RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 ZNF726P1Q15940 193 aa11.57□□□□□ -0.56
CACNA1A-259ENST00000638114 TTC32Q5I0X7 151 aa11.57□□□□□ -0.56
CACNA1A-259ENST00000638114 AKR1C8PQ5T2L2 129 aa11.57□□□□□ -0.56
CACNA1A-259ENST00000638114 RASL10AQ92737 203 aa11.57□□□□□ -0.56
CACNA1A-259ENST00000638114 EPDR1Q9UM22 224 aa11.57□□□□□ -0.56
CACNA1A-259ENST00000638114 PSG8Q9UQ74 426 aa11.57□□□□□ -0.56
CACNA1A-259ENST00000638114 HERC2O95714 4834 aa11.56□□□□□ -0.56
CACNA1A-259ENST00000638114 SMLR1H3BR10 107 aa11.56□□□□□ -0.56
CACNA1A-259ENST00000638114 TAAR5O14804 337 aa11.56□□□□□ -0.56
CACNA1A-259ENST00000638114 TYMSP04818 313 aa11.56□□□□□ -0.56
CACNA1A-259ENST00000638114 FLI1Q01543 452 aaPredicted RBP11.56□□□□□ -0.56
CACNA1A-259ENST00000638114 PRNTQ86SH4 94 aa11.56□□□□□ -0.56
CACNA1A-259ENST00000638114 CYB561D1Q8N8Q1 229 aa11.56□□□□□ -0.56
CACNA1A-259ENST00000638114 ZNF479Q96JC4 524 aa11.56□□□□□ -0.56
CACNA1A-259ENST00000638114 KCNS1Q96KK3 526 aa11.56□□□□□ -0.56
CACNA1A-259ENST00000638114 A0A1W2PRE2 83 aa11.55□□□□□ -0.56
CACNA1A-259ENST00000638114 M0R2P5 195 aa11.55□□□□□ -0.56
CACNA1A-259ENST00000638114 GCGP01275 180 aa11.55□□□□□ -0.56
CACNA1A-259ENST00000638114 FGF8P55075 233 aaPredicted RBP11.55□□□□□ -0.56
CACNA1A-259ENST00000638114 UBE2G2P60604 165 aa11.55□□□□□ -0.56
CACNA1A-259ENST00000638114 TNP2Q05952 138 aa11.55□□□□□ -0.56
CACNA1A-259ENST00000638114 ZFP69Q49AA0 526 aa11.55□□□□□ -0.56
CACNA1A-259ENST00000638114 TMEM75Q8N9X5 138 aa11.55□□□□□ -0.56
CACNA1A-259ENST00000638114 KRTAP1-5Q9BYS1 174 aa11.55□□□□□ -0.56
CACNA1A-259ENST00000638114 IFNA7P01567 189 aa11.54□□□□□ -0.56
CACNA1A-259ENST00000638114 IGLV2-11P01706 119 aa11.54□□□□□ -0.56
CACNA1A-259ENST00000638114 ZNF80P51504 273 aaPredicted RBP11.54□□□□□ -0.56
CACNA1A-259ENST00000638114 MRPL23Q16540 153 aaKnown RBP11.54□□□□□ -0.56
CACNA1A-259ENST00000638114 CYTL1Q9NRR1 136 aa11.54□□□□□ -0.56
CACNA1A-259ENST00000638114 KIAA1109Q2LD37 5005 aa11.53□□□□□ -0.56
CACNA1A-259ENST00000638114 TRAV4A0A0B4J268 109 aa11.53□□□□□ -0.56
CACNA1A-259ENST00000638114 FBLL1A6NHQ2 334 aaKnown RBP11.53□□□□□ -0.56
CACNA1A-259ENST00000638114 SMUG1Q53HV7 270 aa11.53□□□□□ -0.56
CACNA1A-259ENST00000638114 OR4C5Q8NGB2 326 aa11.53□□□□□ -0.56
CACNA1A-259ENST00000638114 C11orf21Q9P2W6 132 aa11.53□□□□□ -0.56
CACNA1A-259ENST00000638114 DNAH11Q96DT5 4516 aa11.52□□□□□ -0.56
CACNA1A-259ENST00000638114 TRAV34A0A0B4J273 112 aa11.52□□□□□ -0.57
CACNA1A-259ENST00000638114 A0A1W2PPQ1 181 aa11.52□□□□□ -0.57
CACNA1A-259ENST00000638114 PFN1P07737 140 aaKnown RBP11.52□□□□□ -0.57
CACNA1A-259ENST00000638114 SAPCD1Q5SSQ6 148 aa11.52□□□□□ -0.57
CACNA1A-259ENST00000638114 NEGR1Q7Z3B1 354 aa11.52□□□□□ -0.57
CACNA1A-259ENST00000638114 PCNPQ8WW12 178 aaKnown RBP11.52□□□□□ -0.57
CACNA1A-259ENST00000638114 LINC00479Q96M42 142 aa11.52□□□□□ -0.57
CACNA1A-259ENST00000638114 MAP1LC3B2A6NCE7 125 aa11.51□□□□□ -0.57
CACNA1A-259ENST00000638114 C9JCJ5 164 aa11.51□□□□□ -0.57
CACNA1A-259ENST00000638114 NXPH4O95158 308 aa11.51□□□□□ -0.57
CACNA1A-259ENST00000638114 GYPEP15421 78 aa11.51□□□□□ -0.57
CACNA1A-259ENST00000638114 SRIP30626 198 aa11.51□□□□□ -0.57
CACNA1A-259ENST00000638114 PPT1P50897 306 aa11.51□□□□□ -0.57
CACNA1A-259ENST00000638114 MAP1LC3BQ9GZQ8 125 aa11.51□□□□□ -0.57
CACNA1A-259ENST00000638114 DYNC1H1Q14204 4646 aaKnown RBP11.51□□□□□ -0.57
CACNA1A-259ENST00000638114 FAM74A7A6NL05 159 aa11.5□□□□□ -0.57
CACNA1A-259ENST00000638114 K7EQD1 137 aa11.5□□□□□ -0.57
CACNA1A-259ENST00000638114 PEX7O00628 323 aa11.5□□□□□ -0.57
CACNA1A-259ENST00000638114 SIVA1O15304 175 aa11.5□□□□□ -0.57
CACNA1A-259ENST00000638114 ORM1P02763 201 aa11.5□□□□□ -0.57
CACNA1A-259ENST00000638114 LYPD5Q6UWN5 251 aa11.5□□□□□ -0.57
CACNA1A-259ENST00000638114 ZNF575Q86XF7 245 aa11.5□□□□□ -0.57
CACNA1A-259ENST00000638114 KCNRGQ8N5I3 272 aa11.5□□□□□ -0.57
CACNA1A-259ENST00000638114 MED14OSP0DP75 135 aa11.49□□□□□ -0.57
CACNA1A-259ENST00000638114 ZNF345Q14585 488 aa11.49□□□□□ -0.57
CACNA1A-259ENST00000638114 ZNF876PQ49A33 203 aa11.49□□□□□ -0.57
CACNA1A-259ENST00000638114 NKX6-2Q9C056 277 aaPredicted RBP11.49□□□□□ -0.57
CACNA1A-259ENST00000638114 ARL2-SNX15V9GYD0 113 aa11.49□□□□□ -0.57
CACNA1A-259ENST00000638114 Q86TA4 180 aa11.48□□□□□ -0.57
CACNA1A-259ENST00000638114 OR11H4Q8NGC9 324 aa11.48□□□□□ -0.57
CACNA1A-259ENST00000638114 STOML3Q8TAV4 291 aa11.48□□□□□ -0.57
CACNA1A-259ENST00000638114 HIST1H2BAQ96A08 127 aa11.48□□□□□ -0.57
CACNA1A-259ENST00000638114 FHITP49789 147 aa11.47□□□□□ -0.57
CACNA1A-259ENST00000638114 C9orf85Q96MD7 179 aa11.47□□□□□ -0.57
CACNA1A-259ENST00000638114 TXNDC17Q9BRA2 123 aa11.47□□□□□ -0.57
CACNA1A-259ENST00000638114 LOC100131303A0A0U1RQF7 123 aa11.46□□□□□ -0.57
CACNA1A-259ENST00000638114 KANTRA0A1W2PQU2 76 aa11.46□□□□□ -0.57
CACNA1A-259ENST00000638114 HMSDA8MTL9 139 aa11.46□□□□□ -0.57
CACNA1A-259ENST00000638114 GATA1P15976 413 aaPredicted RBP11.46□□□□□ -0.57
CACNA1A-259ENST00000638114 BTF3P20290 206 aaKnown RBP11.46□□□□□ -0.57
CACNA1A-259ENST00000638114 LINC00315P59091 139 aa11.46□□□□□ -0.57
CACNA1A-259ENST00000638114 CST9LP1Q5W188 147 aa11.46□□□□□ -0.57
CACNA1A-259ENST00000638114 ZNF471Q9BX82 626 aaPredicted RBP11.46□□□□□ -0.57
CACNA1A-259ENST00000638114 A0A0D9SG52 128 aa11.45□□□□□ -0.58
CACNA1A-259ENST00000638114 PGPEP1LA6NFU8 196 aa11.45□□□□□ -0.58
CACNA1A-259ENST00000638114 FABP5P3A8MUU1 101 aa11.45□□□□□ -0.58
CACNA1A-259ENST00000638114 RS1O15537 224 aa11.45□□□□□ -0.58
CACNA1A-259ENST00000638114 BCL2L11O43521 198 aa11.45□□□□□ -0.58
CACNA1A-259ENST00000638114 SEC11BP0C7V7 166 aa11.45□□□□□ -0.58
CACNA1A-259ENST00000638114 RNASE3P12724 160 aaKnown RBP11.45□□□□□ -0.58
CACNA1A-259ENST00000638114 S100A4P26447 101 aaKnown RBP11.45□□□□□ -0.58
CACNA1A-259ENST00000638114 UBE2G1P62253 170 aa11.45□□□□□ -0.58
CACNA1A-259ENST00000638114 ZNF506Q5JVG8 444 aa11.45□□□□□ -0.58
CACNA1A-259ENST00000638114 CFAP126Q5VTH2 177 aa11.45□□□□□ -0.58
CACNA1A-259ENST00000638114 DPPA3Q6W0C5 159 aa11.45□□□□□ -0.58
CACNA1A-259ENST00000638114 NHLRC2Q8NBF2 726 aa11.45□□□□□ -0.58
CACNA1A-259ENST00000638114 FAM213BQ8TBF2 198 aa11.45□□□□□ -0.58
CACNA1A-259ENST00000638114 IGHV3-73A0A0B4J1V6 119 aa11.44□□□□□ -0.58
CACNA1A-259ENST00000638114 IGKV3D-20A0A0C4DH25 116 aa11.44□□□□□ -0.58
CACNA1A-259ENST00000638114 C16orf90A8MZG2 172 aa11.44□□□□□ -0.58
CACNA1A-259ENST00000638114 FMC1Q96HJ9 113 aa11.44□□□□□ -0.58
CACNA1A-259ENST00000638114 A0A1B0GV50 99 aa11.43□□□□□ -0.58
CACNA1A-259ENST00000638114 UMAD1C9J7I0 102 aa11.43□□□□□ -0.58
CACNA1A-259ENST00000638114 CIDEAO60543 219 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms