RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	MRPL51	Q4U2R6	128 aa	Known RBP	13.03	□□□□□ -0.32
CACNA1A-238	ENST00000637276	GATA3	P23771	443 aa		13.03	□□□□□ -0.32
CACNA1A-238	ENST00000637276	UBE2D4	Q9Y2X8	147 aa		13.03	□□□□□ -0.32
CACNA1A-238	ENST00000637276	SCX	Q7RTU7	201 aa		13.03	□□□□□ -0.32
CACNA1A-238	ENST00000637276		Q86TA4	180 aa		13.02	□□□□□ -0.32
CACNA1A-238	ENST00000637276		A0A0U1RQV1	116 aa		13.02	□□□□□ -0.32
CACNA1A-238	ENST00000637276	IGHV4-61	A0A0C4DH41	118 aa		13.02	□□□□□ -0.33
CACNA1A-238	ENST00000637276	FUS	P35637	526 aa	Known RBP eCLIP	13.02	□□□□□ -0.33
CACNA1A-238	ENST00000637276	SIRPD	Q9H106	197 aa		13.02	□□□□□ -0.33
CACNA1A-238	ENST00000637276	PLA2G1B	P04054	148 aa	Known RBP	13.02	□□□□□ -0.33
CACNA1A-238	ENST00000637276	WFDC10B	Q8IUB3	73 aa		13.02	□□□□□ -0.33
CACNA1A-238	ENST00000637276	C1orf194	Q5T5A4	169 aa		13.02	□□□□□ -0.33
CACNA1A-238	ENST00000637276	LYPD3	O95274	346 aa		13.01	□□□□□ -0.33
CACNA1A-238	ENST00000637276	GATA1	P15976	413 aa	Predicted RBP	13.01	□□□□□ -0.33
CACNA1A-238	ENST00000637276		A0A1B0GW64	132 aa		13.01	□□□□□ -0.33
CACNA1A-238	ENST00000637276	ZFP36L1	Q07352	338 aa	Known RBP	13.01	□□□□□ -0.33
CACNA1A-238	ENST00000637276	HELZ	P42694	1942 aa	Known RBP	13.01	□□□□□ -0.33
CACNA1A-238	ENST00000637276	MED13	Q9UHV7	2174 aa		13.01	□□□□□ -0.33
CACNA1A-238	ENST00000637276	UBE2V1	Q13404	147 aa		13.01	□□□□□ -0.33
CACNA1A-238	ENST00000637276	DYNAP	Q8N1N2	210 aa		13.01	□□□□□ -0.33
CACNA1A-238	ENST00000637276	TMEM141	Q96I45	108 aa		13.01	□□□□□ -0.33
CACNA1A-238	ENST00000637276	ICOS	Q9Y6W8	199 aa		13	□□□□□ -0.33
CACNA1A-238	ENST00000637276	C15orf62	A8K5M9	175 aa		13	□□□□□ -0.33
CACNA1A-238	ENST00000637276	CRYGS	P22914	178 aa		13	□□□□□ -0.33
CACNA1A-238	ENST00000637276	OR11H6	Q8NGC7	330 aa		13	□□□□□ -0.33
CACNA1A-238	ENST00000637276	GRN	P28799	593 aa	Known RBP	13	□□□□□ -0.33
CACNA1A-238	ENST00000637276	RALGAPA2	Q2PPJ7	1873 aa		13	□□□□□ -0.33
CACNA1A-238	ENST00000637276	FLVCR1-AS1	Q8TAF5	88 aa		12.99	□□□□□ -0.33
CACNA1A-238	ENST00000637276	ZC2HC1A	Q96GY0	325 aa		12.99	□□□□□ -0.33
CACNA1A-238	ENST00000637276		Q6P435	159 aa		12.99	□□□□□ -0.33
CACNA1A-238	ENST00000637276	NREP	Q16612	68 aa		12.99	□□□□□ -0.33
CACNA1A-238	ENST00000637276	SCN10A	Q9Y5Y9	1956 aa		12.99	□□□□□ -0.33
CACNA1A-238	ENST00000637276	IFI6	P09912	130 aa		12.99	□□□□□ -0.33
CACNA1A-238	ENST00000637276	HIGD2A	Q9BW72	106 aa		12.99	□□□□□ -0.33
CACNA1A-238	ENST00000637276	NTN3	O00634	580 aa	Predicted RBP	12.98	□□□□□ -0.33
CACNA1A-238	ENST00000637276		J3QRE1	110 aa		12.98	□□□□□ -0.33
CACNA1A-238	ENST00000637276	DKK2	Q9UBU2	259 aa		12.98	□□□□□ -0.33
CACNA1A-238	ENST00000637276	COL4A6	Q14031	1691 aa		12.98	□□□□□ -0.33
CACNA1A-238	ENST00000637276	COL5A3	P25940	1745 aa	Predicted RBP	12.98	□□□□□ -0.33
CACNA1A-238	ENST00000637276	ZNF134	P52741	427 aa		12.98	□□□□□ -0.33
CACNA1A-238	ENST00000637276	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	12.98	□□□□□ -0.33
CACNA1A-238	ENST00000637276	NPS	P0C0P6	89 aa		12.98	□□□□□ -0.33
CACNA1A-238	ENST00000637276	PYY3	Q5JQD4	70 aa		12.98	□□□□□ -0.33
CACNA1A-238	ENST00000637276	MUSTN1	Q8IVN3	82 aa		12.98	□□□□□ -0.33
CACNA1A-238	ENST00000637276	CEND1	Q8N111	149 aa		12.98	□□□□□ -0.33
CACNA1A-238	ENST00000637276	KLK12	Q9UKR0	248 aa		12.98	□□□□□ -0.33
CACNA1A-238	ENST00000637276	MPZ	P25189	248 aa		12.98	□□□□□ -0.33
CACNA1A-238	ENST00000637276	KLK5	Q9Y337	293 aa	Predicted RBP	12.98	□□□□□ -0.33
CACNA1A-238	ENST00000637276	FGF16	O43320	207 aa		12.97	□□□□□ -0.33
CACNA1A-238	ENST00000637276	ETDB	Q3ZM63	59 aa		12.97	□□□□□ -0.33
CACNA1A-238	ENST00000637276	RPL39L	Q96EH5	51 aa	Known RBP	12.97	□□□□□ -0.33
CACNA1A-238	ENST00000637276	LRRC37A	A6NMS7	1700 aa		12.97	□□□□□ -0.33
CACNA1A-238	ENST00000637276	IGKV2D-26	A0A0A0MRZ7	120 aa		12.97	□□□□□ -0.33
CACNA1A-238	ENST00000637276	MRPL35	Q9NZE8	188 aa	Known RBP	12.97	□□□□□ -0.33
CACNA1A-238	ENST00000637276	IGLV3-12	A0A075B6K2	115 aa		12.97	□□□□□ -0.33
CACNA1A-238	ENST00000637276		A0A087WZ39	114 aa		12.97	□□□□□ -0.33
CACNA1A-238	ENST00000637276	PRR20E	P86478	221 aa		12.97	□□□□□ -0.33
CACNA1A-238	ENST00000637276	PRR20C	P86479	221 aa		12.97	□□□□□ -0.33
CACNA1A-238	ENST00000637276	PRR20D	P86480	221 aa		12.97	□□□□□ -0.33
CACNA1A-238	ENST00000637276	PRR20B	P86481	221 aa		12.97	□□□□□ -0.33
CACNA1A-238	ENST00000637276	PRR20A	P86496	221 aa		12.97	□□□□□ -0.33
CACNA1A-238	ENST00000637276	CSRP1	P21291	193 aa	Known RBP	12.97	□□□□□ -0.33
CACNA1A-238	ENST00000637276	MP68	P56378	58 aa		12.97	□□□□□ -0.33
CACNA1A-238	ENST00000637276	NTN5	Q8WTR8	489 aa	Predicted RBP	12.97	□□□□□ -0.33
CACNA1A-238	ENST00000637276	RBAKDN	A6NC62	111 aa		12.96	□□□□□ -0.33
CACNA1A-238	ENST00000637276	PFN1	P07737	140 aa	Known RBP	12.96	□□□□□ -0.33
CACNA1A-238	ENST00000637276	PCP2	Q8IVA1	136 aa		12.96	□□□□□ -0.33
CACNA1A-238	ENST00000637276	IGHV2-70D	A0A0C4DH43	119 aa		12.96	□□□□□ -0.33
CACNA1A-238	ENST00000637276	IGKV1-17	P01599	117 aa		12.96	□□□□□ -0.33
CACNA1A-238	ENST00000637276	PPDPF	Q9H3Y8	114 aa		12.96	□□□□□ -0.33
CACNA1A-238	ENST00000637276	PNRC2	Q9NPJ4	139 aa	Known RBP	12.96	□□□□□ -0.33
CACNA1A-238	ENST00000637276	HERV-K104	P63124	156 aa		12.96	□□□□□ -0.33
CACNA1A-238	ENST00000637276	SLA	Q13239	276 aa		12.96	□□□□□ -0.33
CACNA1A-238	ENST00000637276	IGHV4-38-2	P0DP08	117 aa		12.96	□□□□□ -0.34
CACNA1A-238	ENST00000637276	UBE2D1	P51668	147 aa		12.96	□□□□□ -0.34
CACNA1A-238	ENST00000637276	DEFB1	P60022	68 aa		12.96	□□□□□ -0.34
CACNA1A-238	ENST00000637276		B5MCH6	92 aa		12.96	□□□□□ -0.34
CACNA1A-238	ENST00000637276		Q6ZRM9	215 aa		12.96	□□□□□ -0.34
CACNA1A-238	ENST00000637276	MRPL36	Q9P0J6	103 aa	Known RBP	12.95	□□□□□ -0.34
CACNA1A-238	ENST00000637276	TMEM14B	Q9NUH8	114 aa		12.95	□□□□□ -0.34
CACNA1A-238	ENST00000637276	COL24A1	Q17RW2	1714 aa		12.95	□□□□□ -0.34
CACNA1A-238	ENST00000637276	C9orf66	Q5T8R8	295 aa		12.95	□□□□□ -0.34
CACNA1A-238	ENST00000637276		Q6ZVH6	145 aa		12.95	□□□□□ -0.34
CACNA1A-238	ENST00000637276	TNS1	Q9HBL0	1735 aa	Known RBP	12.95	□□□□□ -0.34
CACNA1A-238	ENST00000637276	COX7A2L	O14548	114 aa		12.95	□□□□□ -0.34
CACNA1A-238	ENST00000637276	HERVK_113	P63121	156 aa		12.95	□□□□□ -0.34
CACNA1A-238	ENST00000637276	IGKV1D-37	A0A075B6S9	117 aa		12.94	□□□□□ -0.34
CACNA1A-238	ENST00000637276	LY6G6C	O95867	125 aa		12.94	□□□□□ -0.34
CACNA1A-238	ENST00000637276	NMS	Q5H8A3	153 aa		12.94	□□□□□ -0.34
CACNA1A-238	ENST00000637276	SHANK2-AS3	Q9BTD1	123 aa		12.94	□□□□□ -0.34
CACNA1A-238	ENST00000637276	MRPL53	Q96EL3	112 aa	Known RBP	12.94	□□□□□ -0.34
CACNA1A-238	ENST00000637276	RHOH	Q15669	191 aa		12.93	□□□□□ -0.34
CACNA1A-238	ENST00000637276	PRR25	Q96S07	402 aa		12.93	□□□□□ -0.34
CACNA1A-238	ENST00000637276	TMEM61	Q8N0U2	210 aa		12.93	□□□□□ -0.34
CACNA1A-238	ENST00000637276	TRAV26-1	A0A087WT03	109 aa		12.93	□□□□□ -0.34
CACNA1A-238	ENST00000637276	PSMB8	P28062	276 aa		12.92	□□□□□ -0.34
CACNA1A-238	ENST00000637276	ZNF491	Q8N8L2	437 aa		12.92	□□□□□ -0.34
CACNA1A-238	ENST00000637276	ZFP2	Q6ZN57	461 aa		12.92	□□□□□ -0.34
CACNA1A-238	ENST00000637276	C3orf22	Q8N5N4	141 aa		12.92	□□□□□ -0.34
CACNA1A-238	ENST00000637276	TICRR	Q7Z2Z1	1910 aa		12.92	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms