RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 FLI1Q01543 452 aaPredicted RBP9.57□□□□□ -0.88
PNKP-228ENST00000637325 C8orf49Q96NF6 230 aa9.57□□□□□ -0.88
PNKP-228ENST00000637325 HHLA3Q9XRX5 114 aa9.57□□□□□ -0.88
PNKP-228ENST00000637325 ICOSQ9Y6W8 199 aa9.57□□□□□ -0.88
PNKP-228ENST00000637325 IGHV3-16A0A0C4DH30 117 aa9.56□□□□□ -0.88
PNKP-228ENST00000637325 FBLL1A6NHQ2 334 aaKnown RBP9.56□□□□□ -0.88
PNKP-228ENST00000637325 M0R2P5 195 aa9.56□□□□□ -0.88
PNKP-228ENST00000637325 TYMSP04818 313 aa9.56□□□□□ -0.88
PNKP-228ENST00000637325 PPT1P50897 306 aa9.56□□□□□ -0.88
PNKP-228ENST00000637325 FHL2Q14192 279 aa9.56□□□□□ -0.88
PNKP-228ENST00000637325 ZNF726P1Q15940 193 aa9.56□□□□□ -0.88
PNKP-228ENST00000637325 SMUG1Q53HV7 270 aa9.56□□□□□ -0.88
PNKP-228ENST00000637325 TMEM75Q8N9X5 138 aa9.56□□□□□ -0.88
PNKP-228ENST00000637325 RASL10AQ92737 203 aa9.56□□□□□ -0.88
PNKP-228ENST00000637325 CYTL1Q9NRR1 136 aa9.56□□□□□ -0.88
PNKP-228ENST00000637325 MRPS16Q9Y3D3 137 aaKnown RBP9.56□□□□□ -0.88
PNKP-228ENST00000637325 A0A1B0GVY2 172 aa9.55□□□□□ -0.88
PNKP-228ENST00000637325 GCGP01275 180 aa9.55□□□□□ -0.88
PNKP-228ENST00000637325 SFTA3P0C7M3 94 aa9.55□□□□□ -0.88
PNKP-228ENST00000637325 CRYBA4P53673 196 aa9.55□□□□□ -0.88
PNKP-228ENST00000637325 TTC32Q5I0X7 151 aa9.55□□□□□ -0.88
PNKP-228ENST00000637325 SAPCD1Q5SSQ6 148 aa9.55□□□□□ -0.88
PNKP-228ENST00000637325 C6orf223Q8N319 242 aa9.55□□□□□ -0.88
PNKP-228ENST00000637325 OR4C5Q8NGB2 326 aa9.55□□□□□ -0.88
PNKP-228ENST00000637325 STOML3Q8TAV4 291 aa9.55□□□□□ -0.88
PNKP-228ENST00000637325 ZNF479Q96JC4 524 aa9.55□□□□□ -0.88
PNKP-228ENST00000637325 UPK3BQ9BT76 320 aa9.55□□□□□ -0.88
PNKP-228ENST00000637325 NKX6-2Q9C056 277 aaPredicted RBP9.55□□□□□ -0.88
PNKP-228ENST00000637325 PKHD1P08F94 4074 aa9.55□□□□□ -0.88
PNKP-228ENST00000637325 TRAV4A0A0B4J268 109 aa9.54□□□□□ -0.88
PNKP-228ENST00000637325 MAP1LC3B2A6NCE7 125 aa9.54□□□□□ -0.88
PNKP-228ENST00000637325 IGLV2-11P01706 119 aa9.54□□□□□ -0.88
PNKP-228ENST00000637325 ZNF80P51504 273 aaPredicted RBP9.54□□□□□ -0.88
PNKP-228ENST00000637325 ZNF345Q14585 488 aa9.54□□□□□ -0.88
PNKP-228ENST00000637325 MRPL23Q16540 153 aaKnown RBP9.54□□□□□ -0.88
PNKP-228ENST00000637325 KCNRGQ8N5I3 272 aa9.54□□□□□ -0.88
PNKP-228ENST00000637325 PCNPQ8WW12 178 aaKnown RBP9.54□□□□□ -0.88
PNKP-228ENST00000637325 MAP1LC3BQ9GZQ8 125 aa9.54□□□□□ -0.88
PNKP-228ENST00000637325 TRAV34A0A0B4J273 112 aa9.53□□□□□ -0.88
PNKP-228ENST00000637325 A0A0D9SG52 128 aa9.53□□□□□ -0.88
PNKP-228ENST00000637325 KANTRA0A1W2PQU2 76 aa9.53□□□□□ -0.88
PNKP-228ENST00000637325 FAM74A7A6NL05 159 aa9.53□□□□□ -0.88
PNKP-228ENST00000637325 PEX7O00628 323 aa9.53□□□□□ -0.88
PNKP-228ENST00000637325 PFN1P07737 140 aaKnown RBP9.53□□□□□ -0.88
PNKP-228ENST00000637325 LINC00479Q96M42 142 aa9.53□□□□□ -0.88
PNKP-228ENST00000637325 PKD1P98161 4303 aa9.53□□□□□ -0.88
PNKP-228ENST00000637325 HMSDA8MTL9 139 aa9.52□□□□□ -0.89
PNKP-228ENST00000637325 C9JCJ5 164 aa9.52□□□□□ -0.89
PNKP-228ENST00000637325 SRIP30626 198 aa9.52□□□□□ -0.89
PNKP-228ENST00000637325 HIST1H2BAQ96A08 127 aa9.52□□□□□ -0.89
PNKP-228ENST00000637325 ZNF471Q9BX82 626 aaPredicted RBP9.52□□□□□ -0.89
PNKP-228ENST00000637325 ORM1P02763 201 aa9.51□□□□□ -0.89
PNKP-228ENST00000637325 GYPEP15421 78 aa9.51□□□□□ -0.89
PNKP-228ENST00000637325 CST9LP1Q5W188 147 aa9.51□□□□□ -0.89
PNKP-228ENST00000637325 NEGR1Q7Z3B1 354 aa9.51□□□□□ -0.89
PNKP-228ENST00000637325 OR11H4Q8NGC9 324 aa9.51□□□□□ -0.89
PNKP-228ENST00000637325 C11orf21Q9P2W6 132 aa9.51□□□□□ -0.89
PNKP-228ENST00000637325 ARL2-SNX15V9GYD0 113 aa9.51□□□□□ -0.89
PNKP-228ENST00000637325 DYNC1H1Q14204 4646 aaKnown RBP9.51□□□□□ -0.89
PNKP-228ENST00000637325 A0A1W2PPQ1 181 aa9.5□□□□□ -0.89
PNKP-228ENST00000637325 FABP5P3A8MUU1 101 aa9.5□□□□□ -0.89
PNKP-228ENST00000637325 K7EQD1 137 aa9.5□□□□□ -0.89
PNKP-228ENST00000637325 SIVA1O15304 175 aa9.5□□□□□ -0.89
PNKP-228ENST00000637325 BCL2L11O43521 198 aa9.5□□□□□ -0.89
PNKP-228ENST00000637325 PFDN1O60925 122 aa9.5□□□□□ -0.89
PNKP-228ENST00000637325 NXPH4O95158 308 aa9.5□□□□□ -0.89
PNKP-228ENST00000637325 SEC11BP0C7V7 166 aa9.5□□□□□ -0.89
PNKP-228ENST00000637325 S100A4P26447 101 aaKnown RBP9.5□□□□□ -0.89
PNKP-228ENST00000637325 EIF5AP63241 154 aaKnown RBP9.5□□□□□ -0.89
PNKP-228ENST00000637325 ZNF876PQ49A33 203 aa9.5□□□□□ -0.89
PNKP-228ENST00000637325 LYPD5Q6UWN5 251 aa9.5□□□□□ -0.89
PNKP-228ENST00000637325 FAM213BQ8TBF2 198 aa9.5□□□□□ -0.89
PNKP-228ENST00000637325 TXNDC17Q9BRA2 123 aa9.5□□□□□ -0.89
PNKP-228ENST00000637325 DNAH11Q96DT5 4516 aa9.49□□□□□ -0.89
PNKP-228ENST00000637325 UMAD1C9J7I0 102 aa9.49□□□□□ -0.89
PNKP-228ENST00000637325 FHITP49789 147 aa9.49□□□□□ -0.89
PNKP-228ENST00000637325 UBE2G1P62253 170 aa9.49□□□□□ -0.89
PNKP-228ENST00000637325 TNP2Q05952 138 aa9.49□□□□□ -0.89
PNKP-228ENST00000637325 Q86TA4 180 aa9.49□□□□□ -0.89
PNKP-228ENST00000637325 SFT2D1Q8WV19 159 aa9.49□□□□□ -0.89
PNKP-228ENST00000637325 A0A1B0GV50 99 aa9.48□□□□□ -0.89
PNKP-228ENST00000637325 TMUB2Q71RG4 321 aa9.48□□□□□ -0.89
PNKP-228ENST00000637325 FMC1Q96HJ9 113 aa9.48□□□□□ -0.89
PNKP-228ENST00000637325 C9orf85Q96MD7 179 aa9.48□□□□□ -0.89
PNKP-228ENST00000637325 TCEAL7Q9BRU2 100 aa9.48□□□□□ -0.89
PNKP-228ENST00000637325 KRTAP1-5Q9BYS1 174 aa9.48□□□□□ -0.89
PNKP-228ENST00000637325 ZFP30Q9Y2G7 519 aa9.48□□□□□ -0.89
PNKP-228ENST00000637325 RS1O15537 224 aa9.47□□□□□ -0.89
PNKP-228ENST00000637325 CIDEAO60543 219 aa9.47□□□□□ -0.89
PNKP-228ENST00000637325 PAGE4O60829 102 aa9.47□□□□□ -0.89
PNKP-228ENST00000637325 ASIPP42127 132 aa9.47□□□□□ -0.89
PNKP-228ENST00000637325 AKR1C3P42330 323 aa9.47□□□□□ -0.89
PNKP-228ENST00000637325 DPPA3Q6W0C5 159 aa9.47□□□□□ -0.89
PNKP-228ENST00000637325 SH2D6Q7Z4S9 175 aa9.47□□□□□ -0.89
PNKP-228ENST00000637325 NHLRC2Q8NBF2 726 aa9.47□□□□□ -0.89
PNKP-228ENST00000637325 MBD3L1Q8WWY6 194 aa9.47□□□□□ -0.89
PNKP-228ENST00000637325 IGHV3-73A0A0B4J1V6 119 aa9.46□□□□□ -0.9
PNKP-228ENST00000637325 IGKV3D-20A0A0C4DH25 116 aa9.46□□□□□ -0.9
PNKP-228ENST00000637325 PGPEP1LA6NFU8 196 aa9.46□□□□□ -0.9
PNKP-228ENST00000637325 B4DEV8 164 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms