RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 HOXA5P20719 270 aa15.29■□□□□ 0.04
SCN1B-206ENST00000638536 TDRG1Q3Y452 100 aa15.29■□□□□ 0.04
SCN1B-206ENST00000638536 MRPL16Q9NX20 251 aaKnown RBP15.29■□□□□ 0.04
SCN1B-206ENST00000638536 Q86TA4 180 aa15.28■□□□□ 0.04
SCN1B-206ENST00000638536 BOLA1Q9Y3E2 137 aa15.28■□□□□ 0.04
SCN1B-206ENST00000638536 TYMSP04818 313 aa15.28■□□□□ 0.04
SCN1B-206ENST00000638536 EIF5AL1Q6IS14 154 aaKnown RBP15.28■□□□□ 0.04
SCN1B-206ENST00000638536 FAM210BQ96KR6 192 aa15.28■□□□□ 0.04
SCN1B-206ENST00000638536 RAB5CP51148 216 aa15.27■□□□□ 0.03
SCN1B-206ENST00000638536 ZNF415Q09FC8 603 aa15.27■□□□□ 0.03
SCN1B-206ENST00000638536 SMUG1Q53HV7 270 aa15.27■□□□□ 0.03
SCN1B-206ENST00000638536 TRAV1-1A0A0B4J248 108 aa15.26■□□□□ 0.03
SCN1B-206ENST00000638536 IGHV3-16A0A0C4DH30 117 aa15.26■□□□□ 0.03
SCN1B-206ENST00000638536 OR5I1Q13606 314 aa15.26■□□□□ 0.03
SCN1B-206ENST00000638536 SAPCD1Q5SSQ6 148 aa15.26■□□□□ 0.03
SCN1B-206ENST00000638536 DNAH10Q8IVF4 4471 aa15.26■□□□□ 0.03
SCN1B-206ENST00000638536 SCO2A0A1W2PP80 73 aa15.25■□□□□ 0.03
SCN1B-206ENST00000638536 FBLL1A6NHQ2 334 aaKnown RBP15.25■□□□□ 0.03
SCN1B-206ENST00000638536 PFN1P07737 140 aaKnown RBP15.25■□□□□ 0.03
SCN1B-206ENST00000638536 CRIP1P50238 77 aa15.25■□□□□ 0.03
SCN1B-206ENST00000638536 GNG13Q9P2W3 67 aa15.25■□□□□ 0.03
SCN1B-206ENST00000638536 TRGV11A0A075B6L2 103 aa15.25■□□□□ 0.03
SCN1B-206ENST00000638536 TRGV2A0A075B6R0 118 aa15.25■□□□□ 0.03
SCN1B-206ENST00000638536 PPT1P50897 306 aa15.25■□□□□ 0.03
SCN1B-206ENST00000638536 ZC2HC1AQ96GY0 325 aa15.25■□□□□ 0.03
SCN1B-206ENST00000638536 ALKAL2Q6UX46 152 aa15.24■□□□□ 0.03
SCN1B-206ENST00000638536 C18orf15Q96N68 181 aa15.24■□□□□ 0.03
SCN1B-206ENST00000638536 IGHV3-53P01767 116 aa15.23■□□□□ 0.03
SCN1B-206ENST00000638536 LGALS9BQ3B8N2 356 aa15.23■□□□□ 0.03
SCN1B-206ENST00000638536 FMC1Q96HJ9 113 aa15.23■□□□□ 0.03
SCN1B-206ENST00000638536 SDF2L1Q9HCN8 221 aa15.23■□□□□ 0.03
SCN1B-206ENST00000638536 EPPK1P58107 5090 aaKnown RBP15.23■□□□□ 0.03
SCN1B-206ENST00000638536 DNAH2Q9P225 4427 aa15.22■□□□□ 0.03
SCN1B-206ENST00000638536 TRAV26-1A0A087WT03 109 aa15.22■□□□□ 0.03
SCN1B-206ENST00000638536 IGKV3D-20A0A0C4DH25 116 aa15.22■□□□□ 0.03
SCN1B-206ENST00000638536 A0A0J9YY99 117 aa15.22■□□□□ 0.03
SCN1B-206ENST00000638536 AKR1C3P42330 323 aa15.22■□□□□ 0.03
SCN1B-206ENST00000638536 UBE2G1P62253 170 aa15.22■□□□□ 0.03
SCN1B-206ENST00000638536 TCEAL7Q9BRU2 100 aa15.22■□□□□ 0.03
SCN1B-206ENST00000638536 LTAP01374 205 aa15.21■□□□□ 0.03
SCN1B-206ENST00000638536 NHLRC2Q8NBF2 726 aa15.21■□□□□ 0.03
SCN1B-206ENST00000638536 KCNS1Q96KK3 526 aa15.21■□□□□ 0.03
SCN1B-206ENST00000638536 TRBV6-1A0A0K0K1D8 114 aa15.21■□□□□ 0.02
SCN1B-206ENST00000638536 NUDT3O95989 172 aa15.21■□□□□ 0.02
SCN1B-206ENST00000638536 COX8CQ7Z4L0 72 aa15.21■□□□□ 0.02
SCN1B-206ENST00000638536 POM121L12Q8N7R1 296 aa15.21■□□□□ 0.02
SCN1B-206ENST00000638536 ZFP30Q9Y2G7 519 aa15.21■□□□□ 0.02
SCN1B-206ENST00000638536 C15orf53Q8NAA6 179 aa15.2■□□□□ 0.02
SCN1B-206ENST00000638536 RASL10AQ92737 203 aa15.2■□□□□ 0.02
SCN1B-206ENST00000638536 SPXQ9BT56 116 aa15.2■□□□□ 0.02
SCN1B-206ENST00000638536 MANBALQ9NQG1 85 aa15.2■□□□□ 0.02
SCN1B-206ENST00000638536 FABP5P3A8MUU1 101 aa15.19■□□□□ 0.02
SCN1B-206ENST00000638536 SFTA3P0C7M3 94 aa15.19■□□□□ 0.02
SCN1B-206ENST00000638536 P0DMU3 169 aa15.19■□□□□ 0.02
SCN1B-206ENST00000638536 FAM231AP0DMU4 169 aa15.19■□□□□ 0.02
SCN1B-206ENST00000638536 FAM231CP0DMU5 169 aa15.19■□□□□ 0.02
SCN1B-206ENST00000638536 ZNF575Q86XF7 245 aa15.19■□□□□ 0.02
SCN1B-206ENST00000638536 VSIG2Q96IQ7 327 aa15.19■□□□□ 0.02
SCN1B-206ENST00000638536 DERL1Q9BUN8 251 aa15.19■□□□□ 0.02
SCN1B-206ENST00000638536 RNASE3P12724 160 aaKnown RBP15.18■□□□□ 0.02
SCN1B-206ENST00000638536 ZNF479Q96JC4 524 aa15.18■□□□□ 0.02
SCN1B-206ENST00000638536 SH2D1AO60880 128 aa15.17■□□□□ 0.02
SCN1B-206ENST00000638536 M0R2P5 195 aa15.17■□□□□ 0.02
SCN1B-206ENST00000638536 FHL2Q14192 279 aa15.17■□□□□ 0.02
SCN1B-206ENST00000638536 TEX46H3BTG2 121 aa15.16■□□□□ 0.02
SCN1B-206ENST00000638536 ZNF674Q2M3X9 581 aa15.16■□□□□ 0.02
SCN1B-206ENST00000638536 C9orf85Q96MD7 179 aa15.16■□□□□ 0.02
SCN1B-206ENST00000638536 M0R036 132 aa15.15■□□□□ 0.02
SCN1B-206ENST00000638536 ORM1P02763 201 aa15.15■□□□□ 0.02
SCN1B-206ENST00000638536 C11orf52Q96A22 123 aa15.15■□□□□ 0.02
SCN1B-206ENST00000638536 MLST8Q9BVC4 326 aa15.15■□□□□ 0.02
SCN1B-206ENST00000638536 C9JCJ5 164 aa15.14■□□□□ 0.01
SCN1B-206ENST00000638536 RPL35P42766 123 aaKnown RBP15.14■□□□□ 0.01
SCN1B-206ENST00000638536 FAM162BQ5T6X4 162 aa15.14■□□□□ 0.01
SCN1B-206ENST00000638536 PGPEP1LA6NFU8 196 aa15.14■□□□□ 0.01
SCN1B-206ENST00000638536 KRBOX1C9JBD0 128 aa15.14■□□□□ 0.01
SCN1B-206ENST00000638536 BAGE2Q86Y30 109 aa15.14■□□□□ 0.01
SCN1B-206ENST00000638536 UBE2DNLQ8IWF7 75 aa15.14■□□□□ 0.01
SCN1B-206ENST00000638536 B4DEV8 164 aa15.13■□□□□ 0.01
SCN1B-206ENST00000638536 S100A9P06702 114 aaKnown RBP15.13■□□□□ 0.01
SCN1B-206ENST00000638536 BCL2P10415 239 aa15.13■□□□□ 0.01
SCN1B-206ENST00000638536 MEF2BQ02080 365 aaPredicted RBP15.13■□□□□ 0.01
SCN1B-206ENST00000638536 GRIFINA4D1Z8 144 aa15.12■□□□□ 0.01
SCN1B-206ENST00000638536 ZNF876PQ49A33 203 aa15.12■□□□□ 0.01
SCN1B-206ENST00000638536 TMSB15BA0A087X1C1 80 aa15.11■□□□□ 0.01
SCN1B-206ENST00000638536 A0A096LPF7 62 aa15.11■□□□□ 0.01
SCN1B-206ENST00000638536 RAB19A4D1S5 217 aa15.11■□□□□ 0.01
SCN1B-206ENST00000638536 CRYBA4P53673 196 aa15.11■□□□□ 0.01
SCN1B-206ENST00000638536 RNF212Q495C1 297 aa15.11■□□□□ 0.01
SCN1B-206ENST00000638536 HHLA3Q9XRX5 114 aa15.11■□□□□ 0.01
SCN1B-206ENST00000638536 LINC00588Q9Y4M8 146 aa15.11■□□□□ 0.01
SCN1B-206ENST00000638536 TRAV4A0A0B4J268 109 aa15.1■□□□□ 0.01
SCN1B-206ENST00000638536 H3BNG1 76 aa15.1■□□□□ 0.01
SCN1B-206ENST00000638536 ZNF506Q5JVG8 444 aa15.1■□□□□ 0.01
SCN1B-206ENST00000638536 LYPD6BQ8NI32 183 aa15.1■□□□□ 0.01
SCN1B-206ENST00000638536 TXNDC17Q9BRA2 123 aa15.1■□□□□ 0.01
SCN1B-206ENST00000638536 FAT2Q9NYQ8 4349 aa15.1■□□□□ 0.01
SCN1B-206ENST00000638536 IGLV2-18A0A075B6J9 118 aa15.1■□□□□ 0.01
SCN1B-206ENST00000638536 PAX4O43316 350 aa15.1■□□□□ 0.01
SCN1B-206ENST00000638536 IFNA1P01562 189 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms