RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 F6UB75 175 aa13.03□□□□□ -0.32
SCARB2-210ENST00000638567 CTSGP08311 255 aa13.03□□□□□ -0.32
SCARB2-210ENST00000638567 KLK9Q9UKQ9 250 aa13.03□□□□□ -0.32
SCARB2-210ENST00000638567 NDUFA4O00483 81 aa13.03□□□□□ -0.32
SCARB2-210ENST00000638567 AMTNQ6UX39 209 aa13.03□□□□□ -0.32
SCARB2-210ENST00000638567 PHLDA1Q8WV24 401 aaPredicted RBP13.03□□□□□ -0.32
SCARB2-210ENST00000638567 DEFB131AP59861 70 aa13.02□□□□□ -0.32
SCARB2-210ENST00000638567 ANAPC13Q9BS18 74 aa13.02□□□□□ -0.32
SCARB2-210ENST00000638567 IGHV7-81A0A0B4J1V7 117 aa13.02□□□□□ -0.33
SCARB2-210ENST00000638567 MSMBP08118 114 aa13.02□□□□□ -0.33
SCARB2-210ENST00000638567 TRAV12-2A0A075B6T6 113 aa13.02□□□□□ -0.33
SCARB2-210ENST00000638567 HLA-DRB4P13762 266 aa13.02□□□□□ -0.33
SCARB2-210ENST00000638567 PMVKQ15126 192 aa13.02□□□□□ -0.33
SCARB2-210ENST00000638567 HLA-DRB4X5D2U9 266 aa13.02□□□□□ -0.33
SCARB2-210ENST00000638567 TRGV1A0A0A0MS02 117 aa13.02□□□□□ -0.33
SCARB2-210ENST00000638567 IGHV3-53P01767 116 aa13.02□□□□□ -0.33
SCARB2-210ENST00000638567 ZNF415Q09FC8 603 aa13.02□□□□□ -0.33
SCARB2-210ENST00000638567 LINC00322Q6ZN03 302 aaPredicted RBP13.02□□□□□ -0.33
SCARB2-210ENST00000638567 TIMM21Q9BVV7 248 aa13.02□□□□□ -0.33
SCARB2-210ENST00000638567 TRGV4A0A0C4DH28 118 aa13.01□□□□□ -0.33
SCARB2-210ENST00000638567 CRYGCP07315 174 aa13.01□□□□□ -0.33
SCARB2-210ENST00000638567 C9JAW5 83 aa13.01□□□□□ -0.33
SCARB2-210ENST00000638567 H3BMG7 143 aa13.01□□□□□ -0.33
SCARB2-210ENST00000638567 HCFC1P51610 2035 aa13.01□□□□□ -0.33
SCARB2-210ENST00000638567 SIVA1O15304 175 aa13.01□□□□□ -0.33
SCARB2-210ENST00000638567 C1orf159Q96HA4 380 aa13.01□□□□□ -0.33
SCARB2-210ENST00000638567 C1orf122Q6ZSJ8 110 aa13□□□□□ -0.33
SCARB2-210ENST00000638567 C22orf34Q6ZV56 151 aa13□□□□□ -0.33
SCARB2-210ENST00000638567 TRPT1Q86TN4 253 aaKnown RBP13□□□□□ -0.33
SCARB2-210ENST00000638567 CCDC168Q8NDH2 2452 aa13□□□□□ -0.33
SCARB2-210ENST00000638567 NACAE9PAV3 2078 aa13□□□□□ -0.33
SCARB2-210ENST00000638567 TRAV8-4A0A0B4J246 113 aa13□□□□□ -0.33
SCARB2-210ENST00000638567 DSCR9P59020 149 aa13□□□□□ -0.33
SCARB2-210ENST00000638567 CEND1Q8N111 149 aa13□□□□□ -0.33
SCARB2-210ENST00000638567 LY6G5BQ8NDX9 201 aa13□□□□□ -0.33
SCARB2-210ENST00000638567 UBE2E2Q96LR5 201 aa13□□□□□ -0.33
SCARB2-210ENST00000638567 C19orf71A6NCJ1 209 aa13□□□□□ -0.33
SCARB2-210ENST00000638567 C2orf70A6NJV1 201 aa13□□□□□ -0.33
SCARB2-210ENST00000638567 HOXB4P17483 251 aaPredicted RBP13□□□□□ -0.33
SCARB2-210ENST00000638567 GDF5OSQ5U4N7 250 aa13□□□□□ -0.33
SCARB2-210ENST00000638567 MAPK1IP1LQ8NDC0 245 aa13□□□□□ -0.33
SCARB2-210ENST00000638567 RNASE8Q8TDE3 154 aaKnown RBP13□□□□□ -0.33
SCARB2-210ENST00000638567 CHCHD5Q9BSY4 110 aa13□□□□□ -0.33
SCARB2-210ENST00000638567 SCRT2Q9NQ03 307 aa13□□□□□ -0.33
SCARB2-210ENST00000638567 SONP18583 2426 aaKnown RBP13□□□□□ -0.33
SCARB2-210ENST00000638567 GAGE2BQ13066 116 aa12.99□□□□□ -0.33
SCARB2-210ENST00000638567 GAGE2EQ4V326 116 aa12.99□□□□□ -0.33
SCARB2-210ENST00000638567 TTTY13Q9BZ97 58 aa12.99□□□□□ -0.33
SCARB2-210ENST00000638567 GAGE2DQ9UEU5 116 aa12.99□□□□□ -0.33
SCARB2-210ENST00000638567 TSSC4Q9Y5U2 329 aaPredicted RBP12.99□□□□□ -0.33
SCARB2-210ENST00000638567 A0A087WX48 190 aa12.99□□□□□ -0.33
SCARB2-210ENST00000638567 ADARB2-AS1A8MUL3 147 aa12.99□□□□□ -0.33
SCARB2-210ENST00000638567 MORN3Q6PF18 240 aaPredicted RBP12.99□□□□□ -0.33
SCARB2-210ENST00000638567 TP53TG3Q9ULZ0 132 aa12.99□□□□□ -0.33
SCARB2-210ENST00000638567 EML5Q05BV3 1969 aa12.99□□□□□ -0.33
SCARB2-210ENST00000638567 NPBQ8NG41 125 aa12.99□□□□□ -0.33
SCARB2-210ENST00000638567 TANC2Q9HCD6 1990 aa12.99□□□□□ -0.33
SCARB2-210ENST00000638567 RPL36AP83881 106 aaKnown RBP12.99□□□□□ -0.33
SCARB2-210ENST00000638567 RPL36ALQ969Q0 106 aaKnown RBP12.99□□□□□ -0.33
SCARB2-210ENST00000638567 GNRH2O43555 120 aa12.98□□□□□ -0.33
SCARB2-210ENST00000638567 PRAC2D3DTV9 90 aa12.98□□□□□ -0.33
SCARB2-210ENST00000638567 KIAA1549Q9HCM3 1950 aa12.98□□□□□ -0.33
SCARB2-210ENST00000638567 TRBV25-1A0A075B6N4 114 aa12.98□□□□□ -0.33
SCARB2-210ENST00000638567 TRAV13-1A0A0B4J241 112 aa12.98□□□□□ -0.33
SCARB2-210ENST00000638567 C2orf82Q6UX34 121 aa12.98□□□□□ -0.33
SCARB2-210ENST00000638567 PRRC2CQ9Y520 2896 aaKnown RBP12.98□□□□□ -0.33
SCARB2-210ENST00000638567 ATXN8Q156A1 80 aa12.97□□□□□ -0.33
SCARB2-210ENST00000638567 A0A1B0GXF2 115 aa12.97□□□□□ -0.33
SCARB2-210ENST00000638567 BUB3O43684 328 aa12.97□□□□□ -0.33
SCARB2-210ENST00000638567 CENPVL3A0A0U1RRI6 287 aa12.97□□□□□ -0.33
SCARB2-210ENST00000638567 C20orf78Q9BR46 151 aa12.97□□□□□ -0.33
SCARB2-210ENST00000638567 LINC00574Q9H8X3 128 aa12.97□□□□□ -0.33
SCARB2-210ENST00000638567 PRSS29PA6NIE9 313 aa12.97□□□□□ -0.33
SCARB2-210ENST00000638567 ZNF625Q96I27 306 aaPredicted RBP12.97□□□□□ -0.33
SCARB2-210ENST00000638567 TMEM141Q96I45 108 aa12.97□□□□□ -0.33
SCARB2-210ENST00000638567 IGHV1OR15-1A0A075B7D0 117 aa12.96□□□□□ -0.33
SCARB2-210ENST00000638567 SPINK8P0C7L1 97 aa12.96□□□□□ -0.33
SCARB2-210ENST00000638567 CKS1BP61024 79 aa12.96□□□□□ -0.33
SCARB2-210ENST00000638567 C12orf74Q32Q52 190 aa12.96□□□□□ -0.33
SCARB2-210ENST00000638567 IGF2-ASQ6U949 168 aa12.96□□□□□ -0.33
SCARB2-210ENST00000638567 HTN3P15516 51 aa12.96□□□□□ -0.34
SCARB2-210ENST00000638567 KLHL30-AS1Q8NEE0 82 aa12.96□□□□□ -0.34
SCARB2-210ENST00000638567 F8W1H4 67 aa12.95□□□□□ -0.34
SCARB2-210ENST00000638567 TAX1BP3O14907 124 aa12.95□□□□□ -0.34
SCARB2-210ENST00000638567 LINC00158P58513 81 aa12.95□□□□□ -0.34
SCARB2-210ENST00000638567 ZFAND6Q6FIF0 208 aa12.95□□□□□ -0.34
SCARB2-210ENST00000638567 PTPRSQ13332 1948 aa12.95□□□□□ -0.34
SCARB2-210ENST00000638567 IGHV7-4-1A0A0J9YVY3 117 aa12.95□□□□□ -0.34
SCARB2-210ENST00000638567 WI2-2373I1.2A0A1W2PRP0 233 aa12.95□□□□□ -0.34
SCARB2-210ENST00000638567 Q8N7P7 452 aa12.95□□□□□ -0.34
SCARB2-210ENST00000638567 RBAKDNA6NC62 111 aa12.95□□□□□ -0.34
SCARB2-210ENST00000638567 CDKN1BP46527 198 aa12.95□□□□□ -0.34
SCARB2-210ENST00000638567 Q8N9W7 124 aa12.95□□□□□ -0.34
SCARB2-210ENST00000638567 SORL1Q92673 2214 aa12.94□□□□□ -0.34
SCARB2-210ENST00000638567 TAL2Q16559 108 aa12.94□□□□□ -0.34
SCARB2-210ENST00000638567 MBD6Q96DN6 1003 aa12.94□□□□□ -0.34
SCARB2-210ENST00000638567 TNRC6AQ8NDV7 1962 aaKnown RBP12.94□□□□□ -0.34
SCARB2-210ENST00000638567 IGHV3-16A0A0C4DH30 117 aa12.94□□□□□ -0.34
SCARB2-210ENST00000638567 INSP01308 110 aa12.94□□□□□ -0.34
SCARB2-210ENST00000638567 MLST8Q9BVC4 326 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms