638794 SUN5Q8TC36 379 aa11.3□□□□□ -0.6
SMN2-216ENST00000638794 RAB24Q969Q5 203 aa11.3□□□□□ -0.6
SMN2-216ENST00000638794 C9orf85Q96MD7 179 aa11.3□□□□□ -0.6
SMN2-216ENST00000638794 PRADC1Q9BSG0 188 aa11.3□□□□□ -0.6
SMN2-216ENST00000638794 PSG8Q9UQ74 426 aa11.3□□□□□ -0.6
SMN2-216ENST00000638794 SRRM2Q9UQ35 2752 aaKnown RBP11.29□□□□□ -0.6
SMN2-216ENST00000638794 IGLV5-52A0A0A0MRZ9 124 aa11.29□□□□□ -0.6
SMN2-216ENST00000638794 TRBV6-4A0A1B0GX49 114 aa11.29□□□□□ -0.6
SMN2-216ENST00000638794 TAAR5O14804 337 aa11.29□□□□□ -0.6
SMN2-216ENST00000638794 IGLV2-11P01706 119 aa11.29□□□□□ -0.6
SMN2-216ENST00000638794 SMR3BP02814 79 aaPredicted RBP11.29□□□□□ -0.6
SMN2-216ENST00000638794 HAMPP81172 84 aa11.29□□□□□ -0.6
SMN2-216ENST00000638794 Q9HAA7 133 aa11.29□□□□□ -0.6
SMN2-216ENST00000638794 ALG5Q9Y673 324 aa11.29□□□□□ -0.6
SMN2-216ENST00000638794 GGTLC3B5MD39 225 aa11.28□□□□□ -0.6
SMN2-216ENST00000638794 K7EQM0 130 aa11.28□□□□□ -0.6
SMN2-216ENST00000638794 CIDEAO60543 219 aa11.28□□□□□ -0.6
SMN2-216ENST00000638794 ATP6V0CP27449 155 aa11.28□□□□□ -0.6
SMN2-216ENST00000638794 FLI1Q01543 452 aaPredicted RBP11.28□□□□□ -0.6
SMN2-216ENST00000638794 ZNF506Q5JVG8 444 aa11.28□□□□□ -0.6
SMN2-216ENST00000638794 PSMG3Q9BT73 122 aaPredicted RBP11.28□□□□□ -0.6
SMN2-216ENST00000638794 PGPEP1LA6NFU8 196 aa11.27□□□□□ -0.61
SMN2-216ENST00000638794 IGHV3-30P01768 117 aa11.27□□□□□ -0.61
SMN2-216ENST00000638794 IGHV3-33P01772 117 aa11.27□□□□□ -0.61
SMN2-216ENST00000638794 IGHV3-30-3P0DP02 117 aa11.27□□□□□ -0.61
SMN2-216ENST00000638794 IGHV3-30-5P0DP03 117 aa11.27□□□□□ -0.61
SMN2-216ENST00000638794 RNASE3P12724 160 aaKnown RBP11.27□□□□□ -0.61
SMN2-216ENST00000638794 SUMO1P63165 101 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms